Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11975

Experiment: Choline Lysine 12 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 12 mM
2,635,883	+				+0.8
2,635,883	+				+1.1
2,635,883	+				+0.2
2,635,883	+				-0.3
2,635,884	+				-1.8
2,635,884	-				-2.5
2,635,884	-				+0.8
2,635,884	-				-0.9
2,635,884	-				-0.4
2,635,911	+				+0.8
2,635,911	+				-1.3
2,635,911	+				-1.9
2,635,911	+				+0.3
2,635,912	-				+0.9
2,635,912	-				-1.2
2,635,912	-				-0.1
2,635,915	+				+1.3
2,635,916	-				+0.7
2,635,916	-				+0.3
2,635,916	-				+0.5
2,636,037	+		AO353_11960	0.35	+1.4
2,636,044	+		AO353_11960	0.37	-0.3
2,636,044	+		AO353_11960	0.37	+0.3
2,636,044	+		AO353_11960	0.37	-0.6
2,636,044	+		AO353_11960	0.37	+3.3
2,636,044	+		AO353_11960	0.37	+2.3
2,636,044	+		AO353_11960	0.37	+0.7
2,636,044	+		AO353_11960	0.37	+0.4
2,636,044	+		AO353_11960	0.37	-1.5
2,636,045	-		AO353_11960	0.37	+1.3
2,636,045	-		AO353_11960	0.37	+0.5
2,636,045	-		AO353_11960	0.37	-2.5
2,636,045	-		AO353_11960	0.37	+0.6
2,636,045	-		AO353_11960	0.37	+0.7
2,636,045	-		AO353_11960	0.37	+1.3
2,636,045	-		AO353_11960	0.37	-1.7
2,636,045	-		AO353_11960	0.37	+0.1
2,636,045	-		AO353_11960	0.37	-0.6
2,636,057	+		AO353_11960	0.40	+0.4
2,636,057	+		AO353_11960	0.40	+0.7
2,636,057	+		AO353_11960	0.40	+0.1
2,636,058	-		AO353_11960	0.40	+0.2
2,636,058	-		AO353_11960	0.40	-0.2
2,636,058	-		AO353_11960	0.40	+0.3
2,636,058	-		AO353_11960	0.40	-0.8
2,636,088	+		AO353_11960	0.48	-1.5
2,636,088	+		AO353_11960	0.48	+0.1
2,636,088	+		AO353_11960	0.48	-1.6
2,636,088	+		AO353_11960	0.48	+0.0
2,636,088	+		AO353_11960	0.48	+1.3
2,636,088	+		AO353_11960	0.48	-0.6
2,636,088	+		AO353_11960	0.48	-0.1
2,636,088	+		AO353_11960	0.48	-1.7
2,636,088	+		AO353_11960	0.48	+0.1
2,636,089	-		AO353_11960	0.48	+1.3
2,636,089	-		AO353_11960	0.48	+0.3
2,636,089	-		AO353_11960	0.48	-1.0
2,636,089	-		AO353_11960	0.48	+0.6
2,636,089	-		AO353_11960	0.48	+0.4
2,636,089	-		AO353_11960	0.48	+1.6
2,636,089	-		AO353_11960	0.48	+1.0
2,636,089	-		AO353_11960	0.48	+4.3
2,636,089	-		AO353_11960	0.48	-0.7
2,636,092	+		AO353_11960	0.49	+1.3
2,636,092	+		AO353_11960	0.49	-2.0
2,636,093	-		AO353_11960	0.49	+0.1
2,636,093	-		AO353_11960	0.49	+0.9
2,636,093	-		AO353_11960	0.49	-0.2
2,636,093	-		AO353_11960	0.49	-0.3
2,636,093	-		AO353_11960	0.49	+0.8
2,636,093	-		AO353_11960	0.49	-0.3
2,636,093	-		AO353_11960	0.49	-0.2
2,636,167	-		AO353_11960	0.68	-0.9
2,636,167	-		AO353_11960	0.68	+0.3
2,636,199	+		AO353_11960	0.76	+1.9
2,636,199	+		AO353_11960	0.76	-0.2
2,636,199	+		AO353_11960	0.76	+0.4
2,636,200	-		AO353_11960	0.76	-1.7
2,636,200	-		AO353_11960	0.76	+0.3
2,636,200	-		AO353_11960	0.76	-0.6
2,636,200	-		AO353_11960	0.76	+0.3
2,636,200	-		AO353_11960	0.76	+0.3
2,636,221	+		AO353_11960	0.81	-0.6
2,636,221	+		AO353_11960	0.81	-0.4
2,636,250	+		AO353_11960	0.88	+0.3
2,636,251	-		AO353_11960	0.89	-0.4
2,636,293	+				+2.9
2,636,293	+				+0.3
2,636,293	+				+1.0
2,636,335	+				+1.3
