Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08225

Experiment: Choline Lysine 12 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 12 mM
1,807,777	+		AO353_08215	0.47	+0.5
1,807,777	+		AO353_08215	0.47	-1.1
1,807,777	+		AO353_08215	0.47	+0.2
1,807,777	+		AO353_08215	0.47	+1.0
1,807,778	-		AO353_08215	0.47	-1.5
1,807,778	-		AO353_08215	0.47	+1.6
1,807,841	+		AO353_08215	0.55	+2.2
1,807,978	+		AO353_08215	0.73	-1.5
1,807,978	+		AO353_08215	0.73	+1.5
1,807,978	+		AO353_08215	0.73	+0.7
1,808,113	+		AO353_08215	0.90	-0.4
1,808,114	-		AO353_08215	0.90	+0.2
1,808,127	+				+0.2
1,808,127	+				-0.8
1,808,127	+				-0.6
1,808,127	+				-0.4
1,808,127	+				+2.8
1,808,127	+				+0.9
1,808,128	-				-0.1
1,808,128	-				-0.5
1,808,128	-				+1.2
1,808,128	-				-1.6
1,808,128	-				-0.3
1,808,146	+				+0.8
1,808,146	+				+0.1
1,808,146	+				+2.2
1,808,146	+				-0.2
1,808,146	+				+0.0
1,808,147	-				+1.6
1,808,147	-				-2.5
1,808,150	+				+0.2
1,808,150	+				-1.0
1,808,150	+				+0.4
1,808,150	+				-0.6
1,808,151	-				+0.0
1,808,184	+				-2.6
1,808,184	+				+0.2
1,808,184	+				+0.7
1,808,184	+				+0.2
1,808,184	+				+0.2
1,808,185	-				+1.2
1,808,185	-				-0.2
1,808,185	-				+0.0
1,808,185	-				-0.1
1,808,234	+				-0.8
1,808,234	+				-1.1
1,808,234	+				-0.7
1,808,234	+				-1.5
1,808,234	+				-0.5
1,808,234	+				+0.1
1,808,234	+				+1.2
1,808,235	-				+0.2
1,808,235	-				-0.3
1,808,235	-				-1.8
1,808,235	-				+1.2
1,808,235	-				-0.1
1,808,235	-				-0.8
1,808,236	+				-0.2
1,808,236	+				-0.2
1,808,237	-				+1.2
1,808,237	-				+0.9
1,808,317	+				-2.3
1,808,317	+				+0.5
1,808,317	+				-0.2
1,808,317	+				+0.7
1,808,317	+				-0.4
1,808,317	+				+0.2
1,808,317	+				-1.8
1,808,317	+				-1.3
1,808,318	-				-0.8
1,808,318	-				+0.1
1,808,318	-				+0.2
1,808,318	-				-0.7
1,808,318	-				+0.2
1,808,365	+				-1.6
1,808,366	-				+0.8
1,808,624	+				-1.8
1,808,624	+				+2.8
1,808,625	-				-0.8
1,808,674	+				-0.2
1,808,674	+				-0.2
1,808,674	+				-0.5
1,808,675	-				+0.7
1,808,675	-				-0.8
1,808,675	-				-0.7
1,808,683	+				-0.3
1,808,684	+				+0.2
1,808,684	-				+1.7
1,808,684	-				+0.4
1,808,684	-				-2.1
1,808,684	-				+0.9
1,808,684	-				+1.4
1,808,790	+		AO353_08225	0.30	-0.1
1,808,790	+		AO353_08225	0.30	+0.5
1,808,791	-		AO353_08225	0.30	+1.8
1,808,791	-		AO353_08225	0.30	+0.8
1,808,831	+		AO353_08225	0.41	+1.6
1,808,831	+		AO353_08225	0.41	-0.4
1,808,831	+		AO353_08225	0.41	+0.7
1,808,831	+		AO353_08225	0.41	-1.3
1,808,832	-		AO353_08225	0.41	+1.2
1,808,883	-		AO353_08225	0.55	+1.0
1,808,883	-		AO353_08225	0.55	+0.2
1,808,883	-		AO353_08225	0.55	-1.6
1,808,883	-		AO353_08225	0.55	+0.2
1,808,916	+		AO353_08225	0.64	-0.2
1,808,916	+		AO353_08225	0.64	+0.5
1,808,916	+		AO353_08225	0.64	+1.5
1,808,916	+		AO353_08225	0.64	-0.6
1,808,916	+		AO353_08225	0.64	+0.9
1,808,916	+		AO353_08225	0.64	+0.3
1,808,917	-		AO353_08225	0.64	-0.5
1,808,917	-		AO353_08225	0.64	+1.4
1,808,917	-		AO353_08225	0.64	-0.8
1,808,917	-		AO353_08225	0.64	+1.5
1,808,947	-		AO353_08225	0.72	+0.9
1,809,085	+				-0.5
1,809,085	+				-1.6
1,809,085	+				-0.4
1,809,085	+				+0.2
1,809,085	+				-0.8
1,809,085	+				+2.2
1,809,085	+				-0.2
1,809,085	+				-0.4
1,809,085	+				+0.4
1,809,085	+				+0.5
