Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15915

Experiment: Choline Lysine 12 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 12 mM
3,511,656	+				-0.9
3,511,656	+				-0.3
3,511,656	+				-1.7
3,511,656	+				-1.3
3,511,657	-				+0.1
3,511,657	-				-2.1
3,511,657	-				+1.3
3,511,657	-				+0.8
3,511,657	-				+0.5
3,511,835	+				+0.6
3,511,835	+				-0.2
3,511,835	+				-0.0
3,511,835	+				-1.4
3,511,835	+				-0.2
3,511,835	+				+0.5
3,511,835	+				+0.2
3,511,836	-				+0.9
3,511,836	-				-1.9
3,511,836	-				+0.9
3,511,836	-				-0.3
3,511,836	-				-0.8
3,511,836	-				-1.4
3,511,843	+				+1.3
3,511,923	+				+2.1
3,511,923	+				-1.2
3,511,923	+				-0.1
3,511,924	-				-0.1
3,511,924	-				-0.1
3,511,926	+				-1.4
3,511,926	+				+0.0
3,511,926	+				-0.1
3,511,926	+				-0.2
3,511,926	+				-0.9
3,511,926	+				+0.3
3,511,926	+				-0.4
3,511,926	+				-1.6
3,511,926	+				+0.7
3,511,927	-				-0.9
3,511,927	-				+0.8
3,511,927	-				-0.8
3,511,927	-				-0.1
3,511,927	-				+0.5
3,511,941	+				+0.7
3,511,974	+				-1.4
3,511,974	+				-0.8
3,511,974	+				+0.9
3,511,975	-				+0.9
3,512,066	+				+0.7
3,512,066	+				+1.9
3,512,067	-				-0.1
3,512,067	-				-0.6
3,512,067	-				-1.1
3,512,067	-				+1.7
3,512,067	-				-0.9
3,512,177	+		AO353_15915	0.13	-0.1
3,512,199	+		AO353_15915	0.15	+0.9
3,512,199	+		AO353_15915	0.15	+0.9
3,512,200	-		AO353_15915	0.15	+0.9
3,512,262	+		AO353_15915	0.20	-2.2
3,512,263	-		AO353_15915	0.20	+0.1
3,512,263	-		AO353_15915	0.20	-2.4
3,512,394	+		AO353_15915	0.32	+0.7
3,512,394	+		AO353_15915	0.32	-1.3
3,512,394	+		AO353_15915	0.32	-1.4
3,512,394	+		AO353_15915	0.32	-1.3
3,512,394	+		AO353_15915	0.32	+0.1
3,512,394	+		AO353_15915	0.32	-0.1
3,512,395	-		AO353_15915	0.32	+2.9
3,512,395	-		AO353_15915	0.32	+0.5
3,512,395	-		AO353_15915	0.32	+2.5
3,512,395	-		AO353_15915	0.32	-0.7
3,512,395	-		AO353_15915	0.32	+1.3
3,512,395	-		AO353_15915	0.32	-0.7
3,512,531	+		AO353_15915	0.44	-0.1
3,512,601	-		AO353_15915	0.50	+0.3
3,512,601	-		AO353_15915	0.50	+0.9
3,512,604	+		AO353_15915	0.50	-0.1
3,512,604	+		AO353_15915	0.50	+1.9
3,512,604	+		AO353_15915	0.50	-0.1
3,512,604	+		AO353_15915	0.50	-1.2
3,512,605	-		AO353_15915	0.50	+0.3
3,512,605	-		AO353_15915	0.50	+0.4
3,512,605	-		AO353_15915	0.50	+1.2
3,512,605	-		AO353_15915	0.50	-0.8
3,512,605	-		AO353_15915	0.50	-0.2
3,512,605	-		AO353_15915	0.50	+0.3
3,512,605	-		AO353_15915	0.50	-0.1
3,512,605	-		AO353_15915	0.50	-0.7
3,512,605	-		AO353_15915	0.50	-0.7
3,512,625	+		AO353_15915	0.52	+2.5
3,512,625	+		AO353_15915	0.52	-0.4
3,512,625	+		AO353_15915	0.52	-0.3
3,512,625	+		AO353_15915	0.52	+0.9
3,512,626	-		AO353_15915	0.52	+1.2
3,512,626	-		AO353_15915	0.52	-0.4
3,512,626	-		AO353_15915	0.52	+0.2
3,512,626	-		AO353_15915	0.52	-0.7
3,512,626	-		AO353_15915	0.52	+0.5
3,512,626	-		AO353_15915	0.52	+0.1
3,512,626	-		AO353_15915	0.52	-2.1
3,512,626	-		AO353_15915	0.52	-0.1
3,512,651	-		AO353_15915	0.54	+0.3
3,512,651	-		AO353_15915	0.54	-0.7
3,512,686	-		AO353_15915	0.57	+0.2
3,512,686	-		AO353_15915	0.57	+1.2
3,512,724	+		AO353_15915	0.60	-0.4
3,512,724	+		AO353_15915	0.60	-0.3
3,512,725	-		AO353_15915	0.60	+0.5
3,512,725	-		AO353_15915	0.60	-0.3
3,512,725	-		AO353_15915	0.60	+2.5
3,512,725	-		AO353_15915	0.60	+1.7
