Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0701 and Dsui_0702 overlap by 32 nucleotides Dsui_0702 and Dsui_0703 are separated by 155 nucleotides Dsui_0703 and Dsui_0704 are separated by 14 nucleotides
Dsui_0701: Dsui_0701 - serine kinase of the HPr protein, regulates carbohydrate metabolism, at 696,888 to 697,823
_0701
Dsui_0702: Dsui_0702 - PTS IIA-like nitrogen-regulatory protein PtsN, at 697,792 to 698,277
_0702
Dsui_0703: Dsui_0703 - ribosomal subunit interface protein, at 698,433 to 698,753
_0703
Dsui_0704: Dsui_0704 - RNA polymerase sigma-54 factor, at 698,768 to 700,246
_0704
Position (kb) 698
699 Strain fitness (log2 ratio) -8
-7
-6
-5
-4
-3
-2
-1
0
1 at 698.421 kb on - strand at 698.479 kb on - strand, within Dsui_0703 at 698.493 kb on + strand, within Dsui_0703 at 698.613 kb on - strand, within Dsui_0703 at 698.613 kb on - strand, within Dsui_0703 at 698.640 kb on - strand, within Dsui_0703 at 698.647 kb on - strand, within Dsui_0703 at 698.676 kb on - strand, within Dsui_0703 at 698.719 kb on + strand, within Dsui_0703 at 698.802 kb on - strand at 698.816 kb on + strand at 698.837 kb on + strand at 698.847 kb on - strand at 698.850 kb on - strand at 699.035 kb on - strand, within Dsui_0704 at 699.035 kb on - strand, within Dsui_0704 at 699.058 kb on + strand, within Dsui_0704 at 699.081 kb on - strand, within Dsui_0704 at 699.081 kb on - strand, within Dsui_0704 at 699.081 kb on - strand, within Dsui_0704 at 699.226 kb on + strand at 699.356 kb on - strand, within Dsui_0704 at 699.417 kb on - strand, within Dsui_0704 at 699.442 kb on - strand, within Dsui_0704 at 699.493 kb on + strand, within Dsui_0704 at 699.511 kb on - strand, within Dsui_0704 at 699.609 kb on - strand, within Dsui_0704 at 699.678 kb on - strand, within Dsui_0704 at 699.683 kb on - strand, within Dsui_0704 at 699.709 kb on - strand, within Dsui_0704
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 698,421 - -0.9 698,479 - Dsui_0703 0.14 -2.1 698,493 + Dsui_0703 0.19 -4.9 698,613 - Dsui_0703 0.56 -1.7 698,613 - Dsui_0703 0.56 -3.5 698,640 - Dsui_0703 0.64 -3.1 698,647 - Dsui_0703 0.67 -2.8 698,676 - Dsui_0703 0.76 -2.6 698,719 + Dsui_0703 0.89 -5.7 698,802 - -3.0 698,816 + -4.5 698,837 + -4.2 698,847 - -8.4 698,850 - -6.4 699,035 - Dsui_0704 0.18 -3.6 699,035 - Dsui_0704 0.18 -4.7 699,058 + Dsui_0704 0.20 -5.3 699,081 - Dsui_0704 0.21 -5.3 699,081 - Dsui_0704 0.21 -6.7 699,081 - Dsui_0704 0.21 -5.1 699,226 + -0.8 699,356 - Dsui_0704 0.40 -1.6 699,417 - Dsui_0704 0.44 -3.4 699,442 - Dsui_0704 0.46 -5.5 699,493 + Dsui_0704 0.49 -5.3 699,511 - Dsui_0704 0.50 -4.6 699,609 - Dsui_0704 0.57 -4.4 699,678 - Dsui_0704 0.62 -7.7 699,683 - Dsui_0704 0.62 -5.1 699,709 - Dsui_0704 0.64 -5.9
Or see this region's nucleotide sequence