Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08715

Experiment: Choline Lysine 12 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 12 mM
1,914,273	+		AO353_08710	0.60	+0.7
1,914,273	+		AO353_08710	0.60	-1.5
1,914,273	+		AO353_08710	0.60	+0.5
1,914,273	+		AO353_08710	0.60	+0.5
1,914,273	+		AO353_08710	0.60	+0.6
1,914,273	+		AO353_08710	0.60	-0.3
1,914,274	-		AO353_08710	0.60	+0.3
1,914,274	-		AO353_08710	0.60	-0.3
1,914,274	-		AO353_08710	0.60	+0.5
1,914,274	-		AO353_08710	0.60	-0.3
1,914,582	+		AO353_08710	0.78	+0.8
1,914,582	+		AO353_08710	0.78	+0.2
1,914,582	+		AO353_08710	0.78	-0.0
1,914,582	+		AO353_08710	0.78	-0.5
1,914,583	-		AO353_08710	0.78	+1.5
1,914,583	-		AO353_08710	0.78	+1.6
1,914,650	+		AO353_08710	0.81	-0.6
1,914,650	+		AO353_08710	0.81	+1.9
1,914,650	+		AO353_08710	0.81	-1.3
1,914,650	+		AO353_08710	0.81	+1.3
1,914,650	+		AO353_08710	0.81	+0.9
1,914,650	+		AO353_08710	0.81	+0.3
1,914,650	+		AO353_08710	0.81	-0.5
1,914,651	-		AO353_08710	0.81	+1.3
1,914,651	-		AO353_08710	0.81	+0.3
1,914,651	-		AO353_08710	0.81	-1.4
1,914,651	-		AO353_08710	0.81	-0.1
1,914,651	-		AO353_08710	0.81	+0.2
1,914,651	-		AO353_08710	0.81	+1.3
1,914,651	-		AO353_08710	0.81	-1.0
1,914,789	+		AO353_08710	0.89	-2.8
1,914,978	+				-0.5
1,914,979	-				-0.1
1,914,979	-				+1.0
1,914,979	-				-1.3
1,914,979	-				+0.1
1,914,997	+				+0.1
1,914,998	-				-0.3
1,915,076	+				+1.1
1,915,077	-				-1.0
1,915,077	-				+0.6
1,915,086	+				-1.5
1,915,086	+				+0.5
1,915,086	+				-0.0
1,915,087	-				+1.0
1,915,087	-				+1.3
1,915,087	-				+0.7
1,915,102	-				+0.8
1,915,102	-				+0.4
1,915,191	+		AO353_08715	0.33	+0.3
1,915,191	+		AO353_08715	0.33	-1.5
1,915,191	+		AO353_08715	0.33	-0.3
1,915,192	-		AO353_08715	0.33	+1.3
1,915,192	-		AO353_08715	0.33	-0.7
1,915,192	-		AO353_08715	0.33	-0.3
1,915,192	-		AO353_08715	0.33	-0.5
1,915,192	-		AO353_08715	0.33	+0.5
1,915,192	-		AO353_08715	0.33	+1.6
1,915,192	-		AO353_08715	0.33	-1.3
1,915,192	-		AO353_08715	0.33	+0.3
1,915,222	+		AO353_08715	0.42	-0.9
1,915,222	+		AO353_08715	0.42	+2.6
1,915,222	+		AO353_08715	0.42	-0.6
1,915,222	+		AO353_08715	0.42	+2.0
1,915,223	-		AO353_08715	0.42	+1.1
1,915,223	-		AO353_08715	0.42	+1.3
1,915,223	-		AO353_08715	0.42	+1.3
1,915,223	-		AO353_08715	0.42	+0.3
1,915,223	-		AO353_08715	0.42	+0.5
1,915,223	-		AO353_08715	0.42	+0.2
1,915,223	-		AO353_08715	0.42	-2.2
1,915,223	-		AO353_08715	0.42	+0.9
1,915,223	-		AO353_08715	0.42	-0.0
1,915,223	-		AO353_08715	0.42	-0.7
1,915,223	-		AO353_08715	0.42	-0.2
1,915,223	-		AO353_08715	0.42	+0.7
1,915,300	-		AO353_08715	0.64	+1.3
1,915,312	+		AO353_08715	0.68	+0.5
1,915,312	+		AO353_08715	0.68	+2.3
1,915,421	-				+1.0
1,915,421	-				+1.8
1,915,421	-				+0.7
1,915,421	-				+0.4
1,915,563	+				-1.0
1,915,563	+				+0.5
1,915,563	+				-0.4