2,636,335	+				-0.2
2,636,335	+				-0.1
2,636,335	+				-0.1
2,636,335	+				-0.1
2,636,335	+				+0.3
2,636,336	-				-0.3
2,636,336	-				+0.3
2,636,336	-				+0.7
2,636,336	-				+0.4
2,636,365	+		AO353_11965	0.11	-0.4
2,636,365	+		AO353_11965	0.11	+1.3
2,636,365	+		AO353_11965	0.11	-2.0
2,636,365	+		AO353_11965	0.11	+0.9
2,636,365	+		AO353_11965	0.11	-0.3
2,636,366	-		AO353_11965	0.11	+0.3
2,636,366	-		AO353_11965	0.11	+0.5
2,636,366	-		AO353_11965	0.11	+0.9
2,636,423	+		AO353_11965	0.34	+2.1
2,636,424	-		AO353_11965	0.35	+0.7
2,636,424	-		AO353_11965	0.35	+1.7
2,636,492	+		AO353_11965	0.62	+0.5
2,636,492	+		AO353_11965	0.62	+1.6
2,636,492	+		AO353_11965	0.62	-0.5
2,636,492	+		AO353_11965	0.62	-0.1
2,636,493	-		AO353_11965	0.63	-0.3
2,636,493	-		AO353_11965	0.63	+1.2
2,636,550	+		AO353_11965	0.86	-0.9
2,636,550	+		AO353_11965	0.86	-1.2
2,636,550	+		AO353_11965	0.86	+1.3
2,636,551	-		AO353_11965	0.86	+1.0
2,636,551	-		AO353_11965	0.86	+0.3
2,636,551	-		AO353_11965	0.86	+0.0
2,636,551	-		AO353_11965	0.86	-0.1
2,636,551	-		AO353_11965	0.86	+2.5
2,636,551	-		AO353_11965	0.86	-0.7
2,636,551	-		AO353_11965	0.86	+2.6
2,636,582	+				+0.6
2,636,582	+				-1.4
2,636,582	+				+1.2
2,636,582	+				+0.1
2,636,583	-				-0.7
2,636,583	-				-0.3
2,636,583	-				+1.8
2,636,583	-				-2.3
2,636,583	-				+0.8
2,636,583	-				+1.3
2,636,656	-				+0.2
2,636,656	-				-1.9
2,636,789	+				+0.3
2,636,790	-				+0.1
2,636,883	+				+0.5
2,636,883	+				+0.8
2,636,884	-				+0.6
2,636,884	-				-0.1
2,636,884	-				-0.4
2,636,884	-				+1.3
2,637,021	+		AO353_11975	0.29	+0.6
2,637,021	+		AO353_11975	0.29	+0.0
2,637,021	+		AO353_11975	0.29	+0.6
2,637,021	+		AO353_11975	0.29	+0.5
2,637,021	+		AO353_11975	0.29	-0.7
2,637,021	+		AO353_11975	0.29	+0.2
2,637,021	+		AO353_11975	0.29	-0.7
2,637,021	+		AO353_11975	0.29	+2.3
2,637,022	-		AO353_11975	0.29	+1.3
2,637,022	-		AO353_11975	0.29	+0.4
2,637,022	-		AO353_11975	0.29	-0.0
2,637,022	-		AO353_11975	0.29	-0.5
2,637,022	-		AO353_11975	0.29	-1.9
2,637,022	-		AO353_11975	0.29	+0.9
2,637,022	-		AO353_11975	0.29	+0.3
2,637,045	-		AO353_11975	0.33	-0.2
2,637,097	-		AO353_11975	0.43	+1.3
2,637,097	-		AO353_11975	0.43	-1.6
2,637,097	-		AO353_11975	0.43	-0.7
2,637,097	-		AO353_11975	0.43	+1.8
2,637,097	-		AO353_11975	0.43	-1.0
2,637,097	-		AO353_11975	0.43	-1.0
2,637,097	-		AO353_11975	0.43	+0.8
2,637,146	+		AO353_11975	0.52	-0.6
2,637,147	-		AO353_11975	0.52	-1.0
2,637,147	-		AO353_11975	0.52	+0.1
2,637,178	-		AO353_11975	0.58	+1.7
2,637,178	-		AO353_11975	0.58	-0.9
2,637,178	-		AO353_11975	0.58	+0.6
2,637,178	-		AO353_11975	0.58	-0.4
2,637,213	+		AO353_11975	0.65	+1.5
2,637,214	-		AO353_11975	0.65	+0.4
2,637,214	-		AO353_11975	0.65	-0.6
2,637,214	-		AO353_11975	0.65	-0.4
2,637,214	-		AO353_11975	0.65	-1.9
2,637,214	-		AO353_11975	0.65	+0.3
2,637,238	+		AO353_11975	0.70	-2.0
2,637,246	+		AO353_11975	0.71	-1.5
2,637,246	+		AO353_11975	0.71	+0.0
2,637,247	-		AO353_11975	0.71	-1.0
2,637,247	-		AO353_11975	0.71	+0.6
