Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1011

Experiment: D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.0625 mg/ml
1,021,973	-				+1.5
1,022,070	+		Synpcc7942_1010	0.14	+1.5
1,022,083	+		Synpcc7942_1010	0.16	-0.1
1,022,171	-		Synpcc7942_1010	0.28	-1.9
1,022,172	-		Synpcc7942_1010	0.28	-0.7
1,022,196	-		Synpcc7942_1010	0.31	-1.0
1,022,206	-		Synpcc7942_1010	0.32	+1.0
1,022,208	+		Synpcc7942_1010	0.33	-0.6
1,022,219	-		Synpcc7942_1010	0.34	+0.9
1,022,220	+		Synpcc7942_1010	0.34	+1.9
1,022,340	-		Synpcc7942_1010	0.51	-0.7
1,022,353	+		Synpcc7942_1010	0.52	-1.3
1,022,353	+		Synpcc7942_1010	0.52	-0.2
1,022,359	+		Synpcc7942_1010	0.53	-0.5
1,022,359	+		Synpcc7942_1010	0.53	-0.7
1,022,361	-		Synpcc7942_1010	0.54	-2.3
1,022,361	-		Synpcc7942_1010	0.54	+0.3
1,022,363	-		Synpcc7942_1010	0.54	+1.3
1,022,376	-		Synpcc7942_1010	0.56	-1.7
1,022,378	+		Synpcc7942_1010	0.56	+0.3
1,022,378	+		Synpcc7942_1010	0.56	-2.4
1,022,386	-		Synpcc7942_1010	0.57	-1.5
1,022,386	-		Synpcc7942_1010	0.57	-1.7
1,022,401	-		Synpcc7942_1010	0.59	+0.6
1,022,467	+		Synpcc7942_1010	0.68	-1.7
1,022,475	-		Synpcc7942_1010	0.69	-2.0
1,022,480	-		Synpcc7942_1010	0.70	-2.7
1,022,486	+		Synpcc7942_1010	0.71	+0.3
1,022,486	+		Synpcc7942_1010	0.71	-1.7
1,022,486	+		Synpcc7942_1010	0.71	-2.3
1,022,494	-		Synpcc7942_1010	0.72	-0.7
1,022,663	+				-0.3
1,022,685	+				+1.4
1,022,704	-				-1.3
1,022,706	+				+2.1
1,022,706	+				+0.3
1,022,714	-				+0.3
1,022,714	-				-1.4
1,022,716	-				+0.7
1,022,729	+				-0.7
1,022,729	+				+0.5
1,022,729	+				+0.3
1,022,737	-				+0.3
1,022,754	+				-0.1
1,022,754	+				-2.9
1,022,755	-				+0.9
1,022,755	-				+1.1
1,022,760	-				+5.9
1,022,777	+				-1.3
1,022,777	+				+1.3
1,022,785	-				-1.3
1,022,873	-				+0.3
1,022,892	+	sphS	Synpcc7942_1011	0.14	-2.5
1,022,892	+	sphS	Synpcc7942_1011	0.14	+0.0
1,022,919	-	sphS	Synpcc7942_1011	0.16	+2.5
1,022,920	+	sphS	Synpcc7942_1011	0.17	+0.5
1,022,943	-	sphS	Synpcc7942_1011	0.18	-2.5
1,022,943	-	sphS	Synpcc7942_1011	0.18	+2.8
1,022,978	+	sphS	Synpcc7942_1011	0.21	-1.3
1,022,978	+	sphS	Synpcc7942_1011	0.21	+1.9
1,022,981	-	sphS	Synpcc7942_1011	0.21	+2.1
1,022,981	-	sphS	Synpcc7942_1011	0.21	+3.9
1,022,986	-	sphS	Synpcc7942_1011	0.22	+1.5
1,022,991	+	sphS	Synpcc7942_1011	0.22	-0.4
1,023,006	+	sphS	Synpcc7942_1011	0.23	-0.5
1,023,014	-	sphS	Synpcc7942_1011	0.24	-1.9
1,023,014	-	sphS	Synpcc7942_1011	0.24	-1.1
1,023,026	+				-1.3
