Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1095 and Dsui_1096 are separated by 265 nucleotides Dsui_1096 and Dsui_1097 are separated by 0 nucleotides
Dsui_1095: Dsui_1095 - 3-dehydroquinate synthase, at 1,133,903 to 1,134,997
_1095
Dsui_1096: Dsui_1096 - glutamate synthase family protein, at 1,135,263 to 1,139,960
_1096
Dsui_1097: Dsui_1097 - NADH/NADPH-dependent glutamate synthase small subunit, at 1,139,961 to 1,141,427
_1097
Position (kb)
1135
1136
1137
1138
1139
1140 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1135.017 kb on + strand at 1135.038 kb on - strand at 1135.038 kb on - strand at 1135.088 kb on - strand at 1135.112 kb on - strand at 1135.148 kb on + strand at 1135.181 kb on - strand at 1135.265 kb on + strand at 1135.265 kb on + strand at 1135.265 kb on + strand at 1135.270 kb on + strand at 1135.273 kb on - strand at 1135.273 kb on - strand at 1135.449 kb on - strand at 1135.566 kb on - strand at 1135.847 kb on + strand, within Dsui_1096 at 1135.883 kb on + strand, within Dsui_1096 at 1135.914 kb on + strand, within Dsui_1096 at 1135.932 kb on - strand, within Dsui_1096 at 1135.999 kb on - strand, within Dsui_1096 at 1136.010 kb on - strand, within Dsui_1096 at 1136.020 kb on - strand, within Dsui_1096 at 1136.056 kb on - strand, within Dsui_1096 at 1136.143 kb on - strand, within Dsui_1096 at 1136.162 kb on + strand, within Dsui_1096 at 1136.228 kb on + strand, within Dsui_1096 at 1136.535 kb on + strand, within Dsui_1096 at 1136.591 kb on + strand, within Dsui_1096 at 1136.591 kb on + strand, within Dsui_1096 at 1136.599 kb on - strand, within Dsui_1096 at 1136.599 kb on - strand, within Dsui_1096 at 1136.746 kb on - strand, within Dsui_1096 at 1136.789 kb on + strand, within Dsui_1096 at 1136.896 kb on + strand, within Dsui_1096 at 1136.933 kb on - strand at 1137.065 kb on + strand, within Dsui_1096 at 1137.193 kb on + strand, within Dsui_1096 at 1137.214 kb on + strand, within Dsui_1096 at 1137.245 kb on - strand at 1137.440 kb on - strand at 1137.443 kb on + strand, within Dsui_1096 at 1137.598 kb on - strand, within Dsui_1096 at 1137.641 kb on - strand, within Dsui_1096 at 1137.763 kb on + strand, within Dsui_1096 at 1137.769 kb on - strand, within Dsui_1096 at 1137.770 kb on - strand, within Dsui_1096 at 1137.814 kb on + strand, within Dsui_1096 at 1138.021 kb on - strand, within Dsui_1096 at 1138.114 kb on + strand, within Dsui_1096 at 1138.211 kb on + strand, within Dsui_1096 at 1138.441 kb on + strand, within Dsui_1096 at 1138.546 kb on - strand, within Dsui_1096 at 1138.602 kb on + strand, within Dsui_1096 at 1138.649 kb on + strand, within Dsui_1096 at 1138.649 kb on + strand, within Dsui_1096 at 1138.916 kb on + strand, within Dsui_1096 at 1138.948 kb on + strand, within Dsui_1096 at 1138.975 kb on + strand, within Dsui_1096 at 1139.036 kb on - strand, within Dsui_1096 at 1139.093 kb on + strand, within Dsui_1096 at 1139.101 kb on - strand at 1139.279 kb on + strand, within Dsui_1096 at 1139.426 kb on - strand, within Dsui_1096 at 1139.431 kb on - strand, within Dsui_1096 at 1139.439 kb on + strand, within Dsui_1096 at 1139.445 kb