Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2201

Experiment: D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.0625 mg/ml
2,280,548	-				-2.3
2,280,553	+				-1.3
2,280,583	-				-1.3
2,280,588	-				-1.9
2,280,597	-				+0.3
2,280,635	+				+1.3
2,280,635	+				-1.3
2,280,692	+		Synpcc7942_2200	0.22	-0.2
2,280,713	-		Synpcc7942_2200	0.26	+1.1
2,280,715	-		Synpcc7942_2200	0.26	+1.5
2,280,715	-		Synpcc7942_2200	0.26	-0.4
2,280,725	-		Synpcc7942_2200	0.28	-0.0
2,280,725	-		Synpcc7942_2200	0.28	-0.7
2,280,747	+		Synpcc7942_2200	0.33	+0.3
2,280,749	+		Synpcc7942_2200	0.33	-0.0
2,280,757	-		Synpcc7942_2200	0.35	-0.7
2,280,767	-		Synpcc7942_2200	0.37	+0.7
2,280,837	-		Synpcc7942_2200	0.51	-0.1
2,280,841	+		Synpcc7942_2200	0.52	-2.5
2,280,844	-		Synpcc7942_2200	0.52	-1.7
2,280,893	+		Synpcc7942_2200	0.62	+1.3
2,280,909	+		Synpcc7942_2200	0.66	-0.3
2,280,917	-		Synpcc7942_2200	0.67	+0.3
2,280,917	-		Synpcc7942_2200	0.67	+2.3
2,280,917	-		Synpcc7942_2200	0.67	+2.9
2,280,952	+		Synpcc7942_2200	0.74	-2.3
2,280,960	-		Synpcc7942_2200	0.76	-2.0
2,280,964	-		Synpcc7942_2200	0.77	+1.4
2,280,964	-		Synpcc7942_2200	0.77	+2.3
2,280,966	+		Synpcc7942_2200	0.77	-0.3
2,280,971	+		Synpcc7942_2200	0.78	+2.5
2,280,974	-		Synpcc7942_2200	0.79	+0.4
2,280,976	+		Synpcc7942_2200	0.79	-0.7
2,280,979	-		Synpcc7942_2200	0.80	+0.5
2,281,054	-				+0.6
2,281,082	+				+0.2
2,281,088	+				-1.6
2,281,090	-				-0.5
2,281,162	+				+1.0
2,281,326	+				-3.9
2,281,334	-				+0.3
2,282,504	+				-5.8
2,282,535	+				+0.3
2,282,557	+				+2.6
2,282,557	+				+0.1
2,282,557	+				-0.2
2,282,565	-				-3.0
2,282,587	-				-3.3
2,282,599	-				-1.3
2,282,608	-				-2.7
2,282,628	+				+0.3
2,282,681	+				+0.4
2,282,681	-				+1.3
2,282,708	+				+0.4
2,282,769	+	mcrA	Synpcc7942_2202	0.19	-2.5
2,282,777	-	mcrA	Synpcc7942_2202	0.21	-1.2
2,282,839	-	mcrA	Synpcc7942_2202	0.34	-2.0
2,282,864	+	mcrA	Synpcc7942_2202	0.39	-1.7
2,282,864	+				-1.3
2,282,865	+	mcrA	Synpcc7942_2202	0.39	+3.6
2,282,911	+	mcrA	Synpcc7942_2202	0.48	-0.1
2,283,059	+	mcrA	Synpcc7942_2202	0.78	-0.7
2,283,059	+	mcrA	Synpcc7942_2202	0.78	+0.6
2,283,064	+	mcrA	Synpcc7942_2202	0.79	-2.5
2,283,064	+	mcrA	Synpcc7942_2202	0.79	-2.0
2,283,067	-				+0.3
2,283,072	-	mcrA	Synpcc7942_2202	0.80	-1.1
2,283,072	-	mcrA	Synpcc7942_2202	0.80	-1.0
2,283,084	-	mcrA	Synpcc7942_2202	0.83	+1.4
2,283,117	+	mcrA	Synpcc7942_2202	0.89	-1.7
2,283,125	-				+3.2
2,283,181	+				+1.9
2,283,184	-				+0.9
2,283,189	-				+1.4
2,283,198	+				-2.5
2,283,208	+				-2.0