Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1717

Experiment: D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.0625 mg/ml
1,786,728	-		Synpcc7942_1716	0.75	-0.4
1,786,748	+		Synpcc7942_1716	0.76	-1.0
1,786,798	-		Synpcc7942_1716	0.77	-0.2
1,786,855	+		Synpcc7942_1716	0.78	+0.8
1,786,860	+		Synpcc7942_1716	0.79	-2.1
1,786,861	+		Synpcc7942_1716	0.79	-2.6
1,786,861	+		Synpcc7942_1716	0.79	-0.8
1,786,861	+		Synpcc7942_1716	0.79	-3.0
1,786,861	+		Synpcc7942_1716	0.79	+1.3
1,786,861	+		Synpcc7942_1716	0.79	+0.2
1,786,861	+		Synpcc7942_1716	0.79	+2.2
1,786,861	+		Synpcc7942_1716	0.79	+2.0
1,786,869	-		Synpcc7942_1716	0.79	+0.4
1,786,887	-		Synpcc7942_1716	0.79	-4.1
1,786,903	+		Synpcc7942_1716	0.80	+0.2
1,786,917	-		Synpcc7942_1716	0.80	-0.0
1,786,938	+		Synpcc7942_1716	0.81	-5.0
1,786,938	+		Synpcc7942_1716	0.81	-2.1
1,786,946	-		Synpcc7942_1716	0.81	+3.1
1,786,959	+		Synpcc7942_1716	0.81	+1.0
1,786,960	-				-0.8
1,787,043	-		Synpcc7942_1716	0.84	+1.6
1,787,083	+		Synpcc7942_1716	0.85	-0.9
1,787,084	+		Synpcc7942_1716	0.85	-3.8
1,787,104	-		Synpcc7942_1716	0.85	+3.0
1,787,135	+		Synpcc7942_1716	0.86	+2.4
1,787,154	-		Synpcc7942_1716	0.86	+1.4
1,787,156	-		Synpcc7942_1716	0.87	+1.4
1,787,157	-		Synpcc7942_1716	0.87	-2.1
1,787,159	+		Synpcc7942_1716	0.87	-4.0
1,787,159	+		Synpcc7942_1716	0.87	-0.8
1,787,160	-		Synpcc7942_1716	0.87	-1.4
1,787,233	-		Synpcc7942_1716	0.89	-2.3
1,787,295	-				-1.0
1,787,322	+				-0.1
1,787,331	-				+0.0
1,787,340	+				+1.1
1,787,341	+				-0.8
1,787,371	+				+0.2
1,787,382	+				+0.7
1,787,511	+				-1.3
1,787,517	+				+0.7
1,787,518	-				+0.4
1,787,555	+				-2.4
1,787,569	-				+3.6
1,787,648	-				+1.8
1,787,648	-				+0.2
1,787,648	-				+1.7
1,787,648	-				+2.9
1,787,692	-				-2.4
1,787,730	-				+0.5
1,787,777	-				-2.6
1,787,955	-	glcF	Synpcc7942_1717	0.18	-2.1
1,787,978	+	glcF	Synpcc7942_1717	0.20	-1.3
1,787,978	+	glcF	Synpcc7942_1717	0.20	-1.4
1,788,083	+	glcF	Synpcc7942_1717	0.28	-1.8
1,788,100	+	glcF	Synpcc7942_1717	0.29	-0.8
1,788,111	-	glcF	Synpcc7942_1717	0.30	-1.4
1,788,166	-	glcF	Synpcc7942_1717	0.34	-2.4
1,788,179	+	glcF	Synpcc7942_1717	0.35	-1.7
1,788,226	-	glcF	Synpcc7942_1717	0.39	-1.4
1,788,279	+	glcF	Synpcc7942_1717	0.43	-1.4
1,788,294	+	glcF	Synpcc7942_1717	0.44	-0.4
1,788,316	+	glcF	Synpcc7942_1717	0.45	-2.1
1,788,351	+	glcF	Synpcc7942_1717	0.48	-1.4
1,788,359	+	glcF	Synpcc7942_1717	0.49	+0.9
1,788,369	+	glcF	Synpcc7942_1717	0.50	-1.8
1,788,374	+				-0.8
1,788,447	+	glcF	Synpcc7942_1717	0.56	-2.5
1,788,447	+	glcF	Synpcc7942_1717	0.56	-1.5
1,788,447	+	glcF	Synpcc7942_1717	0.56	-2.7
1,788,455	-	glcF	Synpcc7942_1717	0.56	-2.1
1,788,455	-	glcF	Synpcc7942_1717	0.56	-1.8
1,788,475	+	glcF	Synpcc7942_1717	0.58	-1.0
1,788,491	+	glcF	Synpcc7942_1717	0.59	-3.8
1,788,512	+	glcF	Synpcc7942_1717	0.61	+2.2
1,788,527	+	glcF	Synpcc7942_1717	0.62	-1.4
1,788,527	+	glcF	Synpcc7942_1717	0.62	+0.2
1,788,535	-	glcF	Synpcc7942_1717	0.62	+2.2
1,788,535	-	glcF	Synpcc7942_1717	0.62	+0.6
1,788,536	-	glcF	Synpcc7942_1717	0.62	-1.8
1,788,536	-	glcF	Synpcc7942_1717	0.62	-1.0
1,788,619	-	glcF	Synpcc7942_1717	0.69	+3.2
1,788,619	-	glcF	Synpcc7942_1717	0.69	-1.2
1,788,627	+	glcF	Synpcc7942_1717	0.69	-3.6
