Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22980

Experiment: Choline Lysine 12 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 12 mM
5,045,741	+		AO353_22970	0.67	-0.6
5,045,741	+		AO353_22970	0.67	+1.4
5,045,741	+		AO353_22970	0.67	+0.1
5,045,741	+		AO353_22970	0.67	-0.6
5,045,741	+		AO353_22970	0.67	+0.9
5,045,741	+		AO353_22970	0.67	-0.9
5,045,741	+		AO353_22970	0.67	+0.4
5,045,742	-		AO353_22970	0.67	+1.4
5,045,742	-		AO353_22970	0.67	-0.0
5,045,742	-		AO353_22970	0.67	-1.6
5,045,742	-		AO353_22970	0.67	-2.6
5,045,742	-		AO353_22970	0.67	-1.7
5,045,742	-		AO353_22970	0.67	-0.1
5,045,742	-		AO353_22970	0.67	+0.4
5,045,742	-		AO353_22970	0.67	-1.2
5,045,742	-		AO353_22970	0.67	-0.8
5,045,742	-		AO353_22970	0.67	+2.4
5,045,814	-		AO353_22970	0.76	+0.7
5,045,814	-		AO353_22970	0.76	-0.1
5,045,873	+		AO353_22970	0.83	+0.2
5,045,874	-		AO353_22970	0.83	-1.0
5,045,909	+		AO353_22970	0.88	-1.0
5,045,909	+		AO353_22970	0.88	+0.4
5,045,909	+		AO353_22970	0.88	-0.1
5,045,910	-		AO353_22970	0.88	-0.7
5,045,910	-		AO353_22970	0.88	+0.5
5,045,933	+				-0.0
5,045,933	+				-1.2
5,045,934	-				+0.3
5,046,025	+				-0.8
5,046,042	-				-1.0
5,046,179	+		AO353_22975	0.17	+0.2
5,046,179	+		AO353_22975	0.17	+1.2
5,046,180	-		AO353_22975	0.17	-0.6
5,046,180	-		AO353_22975	0.17	-0.9
5,046,180	-		AO353_22975	0.17	+0.7
5,046,180	-		AO353_22975	0.17	+0.7
5,046,399	+		AO353_22975	0.62	+1.8
5,046,399	+		AO353_22975	0.62	+0.8
5,046,399	+		AO353_22975	0.62	+0.5
5,046,399	+		AO353_22975	0.62	+0.4
5,046,400	-		AO353_22975	0.62	+0.1
5,046,400	-		AO353_22975	0.62	-0.4
5,046,504	+				-0.3
5,046,505	-		AO353_22975	0.83	-1.4
5,046,631	-				+1.0
5,046,631	-				+0.4
5,046,644	+				-0.0
5,046,644	+				-0.3
5,046,644	+				-2.2
5,046,644	+				-1.0
5,046,644	+				+1.5
5,046,644	+				+0.0
5,046,645	-				-1.2
5,046,645	-				-1.0
5,046,739	-				+0.6
5,046,739	-				+0.4
5,046,739	-				+1.4
5,046,739	-				+0.5
5,046,843	+		AO353_22980	0.21	+1.4
5,046,843	+		AO353_22980	0.21	-1.2
5,046,844	-		AO353_22980	0.21	+0.8
5,046,844	-		AO353_22980	0.21	+0.6
5,046,877	+				+1.0
5,046,909	+		AO353_22980	0.34	-1.5
5,046,909	+		AO353_22980	0.34	+0.3
5,046,909	+		AO353_22980	0.34	-0.2
5,046,909	+		AO353_22980	0.34	+1.3
5,046,910	-		AO353_22980	0.34	+1.0
5,046,910	-		AO353_22980	0.34	+0.9
5,047,012	-		AO353_22980	0.55	+0.8
5,047,012	-		AO353_22980	0.55	-0.0
5,047,105	+		AO353_22980	0.74	-0.1
5,047,105	+		AO353_22980	0.74	+2.7
5,047,106	-		AO353_22980	0.74	-0.1
5,047,207	+				-0.9
5,047,207	+				-1.0
5,047,207	+				+0.4
5,047,207	+				+0.4
5,047,207	+				-2.4
5,047,208	-				+2.7
5,047,208	-				-0.6
5,047,208	-				-0.4
5,047,208	-				+0.4
5,047,208	-				-0.1
5,047,220	+				+0.7
5,047,221	-				-0.6
5,047,228	+				+0.9
5,047,228	+				+1.4
5,047,228	+				+0.4
5,047,228	+				+1.4
5,047,228	+				-1.6
5,047,228	+				-0.6
5,047,229	-				-0.7
5,047,240	+				-0.7
5,047,240	+				-0.6
5,047,240	+				+0.4
5,047,240	+				-0.1
5,047,240	+				+1.4
5,047,240	+				-0.7
5,047,241	-				-0.0
5,047,241	-				-0.5
5,047,241	-				+0.7
5,047,241	-				+0.2
5,047,276	+				-1.2
5,047,276	+				+1.2
5,047,277	-				-1.2
5,047,277	-				+1.0
5,047,277	-				-1.2