3,512,725	-		AO353_15915	0.60	-2.1
3,512,725	-		AO353_15915	0.60	-0.1
3,512,725	-		AO353_15915	0.60	-0.1
3,512,802	+		AO353_15915	0.67	+0.9
3,512,802	+		AO353_15915	0.67	-1.4
3,512,802	+		AO353_15915	0.67	+0.1
3,512,802	+		AO353_15915	0.67	+0.6
3,512,802	+		AO353_15915	0.67	+0.7
3,512,802	+		AO353_15915	0.67	-1.9
3,512,802	+		AO353_15915	0.67	+1.1
3,512,803	-		AO353_15915	0.67	+0.9
3,512,803	-		AO353_15915	0.67	+0.8
3,512,803	-		AO353_15915	0.67	-1.1
3,512,803	-		AO353_15915	0.67	-0.8
3,512,803	-		AO353_15915	0.67	-0.1
3,512,803	-		AO353_15915	0.67	-0.1
3,512,803	-		AO353_15915	0.67	+0.3
3,512,803	-		AO353_15915	0.67	-0.1
3,512,803	-		AO353_15915	0.67	+0.5
3,512,803	-		AO353_15915	0.67	+0.9
3,512,803	-		AO353_15915	0.67	+0.3
3,512,803	-		AO353_15915	0.67	+0.2
3,512,836	-		AO353_15915	0.70	-0.2
3,512,895	+		AO353_15915	0.75	+0.4
3,512,895	+		AO353_15915	0.75	-0.4
3,512,896	-		AO353_15915	0.75	+0.1
3,512,896	-		AO353_15915	0.75	+1.8
3,512,951	+		AO353_15915	0.80	-0.0
3,512,970	+		AO353_15915	0.82	-0.7
3,512,970	+		AO353_15915	0.82	-0.1
3,512,971	-		AO353_15915	0.82	+0.5
3,512,989	-		AO353_15915	0.83	-0.8
3,513,082	-				+0.2
3,513,166	+				-0.6
3,513,166	+				+1.2
3,513,166	+				+0.2
3,513,166	+				-0.4
3,513,166	+				+1.7
3,513,166	+				-0.5
3,513,166	+				-0.1
3,513,167	-				+0.5
3,513,167	-				-0.3
3,513,167	-				-2.4
3,513,167	-				-0.9
3,513,167	-				+0.1
3,513,376	+		AO353_15920	0.26	-0.1
3,513,376	+		AO353_15920	0.26	+0.4
3,513,377	-		AO353_15920	0.27	-0.1
3,513,377	-		AO353_15920	0.27	+0.1
3,513,377	-		AO353_15920	0.27	+0.9
3,513,503	+		AO353_15920	0.42	+0.5
3,513,504	-		AO353_15920	0.43	-0.1
3,513,504	-		AO353_15920	0.43	+0.4
3,513,504	-		AO353_15920	0.43	+1.2
3,513,504	-		AO353_15920	0.43	-0.8
3,513,548	+		AO353_15920	0.48	+0.9
3,513,548	+		AO353_15920	0.48	-0.1
3,513,548	+		AO353_15920	0.48	+0.2
3,513,548	+		AO353_15920	0.48	+1.9
3,513,548	+		AO353_15920	0.48	-1.8
3,513,548	+		AO353_15920	0.48	+0.3
3,513,548	+		AO353_15920	0.48	-0.8
3,513,548	+		AO353_15920	0.48	+0.9
3,513,549	-		AO353_15920	0.48	+0.5
3,513,549	-		AO353_15920	0.48	+0.8
3,513,549	-		AO353_15920	0.48	-0.2
3,513,549	-		AO353_15920	0.48	+1.1
3,513,549	-		AO353_15920	0.48	+0.9
3,513,671	+		AO353_15920	0.64	-0.8
3,513,671	+		AO353_15920	0.64	+1.3
3,513,672	-		AO353_15920	0.64	-0.4
3,513,672	-		AO353_15920	0.64	+0.9
3,513,749	+		AO353_15920	0.73	-1.4
3,513,749	+		AO353_15920	0.73	+0.5
3,513,750	-		AO353_15920	0.74	-0.1
3,513,750	-		AO353_15920	0.74	-0.1
3,513,750	-		AO353_15920	0.74	+1.8
3,513,750	-		AO353_15920	0.74	-0.1
3,513,750	-		AO353_15920	0.74	+1.1
3,513,750	-		AO353_15920	0.74	-0.5
3,513,797	+		AO353_15920	0.80	+0.4
3,513,797	+		AO353_15920	0.80	+1.5
3,513,797	+		AO353_15920	0.80	-1.2
3,513,797	+		AO353_15920	0.80	-1.5
3,513,797	+		AO353_15920	0.80	-0.2
3,513,798	-		AO353_15920	0.80	+0.2
3,513,798	-		AO353_15920	0.80	-0.4
3,513,798	-		AO353_15920	0.80	-0.2
3,513,798	-		AO353_15920	0.80	+0.9
3,513,798	-		AO353_15920	0.80	+1.3
3,513,799	+		AO353_15920	0.80	+0.7
3,513,800	-		AO353_15920	0.80	+0.9
3,513,867	+		AO353_15920	0.88	-1.9
3,513,868	-		AO353_15920	0.89	-0.1
3,513,868	-		AO353_15920	0.89	-0.1
3,513,996	+				-0.9
3,513,997	-				-1.4
3,513,997	-				-1.1
3,514,053	+				-0.2