Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_09740

Experiment: ICP1_phage_0.23_MOI_rep2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ICP1_phage_0.23_MOI_rep2
2,096,197	-		CSW01_09735	0.27	-0.3
2,096,226	+		CSW01_09735	0.30	-0.3
2,096,247	+		CSW01_09735	0.32	-1.9
2,096,278	-		CSW01_09735	0.35	-1.2
2,096,278	-		CSW01_09735	0.35	-0.4
2,096,280	+		CSW01_09735	0.36	+0.7
2,096,288	-		CSW01_09735	0.37	+1.4
2,096,334	-		CSW01_09735	0.42	-0.1
2,096,387	-		CSW01_09735	0.47	-1.2
2,096,475	+		CSW01_09735	0.57	+1.3
2,096,495	+		CSW01_09735	0.59	-2.7
2,096,505	+		CSW01_09735	0.60	-2.4
2,096,581	+		CSW01_09735	0.68	+0.3
2,096,599	-		CSW01_09735	0.70	+1.7
2,096,645	-		CSW01_09735	0.75	-1.4
2,096,645	-		CSW01_09735	0.75	-1.0
2,096,650	-		CSW01_09735	0.75	-3.1
2,096,708	-		CSW01_09735	0.82	+1.3
2,096,720	+		CSW01_09735	0.83	-3.4
2,096,722	+		CSW01_09735	0.83	+0.7
2,096,727	+		CSW01_09735	0.84	-2.0
2,096,728	-		CSW01_09735	0.84	+0.5
2,096,728	-		CSW01_09735	0.84	-2.4
2,096,728	-		CSW01_09735	0.84	-1.6
2,096,730	+		CSW01_09735	0.84	+0.5
2,096,739	+		CSW01_09735	0.85	+0.9
2,096,739	+		CSW01_09735	0.85	+1.1
2,096,739	+		CSW01_09735	0.85	-0.1
2,096,739	+		CSW01_09735	0.85	+2.3
2,096,739	+		CSW01_09735	0.85	+0.2
2,096,739	+		CSW01_09735	0.85	-0.6
2,096,739	+		CSW01_09735	0.85	+0.9
2,096,739	+		CSW01_09735	0.85	-2.6
2,096,739	+		CSW01_09735	0.85	-0.0
2,096,739	+		CSW01_09735	0.85	-2.6
2,096,739	+		CSW01_09735	0.85	-1.3
2,096,739	+		CSW01_09735	0.85	+0.8
2,096,739	+		CSW01_09735	0.85	-0.7
2,096,739	+		CSW01_09735	0.85	-1.7
2,096,740	-		CSW01_09735	0.85	+1.5
2,096,746	-		CSW01_09735	0.86	+0.5
2,096,747	-		CSW01_09735	0.86	+0.2
2,096,747	-		CSW01_09735	0.86	-3.7
2,096,747	-		CSW01_09735	0.86	+0.3
2,096,747	-		CSW01_09735	0.86	+1.0
2,096,747	-		CSW01_09735	0.86	+0.3
2,096,747	-		CSW01_09735	0.86	-0.9
2,096,747	-		CSW01_09735	0.86	-2.6
2,096,747	-		CSW01_09735	0.86	+0.5
2,096,747	-		CSW01_09735	0.86	-0.5
2,096,747	-		CSW01_09735	0.86	+1.2
2,096,747	-		CSW01_09735	0.86	+0.8
2,096,747	-		CSW01_09735	0.86	-1.8
2,096,747	-		CSW01_09735	0.86	-2.3
2,096,747	-		CSW01_09735	0.86	+0.3
2,096,747	-		CSW01_09735	0.86	-0.4
2,096,747	-		CSW01_09735	0.86	+1.2
2,096,747	-		CSW01_09735	0.86	+0.6
2,096,747	-		CSW01_09735	0.86	-0.4
2,096,747	-		CSW01_09735	0.86	-0.2
2,096,747	-		CSW01_09735	0.86	-0.5
2,096,749	+		CSW01_09735	0.86	+0.2
2,096,754	+		CSW01_09735	0.87	-1.7
2,096,755	+		CSW01_09735	0.87	-3.1
2,096,755	+		CSW01_09735	0.87	+0.5
2,096,756	+		CSW01_09735	0.87	-1.2
2,096,762	-		CSW01_09735	0.88	+0.7
2,096,763	-		CSW01_09735	0.88	-2.6
2,096,763	-		CSW01_09735	0.88	+0.0
2,096,791	-				-2.0
2,096,837	-				-0.3
2,096,837	-				+2.3
2,096,888	+				+0.5
2,096,888	+				+0.0
2,096,896	-				-1.5
2,096,901	-				-1.3
2,097,025	+				-1.4
2,097,030	+				-0.0
2,097,030	+				-1.7
2,097,033	-				-0.4
2,097,038	-				+0.6
2,097,045	+				+0.7
2,097,045	+				+0.4
2,097,047	+				+0.2
2,097,053	-				+0.5
2,097,053	-				-1.7
2,097,074	+		CSW01_09740	0.20	+0.0
2,097,090	-		CSW01_09740	0.28	+1.1
2,097,153	-		CSW01_09740	0.61	+0.0
2,097,153	-		CSW01_09740	0.61	-0.3
