Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21085

Experiment: Choline Lysine 12 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 12 mM
4,610,613	+				+1.5
4,610,631	+				-1.9
4,610,660	+				-0.2
4,610,660	+				+0.9
4,610,660	+				-0.5
4,610,661	-				+2.1
4,610,694	-				+0.5
4,610,694	-				+1.2
4,610,694	-				-0.5
4,610,694	-				-0.6
4,610,694	-				+0.1
4,610,697	+				-1.3
4,610,697	+				+0.6
4,610,697	+				+0.5
4,610,698	-				+0.3
4,610,747	+				+0.8
4,611,047	+		AO353_21080	0.37	+0.5
4,611,047	+		AO353_21080	0.37	-0.5
4,611,047	+		AO353_21080	0.37	-1.3
4,611,047	+		AO353_21080	0.37	-0.9
4,611,047	+		AO353_21080	0.37	-1.7
4,611,047	+		AO353_21080	0.37	-0.1
4,611,047	+		AO353_21080	0.37	+1.0
4,611,048	-		AO353_21080	0.37	-1.8
4,611,066	+		AO353_21080	0.41	-1.1
4,611,066	+		AO353_21080	0.41	-0.3
4,611,066	+		AO353_21080	0.41	-1.1
4,611,066	+		AO353_21080	0.41	-0.3
4,611,067	-		AO353_21080	0.41	+0.5
4,611,102	+		AO353_21080	0.50	-0.8
4,611,102	+		AO353_21080	0.50	-2.1
4,611,103	-		AO353_21080	0.50	-0.1
4,611,103	-		AO353_21080	0.50	-0.7
4,611,103	-		AO353_21080	0.50	-0.8
4,611,103	-		AO353_21080	0.50	-0.2
4,611,103	-		AO353_21080	0.50	-1.8
4,611,189	+		AO353_21080	0.70	-0.5
4,611,190	-		AO353_21080	0.70	-1.2
4,611,190	-		AO353_21080	0.70	+0.8
4,611,199	-		AO353_21080	0.73	-1.1
4,611,199	-		AO353_21080	0.73	-0.0
4,611,199	-		AO353_21080	0.73	-1.3
4,611,199	-		AO353_21080	0.73	+1.5
4,611,235	+		AO353_21080	0.81	-1.1
4,611,236	-		AO353_21080	0.81	+0.1
4,611,308	+				+0.1
4,611,309	-				+0.5
4,611,326	+				-0.5
4,611,326	+				-0.9
4,611,326	+				+0.0
4,611,327	-				-0.8
4,611,327	-				+0.8
4,611,327	-				+2.4
4,611,327	-				-0.2
4,611,331	+				+3.0
4,611,331	+				+1.3
4,611,369	-				+0.8
4,611,382	-				-0.0
4,611,407	+				+0.2
4,611,432	-				-1.1
4,611,432	-				+0.0
4,611,458	+				-0.2
4,611,499	+				-0.8
4,611,499	+				-1.5
4,611,500	-				+1.1
4,611,500	-				+0.0
4,611,504	-				-0.2
4,611,504	-				+0.2
4,611,504	-				+0.7
4,611,528	+				+1.5
4,611,528	+				-1.9
4,611,528	+				-1.5
4,611,528	+				-1.1
4,611,528	+				-0.4
4,611,528	+				+0.7
4,611,528	+				-0.6
4,611,529	-				-1.1
4,611,532	+				+0.8
4,611,532	+				-0.5
4,611,532	+				+0.6
4,611,533	-				-0.1
4,611,573	+				-0.8
4,611,573	+				+0.1
4,611,576	+				+1.5
4,611,576	+				+1.3
4,611,576	+				-0.8
4,611,576	+				-0.3
4,611,576	+				-0.2
4,611,576	+				-0.5
4,611,577	-				-0.5
4,611,577	-				-1.8
4,611,577	-				+0.7
4,611,577	-				-0.6
4,611,577	-				+2.1
4,611,577	-				-0.5
4,611,617	+				-0.5
4,611,617	+				+0.3
4,611,617	+				-1.1
4,611,618	-				-0.6
4,611,618	-				+1.1
4,611,618	-				-1.5
4,611,618	-				+0.5
4,611,618	-				+0.5
4,611,618	-				+0.5
4,611,621	+				-2.5
4,611,621	+				-2.1
4,611,621	+				+0.2
4,611,621	+				-0.1
4,611,621	+				+0.0
4,611,621	+				+0.8
4,611,621	+				+1.5
4,611,622	-				-0.5
4,611,622	-				-0.5
4,611,622	-				-2.2
4,611,625	+				-0.0
4,611,625	+				-0.3
4,611,626	-				-0.9
4,611,626	-				+1.9
4,611,757	+		AO353_21085	0.26	+0.8
4,611,757	+		AO353_21085	0.26	+1.5
4,611,757	+		AO353_21085	0.26	+0.3
4,611,757	+		AO353_21085	0.26	-2.3
4,611,757	+		AO353_21085	0.26	-0.2
4,611,758	-		AO353_21085	0.26	-0.5
4,611,758	-		AO353_21085	0.26	+1.5
4,611,824	+		AO353_21085	0.36	+0.9
