Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1461 and Dsui_1462 overlap by 4 nucleotides Dsui_1462 and Dsui_1463 are separated by 107 nucleotides
Dsui_1461: Dsui_1461 - RND family efflux transporter, MFP subunit, at 1,520,429 to 1,521,598
_1461
Dsui_1462: Dsui_1462 - ABC-type antimicrobial peptide transport system, ATPase component, at 1,521,595 to 1,522,398
_1462
Dsui_1463: Dsui_1463 - transcriptional activator of acetoin/glycerol metabolism, at 1,522,506 to 1,524,446
_1463
Position (kb)
1521
1522
1523 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1520.622 kb on + strand, within Dsui_1461 at 1520.627 kb on + strand, within Dsui_1461 at 1520.628 kb on - strand, within Dsui_1461 at 1520.630 kb on - strand, within Dsui_1461 at 1520.635 kb on - strand at 1520.714 kb on - strand at 1520.779 kb on + strand, within Dsui_1461 at 1520.787 kb on - strand, within Dsui_1461 at 1520.851 kb on + strand, within Dsui_1461 at 1520.951 kb on + strand, within Dsui_1461 at 1520.995 kb on - strand, within Dsui_1461 at 1521.016 kb on - strand, within Dsui_1461 at 1521.036 kb on - strand at 1521.128 kb on - strand, within Dsui_1461 at 1521.145 kb on - strand, within Dsui_1461 at 1521.147 kb on + strand, within Dsui_1461 at 1521.163 kb on + strand, within Dsui_1461 at 1521.170 kb on - strand, within Dsui_1461 at 1521.272 kb on + strand, within Dsui_1461 at 1521.360 kb on - strand, within Dsui_1461 at 1521.396 kb on + strand, within Dsui_1461 at 1521.577 kb on + strand at 1521.869 kb on + strand, within Dsui_1462 at 1522.292 kb on - strand, within Dsui_1462 at 1522.530 kb on + strand at 1522.558 kb on - strand at 1522.671 kb on - strand at 1522.845 kb on - strand at 1522.871 kb on + strand, within Dsui_1463 at 1522.880 kb on - strand, within Dsui_1463 at 1522.995 kb on - strand, within Dsui_1463 at 1523.035 kb on + strand, within Dsui_1463 at 1523.241 kb on + strand at 1523.348 kb on - strand, within Dsui_1463 at 1523.360 kb on + strand, within Dsui_1463 at 1523.379 kb on - strand, within Dsui_1463
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,520,622 + Dsui_1461 0.16 +1.9 1,520,627 + Dsui_1461 0.17 +0.8 1,520,628 - Dsui_1461 0.17 +0.5 1,520,630 - Dsui_1461 0.17 +0.4 1,520,635 - -0.3 1,520,714 - -0.1 1,520,779 + Dsui_1461 0.30 +0.6 1,520,787 - Dsui_1461 0.31 -0.5 1,520,851 + Dsui_1461 0.36 +0.5 1,520,951 + Dsui_1461 0.45 +0.9 1,520,995 - Dsui_1461 0.48 -0.8 1,521,016 - Dsui_1461 0.50 +0.2 1,521,036 - -1.2 1,521,128 - Dsui_1461 0.60 -0.7 1,521,145 - Dsui_1461 0.61 +0.5 1,521,147 + Dsui_1461 0.61 +0.9 1,521,163 + Dsui_1461 0.63 +0.1 1,521,170 - Dsui_1461 0.63 -0.3 1,521,272 + Dsui_1461 0.72 +1.3 1,521,360 - Dsui_1461 0.80 +0.3 1,521,396 + Dsui_1461 0.83 +0.1 1,521,577 + +0.8 1,521,869 + Dsui_1462 0.34 +1.6 1,522,292 - Dsui_1462 0.87 +0.6 1,522,530 + -0.0 1,522,558 - +0.6 1,522,671 - +0.8 1,522,845 - +0.7 1,522,871 + Dsui_1463 0.19 -0.1 1,522,880 - Dsui_1463 0.19 +1.4 1,522,995 - Dsui_1463 0.25 +1.1 1,523,035 + Dsui_1463 0.27 +0.5 1,523,241 + -4.0 1,523,348 - Dsui_1463 0.43 +0.9 1,523,360 + Dsui_1463 0.44 -0.2 1,523,379 - Dsui_1463 0.45 -0.4
Or see this region's nucleotide sequence