2,097,169	+		CSW01_09740	0.69	-0.4
2,097,230	-				+1.0
2,097,313	-				+0.0
2,097,359	+				+0.4
2,097,392	+		CSW01_09745	0.11	-2.9
2,097,392	+		CSW01_09745	0.11	-1.3
2,097,392	+		CSW01_09745	0.11	+2.0
2,097,392	+		CSW01_09745	0.11	+0.2
2,097,392	+		CSW01_09745	0.11	-3.5
2,097,392	+		CSW01_09745	0.11	-0.5
2,097,400	-		CSW01_09745	0.11	+0.1
2,097,400	-		CSW01_09745	0.11	-4.3
2,097,400	-		CSW01_09745	0.11	-1.4
2,097,400	-		CSW01_09745	0.11	-0.4
2,097,405	+		CSW01_09745	0.11	+0.5
2,097,407	-		CSW01_09745	0.11	+0.8
2,097,460	+		CSW01_09745	0.14	-1.5
2,097,460	-		CSW01_09745	0.14	-0.3
2,097,461	+		CSW01_09745	0.14	-0.1
2,097,468	-		CSW01_09745	0.15	+1.2
2,097,468	-		CSW01_09745	0.15	-1.7
2,097,468	-		CSW01_09745	0.15	-1.3
2,097,468	-		CSW01_09745	0.15	+0.6
2,097,468	-		CSW01_09745	0.15	-0.0
2,097,482	+		CSW01_09745	0.16	+1.4
2,097,482	+		CSW01_09745	0.16	-1.0
2,097,482	+		CSW01_09745	0.16	-2.6
2,097,490	-		CSW01_09745	0.16	+1.3
2,097,490	-		CSW01_09745	0.16	-2.2
2,097,524	+		CSW01_09745	0.18	+1.8
2,097,532	-		CSW01_09745	0.18	-0.2
2,097,540	+		CSW01_09745	0.19	+1.1
2,097,540	+		CSW01_09745	0.19	-0.2
2,097,540	+		CSW01_09745	0.19	+2.0
2,097,540	+		CSW01_09745	0.19	-2.9
2,097,548	-		CSW01_09745	0.19	-3.9
2,097,548	-		CSW01_09745	0.19	-0.3
2,097,550	+		CSW01_09745	0.19	+1.6
2,097,564	+		CSW01_09745	0.20	-1.6
2,097,564	+		CSW01_09745	0.20	-1.9
2,097,564	+		CSW01_09745	0.20	+0.8
2,097,574	+		CSW01_09745	0.21	+1.0
2,097,582	-		CSW01_09745	0.21	+0.9
2,097,686	-		CSW01_09745	0.27	+0.3
2,097,691	+		CSW01_09745	0.27	+0.0
2,097,699	+		CSW01_09745	0.27	-1.4
2,097,699	-		CSW01_09745	0.27	+0.6
2,097,699	-		CSW01_09745	0.27	-0.1
2,097,703	+		CSW01_09745	0.28	+0.7
2,097,706	-		CSW01_09745	0.28	-1.5
2,097,751	+		CSW01_09745	0.30	+0.1
2,097,819	+		CSW01_09745	0.34	-3.3
2,097,848	-		CSW01_09745	0.36	+0.5
2,097,852	+		CSW01_09745	0.36	-1.2
2,097,860	-		CSW01_09745	0.36	+0.0
2,097,869	+		CSW01_09745	0.37	-0.4
2,097,877	-		CSW01_09745	0.37	-0.2
2,097,886	+		CSW01_09745	0.38	+1.8
2,098,014	-		CSW01_09745	0.45	+0.1
2,098,019	-		CSW01_09745	0.45	+1.0
2,098,019	-		CSW01_09745	0.45	-0.6
2,098,019	-		CSW01_09745	0.45	+0.9
2,098,077	+		CSW01_09745	0.48	-0.1
2,098,114	+		CSW01_09745	0.50	-2.3
2,098,114	+		CSW01_09745	0.50	-1.9
2,098,114	+		CSW01_09745	0.50	+0.7
2,098,114	+		CSW01_09745	0.50	-1.5
2,098,114	+		CSW01_09745	0.50	-1.9
2,098,114	+		CSW01_09745	0.50	+0.9
2,098,114	+		CSW01_09745	0.50	+1.6
2,098,122	-		CSW01_09745	0.51	-1.5
2,098,122	-		CSW01_09745	0.51	-1.6
2,098,122	-		CSW01_09745	0.51	+1.1
2,098,122	-		CSW01_09745	0.51	-2.5
2,098,151	+		CSW01_09745	0.52	-1.3
2,098,158	+		CSW01_09745	0.53	+0.2
2,098,158	+		CSW01_09745	0.53	+0.3
2,098,158	+		CSW01_09745	0.53	-1.1
2,098,158	+		CSW01_09745	0.53	+0.7
2,098,158	+		CSW01_09745	0.53	-2.1
2,098,158	+		CSW01_09745	0.53	-3.2
2,098,158	+		CSW01_09745	0.53	-0.8
2,098,158	+		CSW01_09745	0.53	-1.5
2,098,166	-		CSW01_09745	0.53	+0.9
2,098,166	-		CSW01_09745	0.53	-0.7
2,098,166	-		CSW01_09745	0.53	-2.1
2,098,166	-		CSW01_09745	0.53	-2.2
2,098,166	-		CSW01_09745	0.53	+0.1
2,098,184	+		CSW01_09745	0.54	+0.0
2,098,192	-		CSW01_09745	0.54	-0.0