on - strand, within Dsui_1096 at 1139.488 kb on + strand, within Dsui_1096 at 1139.488 kb on + strand, within Dsui_1096 at 1139.515 kb on - strand at 1139.679 kb on - strand at 1139.745 kb on - strand at 1139.786 kb on + strand at 1139.786 kb on + strand at 1139.792 kb on - strand at 1139.794 kb on - strand at 1139.798 kb on + strand at 1139.832 kb on - strand at 1139.949 kb on - strand at 1140.018 kb on + strand at 1140.029 kb on + strand at 1140.323 kb on + strand, within Dsui_1097 at 1140.370 kb on - strand at 1140.377 kb on + strand, within Dsui_1097 at 1140.539 kb on + strand, within Dsui_1097 at 1140.656 kb on + strand, within Dsui_1097 at 1140.829 kb on - strand, within Dsui_1097 at 1140.934 kb on - strand, within Dsui_1097
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,135,017 + +0.8 1,135,038 - -0.2 1,135,038 - +0.6 1,135,088 - +0.6 1,135,112 - -0.1 1,135,148 + +1.2 1,135,181 - -1.0 1,135,265 + -1.9 1,135,265 + -0.6 1,135,265 + +1.0 1,135,270 + -0.6 1,135,273 - -1.9 1,135,273 - -0.0 1,135,449 - -2.0 1,135,566 - -1.6 1,135,847 + Dsui_1096 0.12 -1.0 1,135,883 + Dsui_1096 0.13 +1.0 1,135,914 + Dsui_1096 0.14 -0.0 1,135,932 - Dsui_1096 0.14 -0.6 1,135,999 - Dsui_1096 0.16 -0.6 1,136,010 - Dsui_1096 0.16 -0.6 1,136,020 - Dsui_1096 0.16 -0.0 1,136,056 - Dsui_1096 0.17 +1.0 1,136,143 - Dsui_1096 0.19 -0.0 1,136,162 + Dsui_1096 0.19 -1.0 1,136,228 + Dsui_1096 0.21 -1.4 1,136,535 + Dsui_1096 0.27 -3.0 1,136,591 + Dsui_1096 0.28 +1.0 1,136,591 + Dsui_1096 0.28 -1.4 1,136,599 - Dsui_1096 0.28 +1.0 1,136,599 - Dsui_1096 0.28 -1.4 1,136,746 - Dsui_1096 0.32 -1.4 1,136,789 + Dsui_1096 0.32 -0.0 1,136,896 + Dsui_1096 0.35 -0.0 1,136,933 - -0.6 1,137,065 + Dsui_1096 0.38 -1.0 1,137,193 + Dsui_1096 0.41 -1.9 1,137,214 + Dsui_1096 0.42 +1.0 1,137,245 - +1.0 1,137,440 - +1.0 1,137,443 + Dsui_1096 0.46 -1.0 1,137,598 - Dsui_1096 0.50 -1.0 1,137,641 - Dsui_1096 0.51 -2.2 1,137,763 + Dsui_1096 0.53 -1.0 1,137,769 - Dsui_1096 0.53 -0.6 1,137,770 - Dsui_1096 0.53 -1.4 1,137,814 + Dsui_1096 0.54 -0.0 1,138,021 - Dsui_1096 0.59 -3.0 1,138,114 + Dsui_1096 0.61 -1.4 1,138,211 + Dsui_1096 0.63 -0.6 1,138,441 + Dsui_1096 0.68 -2.0 1,138,546 - Dsui_1096 0.70 +1.0 1,138,602 + Dsui_1096 0.71 -0.0 1,138,649 + Dsui_1096 0.72 +0.4 1,138,649 + Dsui_1096 0.72 +1.0 1,138,916 + Dsui_1096 0.78 -2.9 1,138,948 + Dsui_1096 0.78 +1.0 1,138,975 + Dsui_1096 0.79 +1.0 1,139,036 - Dsui_1096 0.80 -1.9 1,139,093 + Dsui_1096 0.82 +1.0 1,139,101 - +1.0 1,139,279 + Dsui_1096 0.85 +1.0 1,139,426 - Dsui_1096 0.89 -2.4 1,139,431 - Dsui_1096 0.89 -1.0 1,139,439 + Dsui_1096 0.89 -2.0 1,139,445 - Dsui_1096 0.89 -1.4 1,139,488 + Dsui_1096 0.90 -0.0 1,139,488 + Dsui_1096 0.90 +1.0 1,139,515 - -2.4 1,139,679 - -1.0 1,139,745 - -0.0 1,139,786 + -1.0 1,139,786 + -0.6 1,139,792 - -0.0 1,139,794 - -1.4 1,139,798 + -0.6 1,139,832 - -1.4 1,139,949 - -1.6 1,140,018 + -3.0 1,140,029 + +1.0 1,140,323 + Dsui_1097 0.25 -2.5 1,140,370 - +1.0 1,140,377 + Dsui_1097 0.28 -0.0 1,140,539 + Dsui_1097 0.39 -0.6 1,140,656 + Dsui_1097 0.47 -0.6 1,140,829 - Dsui_1097 0.59 -0.6 1,140,934 - Dsui_1097 0.66 -0.0
Or see this region's nucleotide sequence