1,023,026	+	sphS	Synpcc7942_1011	0.25	+0.6
1,023,032	+	sphS	Synpcc7942_1011	0.26	-0.3
1,023,032	+	sphS	Synpcc7942_1011	0.26	+1.2
1,023,040	-	sphS	Synpcc7942_1011	0.26	-1.3
1,023,040	-	sphS	Synpcc7942_1011	0.26	+0.3
1,023,045	-	sphS	Synpcc7942_1011	0.27	-2.0
1,023,133	-	sphS	Synpcc7942_1011	0.34	+0.3
1,023,138	-				-0.7
1,023,140	-	sphS	Synpcc7942_1011	0.34	-1.7
1,023,145	-	sphS	Synpcc7942_1011	0.35	-2.6
1,023,154	+	sphS	Synpcc7942_1011	0.35	-0.4
1,023,180	-	sphS	Synpcc7942_1011	0.37	-1.7
1,023,185	+	sphS	Synpcc7942_1011	0.38	+1.9
1,023,185	+	sphS	Synpcc7942_1011	0.38	-0.7
1,023,185	+				+0.3
1,023,185	+	sphS	Synpcc7942_1011	0.38	-2.1
1,023,193	-	sphS	Synpcc7942_1011	0.38	+1.0
1,023,193	-	sphS	Synpcc7942_1011	0.38	-0.7
1,023,193	-	sphS	Synpcc7942_1011	0.38	+0.0
1,023,201	-	sphS	Synpcc7942_1011	0.39	+0.2
1,023,223	-	sphS	Synpcc7942_1011	0.41	-2.9
1,023,225	+	sphS	Synpcc7942_1011	0.41	-3.2
1,023,261	-	sphS	Synpcc7942_1011	0.44	-1.0
1,023,272	+	sphS	Synpcc7942_1011	0.45	-2.2
1,023,273	+	sphS	Synpcc7942_1011	0.45	+0.3
1,023,281	-	sphS	Synpcc7942_1011	0.46	+1.5
1,023,337	+	sphS	Synpcc7942_1011	0.50	-0.8
1,023,374	+	sphS	Synpcc7942_1011	0.53	+0.6
1,023,384	-	sphS	Synpcc7942_1011	0.54	+0.9
1,023,460	+	sphS	Synpcc7942_1011	0.60	+0.3
1,023,462	+	sphS	Synpcc7942_1011	0.60	-0.4
1,023,462	+	sphS	Synpcc7942_1011	0.60	+1.2
1,023,465	-	sphS	Synpcc7942_1011	0.60	-3.0
1,023,494	-	sphS	Synpcc7942_1011	0.63	-1.0
1,023,506	-	sphS	Synpcc7942_1011	0.64	+0.8
1,023,528	+	sphS	Synpcc7942_1011	0.65	-3.8
1,023,528	+	sphS	Synpcc7942_1011	0.65	+2.3
1,023,528	+	sphS	Synpcc7942_1011	0.65	-0.5
1,023,528	+	sphS	Synpcc7942_1011	0.65	-0.2
1,023,528	+	sphS	Synpcc7942_1011	0.65	-1.3
1,023,536	-	sphS	Synpcc7942_1011	0.66	+0.4
1,023,536	-	sphS	Synpcc7942_1011	0.66	+0.3
1,023,536	-	sphS	Synpcc7942_1011	0.66	+0.1
1,023,541	-	sphS	Synpcc7942_1011	0.67	-2.3
1,023,547	-	sphS	Synpcc7942_1011	0.67	+1.4
1,023,554	+	sphS	Synpcc7942_1011	0.68	-1.3
1,023,554	+	sphS	Synpcc7942_1011	0.68	-1.9
1,023,567	-	sphS	Synpcc7942_1011	0.69	-0.7
1,023,574	+	sphS	Synpcc7942_1011	0.69	-0.4
1,023,593	-	sphS	Synpcc7942_1011	0.71	+0.5
1,023,619	-	sphS	Synpcc7942_1011	0.73	-0.7
1,023,621	-	sphS	Synpcc7942_1011	0.73	-1.1
1,023,650	+	sphS	Synpcc7942_1011	0.75	+2.0
1,023,668	+	sphS	Synpcc7942_1011	0.77	-0.7
1,023,668	+	sphS	Synpcc7942_1011	0.77	+0.9
1,023,668	+	sphS	Synpcc7942_1011	0.77	-1.9
1,023,675	-	sphS	Synpcc7942_1011	0.77	-1.7