4,611,844	+		AO353_21085	0.40	-0.4
4,611,844	+		AO353_21085	0.40	-0.8
4,611,844	+		AO353_21085	0.40	+0.1
4,611,845	-		AO353_21085	0.40	-0.2
4,611,853	+		AO353_21085	0.41	+0.5
4,611,853	+		AO353_21085	0.41	+0.7
4,611,853	+		AO353_21085	0.41	+1.5
4,611,853	+		AO353_21085	0.41	-0.6
4,611,853	+		AO353_21085	0.41	+0.5
4,611,853	+		AO353_21085	0.41	-1.1
4,611,853	+		AO353_21085	0.41	-0.5
4,611,854	-		AO353_21085	0.41	+0.8
4,611,854	-		AO353_21085	0.41	+1.8
4,611,854	-		AO353_21085	0.41	+0.1
4,611,988	+		AO353_21085	0.63	+1.8
4,611,988	+		AO353_21085	0.63	+1.4
4,611,989	-		AO353_21085	0.63	+3.5
4,611,989	-		AO353_21085	0.63	-0.1
4,611,989	-		AO353_21085	0.63	+1.5
4,612,353	-				-0.1
4,612,353	-				+0.1
4,612,395	+		AO353_21090	0.19	+0.0
4,612,395	+		AO353_21090	0.19	-2.6
4,612,395	+		AO353_21090	0.19	+0.1
4,612,395	+		AO353_21090	0.19	+0.5
4,612,396	-		AO353_21090	0.19	-0.2
4,612,396	-		AO353_21090	0.19	+0.1
4,612,469	+		AO353_21090	0.34	+0.9
4,612,469	+		AO353_21090	0.34	-0.0
4,612,469	+		AO353_21090	0.34	+0.0
4,612,469	+		AO353_21090	0.34	-0.8
4,612,470	-		AO353_21090	0.34	-1.7
4,612,470	-		AO353_21090	0.34	+0.4
4,612,550	+		AO353_21090	0.50	-0.8
4,612,550	+		AO353_21090	0.50	+1.7
4,612,550	+		AO353_21090	0.50	+0.8
4,612,551	-		AO353_21090	0.51	-0.4
4,612,682	+		AO353_21090	0.78	-1.9
4,612,682	+		AO353_21090	0.78	-0.0
4,612,683	-		AO353_21090	0.78	-2.1
4,612,690	-		AO353_21090	0.79	-1.1
4,612,690	-		AO353_21090	0.79	-0.3
4,612,814	+				-0.8
4,612,814	+				-0.1
4,612,814	+				-0.1
4,612,814	+				-0.1
4,612,814	+				+0.9
4,612,814	+				+0.5
4,612,814	+				-1.8
4,612,814	+				+0.7
4,612,814	+				-1.1
4,612,814	+				-0.8
4,612,814	+				-0.5
4,612,814	+				+0.5
4,612,814	+				+1.7
4,612,815	+				-0.9
4,612,815	-				-1.8
4,612,815	-				-0.5
4,612,815	-				+0.3
4,612,815	-				-0.5
4,612,815	-				-0.8
4,612,815	-				-2.1
4,612,815	-				-0.3
4,612,815	-				-1.4
4,612,815	-				-1.3
4,612,815	-				-1.3
4,612,815	-				-0.8
4,612,815	-				+0.9
4,612,817	+				+0.0
4,612,817	+				-0.7
4,612,817	+				-0.3
4,612,817	+				+0.2
4,612,818	-				+0.5
4,612,818	-				+0.1
4,612,818	-				-0.4
4,612,845	+				-0.1
4,612,845	+				-0.3
4,612,845	+				+1.7
4,612,845	+				+0.2
4,612,845	+				-1.5
4,612,845	+				+0.3
4,612,845	+				+0.3
4,612,845	+				-1.1
4,612,845	+				-0.5
4,612,845	+				-0.7
4,612,846	-				+1.5
4,612,846	-				+3.8
4,612,846	-				-2.5
4,612,846	-				+0.0
4,612,846	-				+1.3
4,612,846	-				+0.4
4,612,846	-				+1.1
4,612,846	-				+0.1
4,612,846	-				+0.5
4,612,846	-				+0.1
4,612,846	-				+0.7
4,612,846	-				-0.5
4,612,846	-				+1.5
4,612,846	-				-0.3
4,612,846	-				-0.5
4,612,846	-				+1.7
4,612,846	-				+1.5
4,612,846	-				+0.9
4,612,846	-				-0.9
4,612,846	-				+0.5
4,612,846	-				-0.1
4,612,846	-				+0.3
4,612,846	-				-1.1
4,612,849	+				-0.5
4,612,849	+				+0.5
4,612,849	+				+0.3
4,612,850	-				-1.6
4,612,850	-				-1.5
4,612,850	-				-1.5
4,612,850	-				+0.1
4,612,915	+				-2.1
4,612,915	+				+0.1
4,612,915	+				-0.1
4,612,915	+				+0.6
4,612,915	+				-1.5
4,612,915	+				-0.0
4,612,916	-				-0.2
4,612,916	-				+0.0
4,612,916	-				+0.9
4,612,916	-				+1.3
4,612,916	-				-1.5
4,612,916	-				-0.9
4,612,916	-				-0.7
4,612,916	-				+0.8
4,612,916	-				-0.1
4,612,916	-				+0.3
4,612,916	-				-0.5
4,612,916	-				-0.1