1,915,563	+				+0.4
1,915,563	+				-1.0
1,915,563	+				+0.3
1,915,563	+				-1.6
1,915,563	+				+0.9
1,915,563	+				+1.5
1,915,563	+				-0.7
1,915,563	+				-0.1
1,915,563	+				-1.0
1,915,563	+				+1.3
1,915,563	+				+1.3
1,915,563	+				-0.3
1,915,563	+				+0.7
1,915,563	+				+0.2
1,915,564	-				-1.3
1,915,564	-				+1.7
1,915,564	-				-1.3
1,915,564	-				-0.3
1,915,564	-				+0.5
1,915,564	-				+0.3
1,915,564	-				-2.0
1,915,564	-				+1.1
1,915,564	-				+1.4
1,915,564	-				+0.7
1,915,564	-				+0.9
1,915,564	-				+0.1
1,915,564	-				-0.3
1,915,573	+				+2.6
1,915,573	+				+0.6
1,915,573	+				-0.5
1,915,574	-				+1.6
1,915,574	-				+0.9
1,915,574	-				-0.4
1,915,574	-				-0.1
1,915,574	-				-0.1
1,915,584	+				-0.7
1,915,584	+				-0.5
1,915,639	+				-0.5
1,915,639	+				+1.0
1,915,639	+				+1.6
1,915,639	+				-1.1
1,915,639	+				+0.1
1,915,639	+				+3.3
1,915,639	+				-0.3
1,915,639	+				-0.3
1,915,639	+				+2.3
1,915,639	+				-1.3
1,915,639	+				+0.5
1,915,639	+				-1.0
1,915,639	+				-1.5
1,915,639	+				-0.5
1,915,639	+				+0.6
1,915,639	+				-1.3
1,915,639	+				+0.6
1,915,639	+				-1.7
1,915,639	+				+0.3
1,915,639	+				+0.7
1,915,639	+				+0.7
1,915,639	+				+0.1
1,915,639	+				+0.3
1,915,639	+				+0.3
1,915,639	+				+0.9
1,915,639	+				+1.9
1,915,639	+				+0.4
1,915,639	+				+0.6
1,915,639	+				+0.8
1,915,639	+				-0.0
1,915,639	+				+0.1
1,915,639	+				+1.5
1,915,639	+				-1.0
1,915,639	+				-0.5
1,915,639	+				+1.0
1,915,639	+				+0.0
1,915,639	+				+1.3
1,915,639	+				+2.0
1,915,639	+				+0.1
1,915,639	+				-1.7
1,915,639	+				-1.0
1,915,639	+				-0.9
1,915,639	+				-0.3
1,915,639	+				-0.3
1,915,639	+				-1.5
1,915,640	-				-0.3
1,915,640	-				+0.5
1,915,640	-				-0.3
1,915,640	-				+0.1
1,915,640	-				+0.4
1,915,640	-				+0.2
1,915,640	-				-1.9
1,915,640	-				-1.0
1,915,640	-				+0.1
1,915,640	-				-0.2
1,915,640	-				-0.7
1,915,640	-				-1.5
1,915,640	-				-1.0
1,915,640	-				-0.6
1,915,640	-				-1.2
1,915,640	-				-0.9
1,915,640	-				-1.2
1,915,643	+				+0.3
1,915,643	+				-2.7
1,915,643	+				+1.4
1,915,643	+				+1.0
1,915,643	+				+1.6
1,915,643	+				+0.2
1,915,643	+				-0.3
1,915,643	+				+0.1
1,915,644	-				-0.7
1,915,644	-				-0.4
1,915,644	-				+1.1
1,915,644	-				-1.9
1,915,644	-				+0.5
1,915,644	-				+0.3
1,915,644	-				-0.3
1,915,644	-				+0.5
1,915,644	-				+0.5
1,915,644	-				+0.4
1,915,644	-				+0.5
1,915,680	+				+0.8
1,915,680	+				-0.7
1,915,680	+				-1.3
1,915,680	+				-0.0
1,915,680	+				+0.7
1,915,680	+				+1.1
1,915,680	+				+0.4
1,915,681	-				+0.3
1,915,681	-				-0.9
1,915,681	-				-0.6
1,915,681	-				+0.5
1,915,681	-				+0.4
1,915,738	+				-0.3
1,915,739	-				+2.0
1,915,770	+				-2.1
1,915,771	+				+0.1
1,915,771	+				-2.9
1,915,771	+				+0.3
1,915,771	+				+0.3
1,915,771	+				-0.5
1,915,771	+				-0.3
