Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06574 and H281DRAFT_06575 are separated by 296 nucleotides H281DRAFT_06575 and H281DRAFT_06576 overlap by 8 nucleotides H281DRAFT_06576 and H281DRAFT_06577 overlap by 30 nucleotides H281DRAFT_06577 and H281DRAFT_06578 are separated by 174 nucleotides
H281DRAFT_06574: H281DRAFT_06574 - PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3), at 14,781 to 16,310
_06574
H281DRAFT_06575: H281DRAFT_06575 - PAS domain S-box-containing protein, at 16,607 to 18,796
_06575
H281DRAFT_06576: H281DRAFT_06576 - CheY chemotaxis protein or a CheY-like REC (receiver) domain, at 18,789 to 19,160
_06576
H281DRAFT_06577: H281DRAFT_06577 - hypothetical protein, at 19,131 to 19,541
_06577
H281DRAFT_06578: H281DRAFT_06578 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 19,716 to 20,573
_06578
Position (kb) 16
17
18
19 Strain fitness (log2 ratio) -2
-1
0
1
2 at 15.653 kb on + strand, within H281DRAFT_06574 at 15.653 kb on + strand, within H281DRAFT_06574 at 15.738 kb on - strand, within H281DRAFT_06574 at 15.738 kb on - strand, within H281DRAFT_06574 at 15.829 kb on - strand, within H281DRAFT_06574 at 15.903 kb on + strand, within H281DRAFT_06574 at 16.115 kb on + strand, within H281DRAFT_06574 at 16.115 kb on + strand, within H281DRAFT_06574 at 16.196 kb on + strand at 16.197 kb on - strand at 16.197 kb on - strand at 16.197 kb on - strand at 16.197 kb on - strand at 16.351 kb on - strand at 16.351 kb on - strand at 16.515 kb on + strand at 16.516 kb on - strand at 16.537 kb on - strand at 16.537 kb on - strand at 16.557 kb on + strand at 16.558 kb on - strand at 16.970 kb on - strand, within H281DRAFT_06575 at 16.970 kb on - strand, within H281DRAFT_06575 at 16.970 kb on - strand, within H281DRAFT_06575 at 17.107 kb on + strand, within H281DRAFT_06575 at 17.108 kb on - strand, within H281DRAFT_06575 at 17.171 kb on - strand, within H281DRAFT_06575 at 17.183 kb on + strand, within H281DRAFT_06575 at 17.184 kb on - strand, within H281DRAFT_06575 at 17.242 kb on - strand, within H281DRAFT_06575 at 17.242 kb on - strand, within H281DRAFT_06575 at 17.363 kb on - strand, within H281DRAFT_06575 at 17.363 kb on - strand, within H281DRAFT_06575 at 17.450 kb on + strand, within H281DRAFT_06575 at 17.451 kb on - strand, within H281DRAFT_06575 at 17.576 kb on + strand, within H281DRAFT_06575 at 17.576 kb on + strand, within H281DRAFT_06575 at 17.576 kb on + strand, within H281DRAFT_06575 at 17.615 kb on + strand, within H281DRAFT_06575 at 17.615 kb on + strand, within H281DRAFT_06575 at 17.615 kb on + strand, within H281DRAFT_06575 at 17.616 kb on - strand, within H281DRAFT_06575 at 17.616 kb on - strand, within H281DRAFT_06575 at 17.616 kb on - strand, within H281DRAFT_06575 at 17.628 kb on + strand, within H281DRAFT_06575 at 17.648 kb on + strand, within H281DRAFT_06575 at 17.648 kb on + strand, within H281DRAFT_06575 at 17.649 kb on - strand, within H281DRAFT_06575 at 17.693 kb on + strand, within H281DRAFT_06575 at 17.694 kb on - strand, within H281DRAFT_06575 at 17.694 kb on - strand, within H281DRAFT_06575 at 17.855 kb on + strand, within H281DRAFT_06575 at 17.882 kb on - strand, within H281DRAFT_06575 at 17.882 kb on - strand, within H281DRAFT_06575 at 17.888 kb on + strand, within H281DRAFT_06575 at 18.100 kb on + strand, within