Experiment: MoYLS4 with HQNO 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0192 and DVU0193 overlap by 8 nucleotides DVU0193 and DVU0194 are separated by 16 nucleotides
DVU0192: DVU0192 - adenine specific DNA methyltransferase, putative (TIGR), at 237,390 to 238,748
DVU0192
DVU0193: DVU0193 - hypothetical protein (TIGR), at 238,741 to 239,472
DVU0193
DVU0194: DVU0194 - terminase, large subunit, putative (TIGR), at 239,489 to 241,447
DVU0194
Position (kb) 238
239
240 Strain fitness (log2 ratio) -1
0
1 at 237.771 kb on + strand, within DVU0192 at 237.778 kb on - strand, within DVU0192 at 237.798 kb on - strand, within DVU0192 at 237.798 kb on - strand, within DVU0192 at 237.844 kb on - strand, within DVU0192 at 237.854 kb on - strand, within DVU0192 at 237.854 kb on - strand, within DVU0192 at 237.869 kb on - strand, within DVU0192 at 237.984 kb on + strand, within DVU0192 at 238.075 kb on + strand, within DVU0192 at 238.186 kb on + strand, within DVU0192 at 238.192 kb on + strand, within DVU0192 at 238.209 kb on - strand, within DVU0192 at 239.001 kb on + strand, within DVU0193 at 239.009 kb on - strand, within DVU0193 at 239.050 kb on + strand, within DVU0193 at 239.053 kb on - strand, within DVU0193 at 239.054 kb on - strand, within DVU0193 at 239.060 kb on + strand, within DVU0193 at 239.081 kb on + strand, within DVU0193 at 239.089 kb on - strand, within DVU0193 at 239.089 kb on - strand, within DVU0193 at 239.300 kb on + strand, within DVU0193 at 239.310 kb on + strand, within DVU0193 at 239.404 kb on + strand at 239.467 kb on + strand at 239.511 kb on + strand at 239.519 kb on - strand at 239.519 kb on - strand at 239.644 kb on + strand at 239.647 kb on - strand at 239.699 kb on - strand, within DVU0194 at 239.764 kb on - strand, within DVU0194 at 239.896 kb on + strand, within DVU0194 at 239.933 kb on - strand, within DVU0194 at 239.939 kb on - strand, within DVU0194 at 239.965 kb on + strand, within DVU0194 at 240.053 kb on - strand, within DVU0194 at 240.273 kb on - strand, within DVU0194
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with HQNO 100uM remove 237,771 + DVU0192 0.28 -0.2 237,778 - DVU0192 0.29 -0.2 237,798 - DVU0192 0.30 -0.2 237,798 - DVU0192 0.30 +0.2 237,844 - DVU0192 0.33 +0.4 237,854 - DVU0192 0.34 -0.2 237,854 - DVU0192 0.34 +0.5 237,869 - DVU0192 0.35 +0.3 237,984 + DVU0192 0.44 +1.2 238,075 + DVU0192 0.50 +0.4 238,186 + DVU0192 0.59 +0.4 238,192 + DVU0192 0.59 +0.4 238,209 - DVU0192 0.60 -0.7 239,001 + DVU0193 0.36 +0.9 239,009 - DVU0193 0.37 +0.1 239,050 + DVU0193 0.42 +0.3 239,053 - DVU0193 0.43 -0.1 239,054 - DVU0193 0.43 +0.6 239,060 + DVU0193 0.44 +0.1 239,081 + DVU0193 0.46 +0.7 239,089 - DVU0193 0.48 +0.0 239,089 - DVU0193 0.48 -0.6 239,300 + DVU0193 0.76 +0.8 239,310 + DVU0193 0.78 +1.2 239,404 + +0.7 239,467 + -0.1 239,511 + -0.4 239,519 - -0.6 239,519 - -0.9 239,644 + -0.0 239,647 - -0.3 239,699 - DVU0194 0.11 -0.1 239,764 - DVU0194 0.14 +0.8 239,896 + DVU0194 0.21 -0.2 239,933 - DVU0194 0.23 -0.0 239,939 - DVU0194 0.23 -0.6 239,965 + DVU0194 0.24 -0.6 240,053 - DVU0194 0.29 -0.2 240,273 - DVU0194 0.40 -0.6
Or see this region's nucleotide sequence