1,915,771	+				+1.3
1,915,771	+				+0.8
1,915,771	+				-0.9
1,915,772	-				-0.6
1,915,772	-				-0.3
1,915,772	-				+1.3
1,915,775	+				+0.5
1,915,775	+				-1.7
1,915,775	+				+0.4
1,915,775	+				+1.7
1,915,775	+				-0.7
1,915,775	+				+0.3
1,915,775	+				+1.0
1,915,775	+				+0.3
1,915,775	+				+0.3
1,915,775	+				+1.8
1,915,775	+				-0.8
1,915,775	+				+2.0
1,915,775	+				+0.5
1,915,775	+				-0.3
1,915,775	+				+2.3
1,915,775	+				+0.6
1,915,775	+				-0.0
1,915,775	+				-0.7
1,915,775	+				+0.4
1,915,775	+				+2.3
1,915,775	+				+0.1
1,915,775	+				+0.7
1,915,775	+				-0.3
1,915,775	+				-0.4
1,915,775	+				+0.9
1,915,776	-				+0.3
1,915,776	-				+0.7
1,915,776	-				+2.0
1,915,776	-				+0.1
1,915,776	-				-1.4
1,915,776	-				+0.9
1,915,776	-				+0.3
1,915,776	-				+0.3
1,915,776	-				-1.3
1,915,776	-				+0.4
1,915,776	-				-0.3
1,915,776	-				+1.3
1,915,776	-				+1.6
1,915,776	-				-0.9
1,915,776	-				+1.0
1,915,776	-				-0.0
1,915,776	-				+1.1
1,915,776	-				+0.1
1,915,776	-				-1.0
1,915,822	+				+0.4
1,915,822	+				+1.7
1,915,859	+				+0.5
1,915,859	+				-1.0
1,915,859	+				-0.7
1,915,859	+				-0.5
1,915,859	+				+3.9
1,915,859	+				-0.6
1,915,860	-				+0.7
1,915,860	-				+0.7
1,915,860	-				-1.0
1,915,860	-				-0.4
1,915,860	-				+0.1
1,915,934	+				+1.7
1,915,934	+				+1.0
1,915,935	-				-2.2
1,915,952	+				+0.2
1,915,953	-				+1.3
1,915,988	+		AO353_08720	0.11	+0.9
1,915,989	-		AO353_08720	0.11	+1.3
1,916,006	+		AO353_08720	0.11	+0.5
1,916,006	+		AO353_08720	0.11	-0.0
1,916,007	-		AO353_08720	0.11	-0.4
1,916,007	-		AO353_08720	0.11	+1.9
1,916,155	+		AO353_08720	0.16	-1.0
1,916,155	+		AO353_08720	0.16	+0.7
1,916,155	+		AO353_08720	0.16	+1.3
1,916,155	+		AO353_08720	0.16	-1.2
1,916,155	+		AO353_08720	0.16	+1.3
1,916,155	+		AO353_08720	0.16	-1.3
1,916,155	+		AO353_08720	0.16	-0.9
1,916,156	-		AO353_08720	0.16	-1.9
1,916,156	-		AO353_08720	0.16	-0.6
1,916,194	+		AO353_08720	0.18	+0.1
1,916,194	+		AO353_08720	0.18	+1.3
1,916,194	+		AO353_08720	0.18	-0.0
1,916,194	+		AO353_08720	0.18	+1.5
1,916,195	-		AO353_08720	0.18	-1.3
1,916,195	-		AO353_08720	0.18	+1.6
1,916,195	-		AO353_08720	0.18	-0.5
1,916,257	+		AO353_08720	0.20	+1.5
1,916,257	+		AO353_08720	0.20	+0.6
1,916,257	+		AO353_08720	0.20	+0.0
1,916,257	+		AO353_08720	0.20	-0.5
1,916,257	+		AO353_08720	0.20	+0.3
1,916,257	+		AO353_08720	0.20	+0.2
1,916,258	-		AO353_08720	0.20	-0.5
1,916,258	-		AO353_08720	0.20	+1.7
1,916,258	-		AO353_08720	0.20	-0.4
1,916,258	-		AO353_08720	0.20	+0.7
1,916,258	-		AO353_08720	0.20	-1.3
1,916,258	-		AO353_08720	0.20	-0.3
1,916,258	-		AO353_08720	0.20	-1.9
1,916,258	-		AO353_08720	0.20	-0.6
1,916,258	-		AO353_08720	0.20	+0.1
1,916,258	-		AO353_08720	0.20	-0.3
1,916,258	-		AO353_08720	0.20	+0.3
1,916,258	-		AO353_08720	0.20	-0.7
1,916,258	-		AO353_08720	0.20	-0.7