Experiment: MoYLS4 with HQNO 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0207 and DVU0208 overlap by 4 nucleotides DVU0208 and DVU0209 overlap by 17 nucleotides DVU0209 and DVU0210 are separated by 3 nucleotides DVU0210 and DVU0211 are separated by 49 nucleotides DVU0211 and DVU0212 overlap by 1 nucleotides DVU0212 and DVU0213 are separated by 199 nucleotides
DVU0207: DVU0207 - hypothetical protein (TIGR), at 249,572 to 249,898
DVU0207
DVU0208: DVU0208 - hypothetical protein (TIGR), at 249,895 to 250,452
DVU0208
DVU0209: DVU0209 - conserved hypothetical protein (TIGR), at 250,436 to 250,627
DVU0209
DVU0210: DVU0210 - tail sheath protein, putative (TIGR), at 250,631 to 252,094
DVU0210
DVU0211: DVU0211 - tail tube protein, putative (TIGR), at 252,144 to 252,509
DVU0211
DVU0212: DVU0212 - conserved hypothetical protein (TIGR), at 252,509 to 252,769
DVU0212
DVU0213: DVU0213 - conserved domain protein (TIGR), at 252,969 to 254,459
DVU0213
Position (kb) 250
251
252
253 Strain fitness (log2 ratio) -1
0
1 at 249.960 kb on + strand, within DVU0208 at 249.960 kb on + strand, within DVU0208 at 249.975 kb on + strand, within DVU0208 at 249.985 kb on - strand, within DVU0208 at 250.128 kb on + strand, within DVU0208 at 250.149 kb on - strand, within DVU0208 at 250.173 kb on - strand, within DVU0208 at 250.182 kb on - strand, within DVU0208 at 250.855 kb on + strand, within DVU0210 at 250.902 kb on - strand, within DVU0210 at 250.902 kb on - strand, within DVU0210 at 250.947 kb on + strand, within DVU0210 at 250.955 kb on - strand, within DVU0210 at 251.041 kb on + strand, within DVU0210 at 251.730 kb on - strand, within DVU0210 at 251.741 kb on - strand, within DVU0210 at 252.022 kb on + strand at 252.022 kb on + strand at 252.069 kb on + strand at 252.616 kb on - strand, within DVU0212 at 252.635 kb on - strand, within DVU0212 at 252.757 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with HQNO 100uM remove 249,960 + DVU0208 0.12 -0.3 249,960 + DVU0208 0.12 -0.6 249,975 + DVU0208 0.14 -0.5 249,985 - DVU0208 0.16 +0.0 250,128 + DVU0208 0.42 -0.6 250,149 - DVU0208 0.46 +0.2 250,173 - DVU0208 0.50 -0.5 250,182 - DVU0208 0.51 -0.1 250,855 + DVU0210 0.15 +0.3 250,902 - DVU0210 0.19 -0.2 250,902 - DVU0210 0.19 +0.2 250,947 + DVU0210 0.22 -0.0 250,955 - DVU0210 0.22 -0.2 251,041 + DVU0210 0.28 +1.4 251,730 - DVU0210 0.75 -0.1 251,741 - DVU0210 0.76 +0.4 252,022 + -0.3 252,022 + -0.4 252,069 + +0.2 252,616 - DVU0212 0.41 +0.1 252,635 - DVU0212 0.48 -0.2 252,757 - -0.6
Or see this region's nucleotide sequence