Strain Fitness in Dechlorosoma suillum PS around Dsui_1308

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1306 and Dsui_1307 are separated by 67 nucleotidesDsui_1307 and Dsui_1308 are separated by 32 nucleotidesDsui_1308 and Dsui_1309 overlap by 1 nucleotidesDsui_1309 and Dsui_1310 are separated by 97 nucleotides Dsui_1306: Dsui_1306 - delta-aminolevulinic acid dehydratase, at 1,367,859 to 1,368,869 _1306 Dsui_1307: Dsui_1307 - transcriptional regulator, at 1,368,937 to 1,369,533 _1307 Dsui_1308: Dsui_1308 - pyrimidine 5''-nucleotidase, at 1,369,566 to 1,370,243 _1308 Dsui_1309: Dsui_1309 - acetylglutamate kinase, at 1,370,243 to 1,371,124 _1309 Dsui_1310: Dsui_1310 - molecular chaperone (small heat shock protein), at 1,371,222 to 1,371,653 _1310 Position (kb) 1369 1370 1371Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1368.954 kb on + strandat 1369.067 kb on - strand, within Dsui_1307at 1369.209 kb on - strand, within Dsui_1307at 1369.221 kb on + strand, within Dsui_1307at 1369.248 kb on + strand, within Dsui_1307at 1369.285 kb on - strand, within Dsui_1307at 1369.372 kb on + strand, within Dsui_1307at 1369.372 kb on + strand, within Dsui_1307at 1369.380 kb on - strand, within Dsui_1307at 1369.380 kb on - strand, within Dsui_1307at 1369.418 kb on - strand, within Dsui_1307at 1369.460 kb on + strand, within Dsui_1307at 1369.468 kb on - strand, within Dsui_1307at 1369.468 kb on - strand, within Dsui_1307at 1369.529 kb on + strandat 1369.537 kb on + strandat 1369.547 kb on - strandat 1369.582 kb on + strandat 1369.590 kb on - strandat 1369.590 kb on - strandat 1369.616 kb on + strandat 1369.693 kb on + strand, within Dsui_1308at 1369.716 kb on + strand, within Dsui_1308at 1369.751 kb on - strand, within Dsui_1308at 1369.875 kb on - strand, within Dsui_1308at 1369.881 kb on - strand, within Dsui_1308at 1369.881 kb on - strand, within Dsui_1308at 1369.881 kb on - strand, within Dsui_1308at 1370.180 kb on - strandat 1370.235 kb on - strandat 1371.192 kb on + strandat 1371.220 kb on + strandat 1371.222 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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1,368,954 + +1.0
1,369,067 - Dsui_1307 0.22 -0.1
1,369,209 - Dsui_1307 0.46 +0.8
1,369,221 + Dsui_1307 0.48 +0.3
1,369,248 + Dsui_1307 0.52 -0.6
1,369,285 - Dsui_1307 0.58 +0.9
1,369,372 + Dsui_1307 0.73 +1.1
1,369,372 + Dsui_1307 0.73 +0.2
1,369,380 - Dsui_1307 0.74 +1.6
1,369,380 - Dsui_1307 0.74 +0.8
1,369,418 - Dsui_1307 0.81 +0.4
1,369,460 + Dsui_1307 0.88 -0.4
1,369,468 - Dsui_1307 0.89 +1.4
1,369,468 - Dsui_1307 0.89 +0.8
1,369,529 + +0.7
1,369,537 + +0.7
1,369,547 - +1.0
1,369,582 + +1.6
1,369,590 - +1.2
1,369,590 - +1.5
1,369,616 + +0.8
1,369,693 + Dsui_1308 0.19 +0.6
1,369,716 + Dsui_1308 0.22 -0.9
1,369,751 - Dsui_1308 0.27 +1.5
1,369,875 - Dsui_1308 0.46 +1.1
1,369,881 - Dsui_1308 0.46 +1.6
1,369,881 - Dsui_1308 0.46 +1.3
1,369,881 - Dsui_1308 0.46 +0.7
1,370,180 - +1.0
1,370,235 - -4.7
1,371,192 + -2.8
1,371,220 + -1.4
1,371,222 - +0.9

Or see this region's nucleotide sequence