1,809,085	+				-0.2
1,809,085	+				-1.2
1,809,085	+				+2.6
1,809,085	+				+0.7
1,809,086	-				+0.0
1,809,086	-				-0.2
1,809,086	-				-1.6
1,809,086	-				-2.1
1,809,086	-				-1.5
1,809,086	-				+1.5
1,809,086	-				-1.1
1,809,086	-				-1.2
1,809,086	-				+0.5
1,809,086	-				+0.8
1,809,086	-				-0.4
1,809,086	-				+0.9
1,809,086	-				+0.6
1,809,086	-				-0.4
1,809,086	-				+0.2
1,809,086	-				-0.7
1,809,086	-				-1.6
1,809,087	+				+0.2
1,809,087	+				-1.4
1,809,087	+				+0.2
1,809,087	+				-1.6
1,809,087	+				-1.0
1,809,087	+				-0.4
1,809,087	+				+1.2
1,809,087	+				-0.2
1,809,088	-				+0.9
1,809,088	-				-1.7
1,809,123	+				-0.4
1,809,123	+				-2.4
1,809,123	+				+1.0
1,809,123	+				+0.2
1,809,123	+				-1.0
1,809,123	+				+0.9
1,809,124	-				-0.2
1,809,124	-				+1.1
1,809,124	-				-0.5
1,809,124	-				+0.5
1,809,124	-				-1.4
1,809,124	-				-0.7
1,809,124	-				-1.9
1,809,134	+				-0.0
1,809,134	+				+0.6
1,809,134	+				-1.9
1,809,134	+				+0.6
1,809,135	-				+0.2
1,809,135	-				-0.4
1,809,276	+		AO353_08230	0.21	+0.2
1,809,277	-		AO353_08230	0.21	+0.4
1,809,577	+		AO353_08230	0.63	-0.4
1,809,577	+		AO353_08230	0.63	+1.0
1,809,577	+		AO353_08230	0.63	-0.8
1,809,577	+		AO353_08230	0.63	+1.2
1,809,577	+		AO353_08230	0.63	-1.8
1,809,578	-		AO353_08230	0.63	+1.4
1,809,578	-		AO353_08230	0.63	-0.1
1,809,578	-		AO353_08230	0.63	-0.2
1,809,578	-		AO353_08230	0.63	-0.7
1,809,578	-		AO353_08230	0.63	-0.2
1,809,739	+		AO353_08230	0.85	-0.4
1,809,739	+		AO353_08230	0.85	+0.2
1,809,739	+		AO353_08230	0.85	-0.8
1,809,739	+		AO353_08230	0.85	-0.2
1,809,740	-		AO353_08230	0.85	-1.3
1,809,740	-		AO353_08230	0.85	-0.2
1,809,740	-		AO353_08230	0.85	-1.6
1,809,740	-		AO353_08230	0.85	+0.1
1,809,740	-		AO353_08230	0.85	-2.1
1,809,740	-		AO353_08230	0.85	+1.0
1,809,740	-		AO353_08230	0.85	+0.6
1,809,740	-		AO353_08230	0.85	-1.1
1,809,740	-		AO353_08230	0.85	-0.2
1,809,740	-		AO353_08230	0.85	+0.2
1,809,740	-		AO353_08230	0.85	-1.9
1,809,743	+		AO353_08230	0.86	-0.3
1,809,743	+		AO353_08230	0.86	+0.8
1,809,743	+		AO353_08230	0.86	-0.9
1,809,743	+		AO353_08230	0.86	-0.2
1,809,743	+		AO353_08230	0.86	-0.6
1,809,743	+		AO353_08230	0.86	+1.2
1,809,743	+		AO353_08230	0.86	+2.4
1,809,743	+		AO353_08230	0.86	-1.3
1,809,743	+		AO353_08230	0.86	+0.6
1,809,743	+		AO353_08230	0.86	-0.2
1,809,744	-		AO353_08230	0.86	-1.3
1,809,744	-		AO353_08230	0.86	-0.6
1,809,744	-		AO353_08230	0.86	-2.4
1,809,744	-		AO353_08230	0.86	+0.2
1,809,744	-		AO353_08230	0.86	+1.2
1,809,744	-		AO353_08230	0.86	+2.0
1,809,744	-		AO353_08230	0.86	-0.1
1,809,795	+				-2.1
1,809,795	+				-0.1
1,809,796	-				+0.8
1,809,796	-				-0.1
1,809,796	-				+0.2
1,809,796	-				+0.7
1,809,796	-				-0.9
1,809,796	-				-0.1
1,809,799	+				-1.4
1,809,799	+				+0.2
1,809,799	+				+0.2
1,809,799	+				-0.6
1,809,799	+				-0.8
1,809,799	+				+0.2
1,809,799	+				-1.3
1,809,799	+				+1.1
1,809,800	-				+0.8
1,809,800	-				-0.6
1,809,800	-				-0.6
1,809,800	-				+1.2
1,809,800	-				-0.2
1,809,800	-				+1.1
1,809,800	-				+1.2
1,809,800	-				+0.2
1,809,865	-				+1.6
1,809,865	-				+0.7
1,809,865	-				+1.6
1,809,865	-				+0.2
1,809,927	-				-0.8
1,809,927	-				-0.2
1,809,927	-				+0.2
1,809,949	-				-0.8
1,810,015	+				-1.1