2,637,247	-		AO353_11975	0.71	-0.3
2,637,247	-		AO353_11975	0.71	+0.9
2,637,269	+		AO353_11975	0.76	+0.3
2,637,269	+		AO353_11975	0.76	+1.1
2,637,269	+		AO353_11975	0.76	+0.3
2,637,269	+		AO353_11975	0.76	+0.5
2,637,269	+		AO353_11975	0.76	+0.7
2,637,269	+		AO353_11975	0.76	+1.0
2,637,269	+		AO353_11975	0.76	-0.3
2,637,269	+		AO353_11975	0.76	+0.7
2,637,269	+		AO353_11975	0.76	-0.3
2,637,269	+		AO353_11975	0.76	-0.0
2,637,270	-		AO353_11975	0.76	+0.5
2,637,270	-		AO353_11975	0.76	+0.9
2,637,270	-		AO353_11975	0.76	-1.5
2,637,273	+		AO353_11975	0.76	-0.7
2,637,273	+		AO353_11975	0.76	+1.3
2,637,273	+		AO353_11975	0.76	+0.8
2,637,273	+		AO353_11975	0.76	+0.9
2,637,274	-		AO353_11975	0.77	+0.7
2,637,274	-		AO353_11975	0.77	+0.1
2,637,397	+				+1.3
2,637,397	+				+2.1
2,637,397	+				-0.0
2,637,397	+				-1.0
2,637,398	-				-0.7
2,637,398	-				-0.9
2,637,398	-				+1.3
2,637,586	+				+0.9
2,637,586	+				+0.1
2,637,586	+				-1.4
2,637,586	+				-0.3
2,637,586	+				+2.6
2,637,586	+				+0.8
2,637,586	+				-1.0
2,637,586	+				+0.2
2,637,587	-				-1.0
2,637,587	-				-0.9
2,637,587	-				+0.0
2,637,597	+				+0.3
2,637,597	+				-0.5
2,637,636	+				+1.6
2,637,636	+				+0.3
2,637,637	-				+1.2
2,637,637	-				+0.9
2,637,705	+				+0.3
2,637,705	+				+0.8
2,637,705	+				-0.7
2,637,705	+				-2.0
2,637,706	-				+1.3
2,637,706	-				-1.0
2,637,706	-				-0.5
2,637,706	-				-0.4
2,637,706	-				-1.7
2,637,728	+				+0.1
2,637,728	+				-0.1
2,637,728	+				-1.0
2,637,743	+				+0.5
2,637,743	+				-0.2
2,637,750	+				-2.6
2,637,750	+				-1.4
2,637,750	+				+0.3
2,637,750	+				-0.7
2,637,751	-				-0.1
2,637,751	-				-1.0
2,637,751	-				+0.2
2,637,751	-				-0.7
2,637,782	-				+1.3
2,637,789	-				+1.3
2,637,875	-				+1.9
2,637,875	-				+0.6
2,637,881	+				-0.2
2,637,881	+				-1.1
2,637,881	+				+1.3
2,637,881	+				-0.1
2,637,882	-				+0.3
2,637,882	-				-0.8
2,637,882	-				+0.2
2,637,882	-				+0.1
2,637,882	-				+0.7
2,637,882	-				+1.1
2,637,882	-				+0.3
2,637,883	+				+0.3
2,637,883	+				+2.1
2,637,884	-				-1.9
2,637,884	-				+0.7
2,637,884	-				-1.0
2,637,884	-				+1.3
2,637,906	+				+1.4
2,637,906	+				-0.9
2,637,907	-				-2.2
2,637,928	+				+1.6
2,637,929	-				-0.4
2,637,929	-				-1.3
2,638,071	+				+0.1
2,638,072	-				+0.4
2,638,111	-		AO353_11980	0.12	-0.7
2,638,124	+		AO353_11980	0.13	-0.3
2,638,124	+		AO353_11980	0.13	+2.0
2,638,124	+		AO353_11980	0.13	+1.6
2,638,194	+		AO353_11980	0.19	+0.3
2,638,194	+		AO353_11980	0.19	-1.1
2,638,195	-		AO353_11980	0.19	+0.3
2,638,195	-		AO353_11980	0.19	+0.5
2,638,195	-		AO353_11980	0.19	-2.2
2,638,279	+		AO353_11980	0.26	-1.6
2,638,279	+		AO353_11980	0.26	-0.4
2,638,279	+		AO353_11980	0.26	+1.3
2,638,279	+		AO353_11980	0.26	+1.6
2,638,279	+		AO353_11980	0.26	+0.9
2,638,279	+		AO353_11980	0.26	+0.7
2,638,280	-		AO353_11980	0.26	-0.3
2,638,280	-		AO353_11980	0.26	+1.1
2,638,280	-		AO353_11980	0.26	-1.5
2,638,280	-		AO353_11980	0.26	-0.2
2,638,280	-		AO353_11980	0.26	+0.0