Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1370 and Dsui_1371 are separated by 103 nucleotides Dsui_1371 and Dsui_1372 are separated by 9 nucleotides
Dsui_1370: Dsui_1370 - putative permease, DMT superfamily, at 1,423,349 to 1,424,251
_1370
Dsui_1371: Dsui_1371 - transcriptional regulator, at 1,424,355 to 1,425,254
_1371
Dsui_1372: Dsui_1372 - methyl-accepting chemotaxis protein, at 1,425,264 to 1,426,883
_1372
Position (kb)
1424
1425
1426 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1423.369 kb on + strand at 1423.472 kb on - strand at 1423.496 kb on + strand, within Dsui_1370 at 1423.557 kb on + strand at 1423.565 kb on - strand, within Dsui_1370 at 1423.569 kb on - strand, within Dsui_1370 at 1423.613 kb on - strand, within Dsui_1370 at 1423.641 kb on - strand, within Dsui_1370 at 1423.772 kb on - strand at 1423.828 kb on - strand at 1423.943 kb on + strand, within Dsui_1370 at 1423.953 kb on + strand, within Dsui_1370 at 1423.966 kb on - strand, within Dsui_1370 at 1423.971 kb on - strand, within Dsui_1370 at 1424.107 kb on + strand, within Dsui_1370 at 1424.135 kb on + strand at 1424.156 kb on - strand at 1424.164 kb on + strand at 1424.258 kb on + strand at 1424.286 kb on - strand at 1424.289 kb on + strand at 1424.444 kb on - strand at 1424.457 kb on + strand, within Dsui_1371 at 1424.638 kb on + strand, within Dsui_1371 at 1424.638 kb on + strand, within Dsui_1371 at 1424.646 kb on - strand at 1424.684 kb on - strand, within Dsui_1371 at 1424.707 kb on + strand, within Dsui_1371 at 1424.730 kb on + strand, within Dsui_1371 at 1424.866 kb on - strand, within Dsui_1371 at 1424.900 kb on + strand, within Dsui_1371 at 1424.921 kb on - strand, within Dsui_1371 at 1424.958 kb on + strand, within Dsui_1371 at 1424.966 kb on - strand, within Dsui_1371 at 1425.040 kb on + strand, within Dsui_1371 at 1425.056 kb on - strand, within Dsui_1371 at 1425.060 kb on + strand, within Dsui_1371 at 1425.138 kb on - strand, within Dsui_1371 at 1425.142 kb on - strand at 1425.210 kb on + strand at 1425.210 kb on + strand at 1425.210 kb on + strand at 1425.218 kb on - strand at 1425.304 kb on - strand at 1425.416 kb on - strand at 1425.446 kb on + strand, within Dsui_1372 at 1425.484 kb on + strand, within Dsui_1372 at 1425.558 kb on - strand, within Dsui_1372 at 1425.580 kb on - strand, within Dsui_1372 at 1425.584 kb on + strand, within Dsui_1372 at 1425.614 kb on - strand, within Dsui_1372 at 1425.618 kb on + strand, within Dsui_1372 at 1425.742 kb on + strand at 1425.848 kb on - strand at 1425.872 kb on - strand, within Dsui_1372 at 1425.881 kb on - strand, within Dsui_1372 at 1425.995 kb on - strand, within Dsui_1372 at 1426.055 kb on + strand, within Dsui_1372
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,423,369 + +0.2 1,423,472 - +0.1 1,423,496 + Dsui_1370 0.16 -0.8 1,423,557 + +2.3 1,423,565 - Dsui_1370 0.24 -1.3 1,423,569 - Dsui_1370 0.24 +0.8 1,423,613 - Dsui_1370 0.29 -0.9 1,423,641 - Dsui_1370 0.32 -1.7 1,423,772 - +2.4 1,423,828 - -0.1 1,423,943 + Dsui_1370 0.66 -0.4 1,423,953 + Dsui_1370 0.67 -0.3 1,423,966 - Dsui_1370 0.68 -0.6 1,423,971 - Dsui_1370 0.69 -0.4 1,424,107 + Dsui_1370 0.84 -1.9 1,424,135 + +2.1 1,424,156 - -2.8 1,424,164 + -0.7 1,424,258 + -0.4 1,424,286 - -1.6 1,424,289 + -0.5 1,424,444 - -0.5 1,424,457 + Dsui_1371 0.11 +1.5 1,424,638 + Dsui_1371 0.31 +0.9 1,424,638 + Dsui_1371 0.31 +3.1 1,424,646 - -1.9 1,424,684 - Dsui_1371 0.37 +0.1 1,424,707 + Dsui_1371 0.39 +0.2 1,424,730 + Dsui_1371 0.42 +1.0 1,424,866 - Dsui_1371 0.57 +0.7 1,424,900 + Dsui_1371 0.61 +0.8 1,424,921 - Dsui_1371 0.63 +1.1 1,424,958 + Dsui_1371 0.67 +0.9 1,424,966 - Dsui_1371 0.68 +1.2 1,425,040 + Dsui_1371 0.76 +0.6 1,425,056 - Dsui_1371 0.78 -0.2 1,425,060 + Dsui_1371 0.78 +1.4 1,425,138 - Dsui_1371 0.87 +1.2 1,425,142 - +2.1 1,425,210 + +1.1 1,425,210 + +3.8 1,425,210 + +1.2 1,425,218 - +1.7 1,425,304 - +1.5 1,425,416 - +0.9 1,425,446 + Dsui_1372 0.11 +0.4 1,425,484 + Dsui_1372 0.14 -1.1 1,425,558 - Dsui_1372 0.18 +1.3 1,425,580 - Dsui_1372 0.20 +0.6 1,425,584 + Dsui_1372 0.20 +1.1 1,425,614 - Dsui_1372 0.22 +1.4 1,425,618 + Dsui_1372 0.22 +1.7 1,425,742 + -3.6 1,425,848 - -1.7 1,425,872 - Dsui_1372 0.38 +0.8 1,425,881 - Dsui_1372 0.38 +1.3 1,425,995 - Dsui_1372 0.45 -2.3 1,426,055 + Dsui_1372 0.49 +0.4
Or see this region's nucleotide sequence