1,788,659	+	glcF	Synpcc7942_1717	0.72	-1.8
1,788,667	-	glcF	Synpcc7942_1717	0.72	+0.7
1,788,672	-	glcF	Synpcc7942_1717	0.73	-2.1
1,788,672	-	glcF	Synpcc7942_1717	0.73	-1.4
1,788,709	+	glcF	Synpcc7942_1717	0.76	-1.4
1,788,709	+				-0.8
1,788,716	+	glcF	Synpcc7942_1717	0.76	-2.1
1,788,717	-	glcF	Synpcc7942_1717	0.76	-1.1
1,788,728	+	glcF	Synpcc7942_1717	0.77	-0.9
1,788,791	+	glcF	Synpcc7942_1717	0.82	-2.5
1,788,847	-	glcF	Synpcc7942_1717	0.86	+0.2
1,788,851	+	glcF	Synpcc7942_1717	0.87	-0.8
1,788,859	-	glcF	Synpcc7942_1717	0.87	-2.1
1,788,859	-	glcF	Synpcc7942_1717	0.87	-2.4
1,788,866	+	glcF	Synpcc7942_1717	0.88	-2.2
1,788,874	+	glcF	Synpcc7942_1717	0.88	-1.3
1,788,874	-	glcF	Synpcc7942_1717	0.88	-0.5
1,788,874	-	glcF	Synpcc7942_1717	0.88	-2.4
1,788,874	-	glcF	Synpcc7942_1717	0.88	-1.1
1,788,926	-				-0.8
1,788,932	+				-2.2
1,788,932	+				-0.8
1,788,932	+				+0.2
1,788,932	+				-0.5
1,788,932	+				-1.4
1,788,940	-				-3.1
1,788,940	-				-1.8
1,788,940	-				-0.8
1,788,940	-				-1.0
1,788,940	-				-0.8
1,788,940	-				-1.8
1,788,977	+				+0.6
1,788,985	-				-1.9
1,788,985	-				+0.2
1,789,033	+				-0.8
1,789,033	+				-3.1
1,789,033	+				+0.2
1,789,041	-				-3.7
1,789,041	-				+0.2
1,789,041	-				-2.4
1,789,073	-				-0.8
1,789,073	-				+0.8
1,789,073	-				-2.1
1,789,073	-				-1.4
1,789,123	-				-2.8
1,789,128	-				-1.8
1,789,132	-				-0.8
1,789,226	+	glcE	Synpcc7942_1718	0.15	-3.0
1,789,234	-	glcE	Synpcc7942_1718	0.16	-2.4
1,789,260	+	glcE	Synpcc7942_1718	0.18	-0.4
1,789,300	-	glcE	Synpcc7942_1718	0.21	-0.8
1,789,300	-	glcE	Synpcc7942_1718	0.21	-1.4
1,789,300	-	glcE	Synpcc7942_1718	0.21	-2.8
1,789,323	-	glcE	Synpcc7942_1718	0.23	-0.8
1,789,365	-	glcE	Synpcc7942_1718	0.26	+0.2
1,789,401	-	glcE	Synpcc7942_1718	0.29	-4.3
1,789,445	+	glcE	Synpcc7942_1718	0.33	-2.4
1,789,484	-	glcE	Synpcc7942_1718	0.36	+0.2
1,789,503	-	glcE	Synpcc7942_1718	0.37	+0.0
1,789,513	+	glcE	Synpcc7942_1718	0.38	-0.8
1,789,531	-	glcE	Synpcc7942_1718	0.39	-2.9
1,789,549	+	glcE	Synpcc7942_1718	0.41	-1.4
1,789,580	-	glcE	Synpcc7942_1718	0.43	+0.1
1,789,580	-	glcE	Synpcc7942_1718	0.43	-0.4
1,789,590	-	glcE	Synpcc7942_1718	0.44	-1.6
1,789,604	-				+1.8
1,789,677	+	glcE	Synpcc7942_1718	0.51	-1.4
1,789,685	-	glcE	Synpcc7942_1718	0.51	+0.5
1,789,685	-	glcE	Synpcc7942_1718	0.51	-0.4
1,789,687	+	glcE	Synpcc7942_1718	0.52	-0.8
1,789,728	-	glcE	Synpcc7942_1718	0.55	-0.4
1,789,740	+	glcE	Synpcc7942_1718	0.56	-1.8
1,789,740	+	glcE	Synpcc7942_1718	0.56	-0.8
1,789,785	+	glcE	Synpcc7942_1718	0.59	-4.1
1,789,797	+	glcE	Synpcc7942_1718	0.60	-1.1
1,789,797	+	glcE	Synpcc7942_1718	0.60	-2.4
1,789,798	+	glcE	Synpcc7942_1718	0.60	-3.0
1,789,798	-	glcE	Synpcc7942_1718	0.60	-1.4
1,789,805	-	glcE	Synpcc7942_1718	0.61	-0.9
1,789,886	-	glcE	Synpcc7942_1718	0.67	-2.4
1,789,914	+	glcE	Synpcc7942_1718	0.69	-3.1
1,789,924	+	glcE	Synpcc7942_1718	0.70	-1.5
1,789,936	+	glcE	Synpcc7942_1718	0.71	+1.4
1,789,936	+	glcE	Synpcc7942_1718	0.71	+2.0
1,789,944	-	glcE	Synpcc7942_1718	0.72	-1.8
1,789,944	-	glcE	Synpcc7942_1718	0.72	-1.9
1,789,948	+	glcE	Synpcc7942_1718	0.72	+1.9
1,789,949	+	glcE	Synpcc7942_1718	0.72	-2.1
1,789,992	-	glcE	Synpcc7942_1718	0.75	-1.4
1,790,000	+	glcE	Synpcc7942_1718	0.76	-3.1