Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1306 and Dsui_1307 are separated by 67 nucleotides Dsui_1307 and Dsui_1308 are separated by 32 nucleotides Dsui_1308 and Dsui_1309 overlap by 1 nucleotides Dsui_1309 and Dsui_1310 are separated by 97 nucleotides
Dsui_1306: Dsui_1306 - delta-aminolevulinic acid dehydratase, at 1,367,859 to 1,368,869
_1306
Dsui_1307: Dsui_1307 - transcriptional regulator, at 1,368,937 to 1,369,533
_1307
Dsui_1308: Dsui_1308 - pyrimidine 5''-nucleotidase, at 1,369,566 to 1,370,243
_1308
Dsui_1309: Dsui_1309 - acetylglutamate kinase, at 1,370,243 to 1,371,124
_1309
Dsui_1310: Dsui_1310 - molecular chaperone (small heat shock protein), at 1,371,222 to 1,371,653
_1310
Position (kb)
1369
1370
1371 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1368.954 kb on + strand at 1369.067 kb on - strand, within Dsui_1307 at 1369.209 kb on - strand, within Dsui_1307 at 1369.221 kb on + strand, within Dsui_1307 at 1369.248 kb on + strand, within Dsui_1307 at 1369.285 kb on - strand, within Dsui_1307 at 1369.372 kb on + strand, within Dsui_1307 at 1369.372 kb on + strand, within Dsui_1307 at 1369.380 kb on - strand, within Dsui_1307 at 1369.380 kb on - strand, within Dsui_1307 at 1369.418 kb on - strand, within Dsui_1307 at 1369.460 kb on + strand, within Dsui_1307 at 1369.468 kb on - strand, within Dsui_1307 at 1369.468 kb on - strand, within Dsui_1307 at 1369.529 kb on + strand at 1369.537 kb on + strand at 1369.547 kb on - strand at 1369.582 kb on + strand at 1369.590 kb on - strand at 1369.590 kb on - strand at 1369.616 kb on + strand at 1369.693 kb on + strand, within Dsui_1308 at 1369.716 kb on + strand, within Dsui_1308 at 1369.751 kb on - strand, within Dsui_1308 at 1369.875 kb on - strand, within Dsui_1308 at 1369.881 kb on - strand, within Dsui_1308 at 1369.881 kb on - strand, within Dsui_1308 at 1369.881 kb on - strand, within Dsui_1308 at 1370.180 kb on - strand at 1370.235 kb on - strand at 1371.192 kb on + strand at 1371.220 kb on + strand at 1371.222 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,368,954 + +1.0 1,369,067 - Dsui_1307 0.22 -0.1 1,369,209 - Dsui_1307 0.46 +0.8 1,369,221 + Dsui_1307 0.48 +0.3 1,369,248 + Dsui_1307 0.52 -0.6 1,369,285 - Dsui_1307 0.58 +0.9 1,369,372 + Dsui_1307 0.73 +1.1 1,369,372 + Dsui_1307 0.73 +0.2 1,369,380 - Dsui_1307 0.74 +1.6 1,369,380 - Dsui_1307 0.74 +0.8 1,369,418 - Dsui_1307 0.81 +0.4 1,369,460 + Dsui_1307 0.88 -0.4 1,369,468 - Dsui_1307 0.89 +1.4 1,369,468 - Dsui_1307 0.89 +0.8 1,369,529 + +0.7 1,369,537 + +0.7 1,369,547 - +1.0 1,369,582 + +1.6 1,369,590 - +1.2 1,369,590 - +1.5 1,369,616 + +0.8 1,369,693 + Dsui_1308 0.19 +0.6 1,369,716 + Dsui_1308 0.22 -0.9 1,369,751 - Dsui_1308 0.27 +1.5 1,369,875 - Dsui_1308 0.46 +1.1 1,369,881 - Dsui_1308 0.46 +1.6 1,369,881 - Dsui_1308 0.46 +1.3 1,369,881 - Dsui_1308 0.46 +0.7 1,370,180 - +1.0 1,370,235 - -4.7 1,371,192 + -2.8 1,371,220 + -1.4 1,371,222 - +0.9
Or see this region's nucleotide sequence