5,047,283	+				-0.6
5,047,283	+				+1.0
5,047,283	+				+0.1
5,047,283	+				+1.4
5,047,283	+				+0.1
5,047,283	+				-0.0
5,047,283	+				-0.4
5,047,283	+				-0.4
5,047,284	-				+0.1
5,047,284	-				-0.6
5,047,284	-				-0.8
5,047,284	-				-1.0
5,047,284	-				+0.9
5,047,284	-				-0.6
5,047,284	-				+0.2
5,047,284	-				+0.6
5,047,284	-				+0.9
5,047,284	-				-0.5
5,047,284	-				-0.2
5,047,285	+				-0.1
5,047,285	+				-1.9
5,047,285	+				+1.0
5,047,285	+				-0.1
5,047,285	+				+0.6
5,047,285	+				-0.8
5,047,285	+				+0.4
5,047,285	+				-0.3
5,047,285	+				-0.6
5,047,285	+				+0.6
5,047,285	+				-0.2
5,047,285	+				-0.1
5,047,285	+				+0.2
5,047,285	+				-2.2
5,047,285	+				-0.6
5,047,285	+				+1.0
5,047,285	+				+1.8
5,047,285	+				-0.6
5,047,285	+				+1.2
5,047,285	+				-0.9
5,047,286	-				+0.1
5,047,286	-				+0.4
5,047,286	-				+0.0
5,047,286	-				-1.5
5,047,286	-				+0.4
5,047,286	-				+1.2
5,047,286	-				-2.9
5,047,332	+				+0.8
5,047,332	+				-0.4
5,047,332	+				-0.0
5,047,333	-				-0.2
5,047,333	-				-1.2
5,047,333	-				-0.2
5,047,333	-				-0.0
5,047,335	+				+0.5
5,047,336	-				-0.1
5,047,356	+				-0.0
5,047,356	+				+0.8
5,047,365	+				-0.1
5,047,366	-				-0.4
5,047,377	+				+1.9
5,047,378	-				+2.4
5,047,380	+				-0.6
5,047,381	-				-1.0
5,047,393	-				+0.7
5,047,458	-		AO353_22985	0.10	+0.4
5,047,485	-		AO353_22985	0.24	-0.3
5,047,596	+		AO353_22985	0.81	+0.1
5,047,596	+		AO353_22985	0.81	-1.9
5,047,597	-		AO353_22985	0.82	+0.1
5,047,597	-		AO353_22985	0.82	-0.0
5,047,597	-		AO353_22985	0.82	-0.8
5,047,597	-		AO353_22985	0.82	+0.4
5,047,626	+				-0.8
5,047,626	+				-0.1
5,047,626	+				+1.1
5,047,627	-				-1.8
5,047,627	-				+0.4
5,047,685	+				+0.7
5,047,685	+				-0.2
5,047,703	+				+0.4
5,047,703	+				+0.5
5,047,703	+				+0.1
5,047,703	+				-0.2
5,047,704	-				+1.0
5,047,704	-				-0.3
5,047,704	-				-2.4
5,047,704	-				+1.4
5,047,704	-				-0.2
5,047,709	+				+1.0
5,047,709	+				-0.6
5,047,710	-				-0.2
5,047,710	-				-0.3
5,047,841	+				+0.1
5,047,841	+				+0.4
5,047,841	+				-0.4
5,047,842	-				+1.2
5,047,842	-				+0.7
5,047,842	-				-1.4
5,047,842	-				+1.4
5,047,842	-				-0.8
5,047,842	-				+1.7
5,047,842	-				-2.2
5,047,842	-				+0.7
5,047,842	-				-0.6
5,047,842	-				-0.6
5,047,898	-				+0.4
5,047,898	-				+1.6
5,047,946	+				-1.9
5,047,946	+				+0.1
5,047,946	+				-0.4
5,047,946	+				+0.1
5,047,946	+				+0.2
5,047,947	-				+0.2
5,047,947	-				-0.7
5,047,947	-				+0.4
5,047,950	+				-0.2
5,047,950	+				-0.6
5,047,951	-				+0.6
5,047,951	-				+0.6
5,047,951	-				+0.7
5,047,951	-				+1.1
5,047,951	-				-0.8
5,047,982	+				+0.8
5,047,983	-				+1.4
5,047,983	-				+1.3
5,047,983	-				+2.5
5,048,007	+				+0.9
5,048,007	+				-0.2
5,048,008	-				-0.8
5,048,015	+				-0.1
5,048,015	+				+0.4
5,048,048	+		AO353_22990	0.18	+0.1
5,048,048	+		AO353_22990	0.18	-0.4
5,048,048	+		AO353_22990	0.18	+1.1
5,048,048	+		AO353_22990	0.18	-1.3
5,048,048	+		AO353_22990	0.18	-1.6
5,048,048	+		AO353_22990	0.18	-0.3
5,048,051	+		AO353_22990	0.19	-0.3
5,048,127	-		AO353_22990	0.41	+1.7
5,048,127	-		AO353_22990	0.41	+0.7
5,048,127	-		AO353_22990	0.41	+1.7
5,048,179	+		AO353_22990	0.55	+0.7
5,048,180	-		AO353_22990	0.56	-0.6