1,023,675	-	sphS	Synpcc7942_1011	0.77	+0.1
1,023,684	+	sphS	Synpcc7942_1011	0.78	+0.0
1,023,685	+	sphS	Synpcc7942_1011	0.78	+1.3
1,023,705	+	sphS	Synpcc7942_1011	0.80	+1.5
1,023,844	+				+0.3
1,023,848	-				+3.0
1,023,849	+				+1.1
1,023,876	-				-0.3
1,023,889	+				-0.3
1,023,899	-				+0.3
1,023,914	+				+2.0
1,023,916	-				+0.4
1,023,916	-				-0.5
1,023,965	-				-1.3
1,023,971	+				-0.7
1,023,971	+				-0.7
1,023,983	+				-0.8
1,023,998	-				-2.9
1,024,009	+				-0.7
1,024,029	+				-1.1
1,024,038	-				-0.7
1,024,099	+	sphR	Synpcc7942_1012	0.17	+1.1
1,024,160	+	sphR	Synpcc7942_1012	0.25	+1.6
1,024,168	-	sphR	Synpcc7942_1012	0.26	-1.3
1,024,246	-	sphR	Synpcc7942_1012	0.36	-2.3
1,024,291	-	sphR	Synpcc7942_1012	0.42	+2.6
1,024,291	-	sphR	Synpcc7942_1012	0.42	-0.5
1,024,291	-	sphR	Synpcc7942_1012	0.42	-0.7
1,024,301	-	sphR	Synpcc7942_1012	0.43	+3.1
1,024,304	-	sphR	Synpcc7942_1012	0.43	+0.9
1,024,306	+	sphR	Synpcc7942_1012	0.44	+0.2
1,024,306	+	sphR	Synpcc7942_1012	0.44	+0.2
1,024,312	-	sphR	Synpcc7942_1012	0.44	-1.9
1,024,336	-	sphR	Synpcc7942_1012	0.47	+0.5
1,024,404	-	sphR	Synpcc7942_1012	0.56	+0.3
1,024,411	-	sphR	Synpcc7942_1012	0.57	+1.4
1,024,411	-	sphR	Synpcc7942_1012	0.57	+1.3
1,024,430	+	sphR	Synpcc7942_1012	0.60	+3.7
1,024,430	+	sphR	Synpcc7942_1012	0.60	-1.4
1,024,470	+				-0.7
1,024,478	-	sphR	Synpcc7942_1012	0.66	-0.7
1,024,486	-	sphR	Synpcc7942_1012	0.67	-0.1
1,024,488	+	sphR	Synpcc7942_1012	0.67	-0.7
1,024,493	+	sphR	Synpcc7942_1012	0.68	+1.3
1,024,501	-	sphR	Synpcc7942_1012	0.69	+0.6
1,024,515	+	sphR	Synpcc7942_1012	0.71	+1.1
1,024,536	-	sphR	Synpcc7942_1012	0.73	+1.0
1,024,560	+	sphR	Synpcc7942_1012	0.76	-2.9
1,024,568	+	sphR	Synpcc7942_1012	0.77	-2.5
1,024,576	-	sphR	Synpcc7942_1012	0.78	-2.0
1,024,616	+	sphR	Synpcc7942_1012	0.84	-2.3
1,024,658	+	sphR	Synpcc7942_1012	0.89	+0.8
1,024,658	+	sphR	Synpcc7942_1012	0.89	-0.6
1,024,659	+	sphR	Synpcc7942_1012	0.89	-2.7
1,024,666	-				+0.6
1,024,721	+				+0.3
1,024,730	+				+2.4
1,024,730	+				+0.3
1,024,730	+				+1.0
1,024,738	-				-1.7
1,024,738	-				-0.3
1,024,756	+				-2.0
1,024,758	-				+0.3
1,024,758	-				-1.5
1,024,764	+				+0.8
1,024,766	+				+1.3
1,024,766	+				+0.4
1,024,774	+				+0.7
1,024,782	-				-1.0
1,024,782	-				-1.9
1,024,798	+				-0.5
1,024,800	+				-1.7
1,024,813	+				-1.3
1,024,815	-				-0.1
1,024,821	-				-0.6
1,024,822	-				-1.8
1,024,827	+				+0.3
1,024,859	+				+0.6
1,024,906	-				-0.8
1,024,915	-				-2.3