H281DRAFT_06575 at 18.100 kb on + strand, within H281DRAFT_06575 at 18.100 kb on + strand, within H281DRAFT_06575 at 18.101 kb on - strand, within H281DRAFT_06575 at 18.400 kb on + strand, within H281DRAFT_06575 at 18.401 kb on - strand, within H281DRAFT_06575 at 18.413 kb on - strand, within H281DRAFT_06575 at 18.413 kb on - strand, within H281DRAFT_06575 at 18.527 kb on + strand, within H281DRAFT_06575 at 18.527 kb on + strand, within H281DRAFT_06575 at 18.598 kb on + strand at 18.607 kb on + strand at 18.607 kb on + strand at 18.608 kb on - strand at 18.608 kb on - strand at 18.609 kb on + strand at 18.610 kb on - strand at 18.691 kb on - strand at 18.691 kb on - strand at 18.691 kb on - strand at 18.788 kb on + strand at 18.789 kb on - strand at 18.933 kb on - strand, within H281DRAFT_06576 at 19.044 kb on + strand, within H281DRAFT_06576 at 19.045 kb on - strand, within H281DRAFT_06576 at 19.045 kb on - strand, within H281DRAFT_06576 at 19.117 kb on + strand at 19.145 kb on + strand at 19.145 kb on + strand at 19.146 kb on - strand at 19.159 kb on - strand at 19.339 kb on + strand, within H281DRAFT_06577 at 19.340 kb on - strand, within H281DRAFT_06577 at 19.340 kb on - strand, within H281DRAFT_06577 at 19.436 kb on - strand, within H281DRAFT_06577 at 19.436 kb on - strand, within H281DRAFT_06577 at 19.483 kb on + strand, within H281DRAFT_06577 at 19.483 kb on + strand, within H281DRAFT_06577 at 19.483 kb on + strand, within H281DRAFT_06577 at 19.484 kb on - strand, within H281DRAFT_06577 at 19.484 kb on - strand, within H281DRAFT_06577 at 19.484 kb on - strand, within H281DRAFT_06577 at 19.542 kb on - strand at 19.638 kb on - strand at 19.721 kb on + strand at 19.721 kb on + strand at 19.722 kb on - strand at 19.758 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 15,653 + H281DRAFT_06574 0.57 -0.1 15,653 + H281DRAFT_06574 0.57 -0.2 15,738 - H281DRAFT_06574 0.63 +0.4 15,738 - H281DRAFT_06574 0.63 -0.1 15,829 - H281DRAFT_06574 0.68 -0.2 15,903 + H281DRAFT_06574 0.73 -1.1 16,115 + H281DRAFT_06574 0.87 +1.1 16,115 + H281DRAFT_06574 0.87 -0.4 16,196 + -0.2 16,197 - -0.7 16,197 - -0.0 16,197 - +1.1 16,197 - +0.9 16,351 - +0.4 16,351 - +0.4 16,515 + -2.1 16,516 - +0.0 16,537 - -0.3 16,537 - +0.1 16,557 + -0.3 16,558 - -0.8 16,970 - H281DRAFT_06575 0.17 -0.6 16,970 - H281DRAFT_06575 0.17 +0.5 16,970 - H281DRAFT_06575 0.17 -0.1 17,107 + H281DRAFT_06575 0.23 +0.7 17,108 - H281DRAFT_06575 0.23 -0.0 17,171 - H281DRAFT_06575 0.26 -0.5 17,183 + H281DRAFT_06575 0.26 +0.0 17,184 - H281DRAFT_06575 0.26 +2.0 17,242 - H281DRAFT_06575 0.29 +0.3 17,242 - H281DRAFT_06575 0.29 +0.9 17,363 - H281DRAFT_06575 0.35 +0.6 17,363 - H281DRAFT_06575 0.35 +0.3 17,450 + H281DRAFT_06575 0.38 +0.3 17,451 - H281DRAFT_06575 0.39 +0.1 17,576 + H281DRAFT_06575 0.44 +0.9 17,576 + H281DRAFT_06575 0.44 +0.6 17,576 + H281DRAFT_06575 0.44 -0.6 17,615 + H281DRAFT_06575 0.46 +0.3 17,615 + H281DRAFT_06575 0.46 +0.4 17,615 + H281DRAFT_06575 0.46 -0.9 17,616 - H281DRAFT_06575 0.46 -0.4 17,616 - H281DRAFT_06575 0.46 +0.6 17,616 - H281DRAFT_06575 0.46 +0.5 17,628 + H281DRAFT_06575 0.47 +0.5 17,648 + H281DRAFT_06575 0.48 -0.2 17,648 + H281DRAFT_06575 0.48 +0.2 17,649 - H281DRAFT_06575 0.48 -0.4 17,693 + H281DRAFT_06575 0.50 -1.0 17,694 - H281DRAFT_06575 0.50 -0.3 17,694 - H281DRAFT_06575 0.50 -1.5 17,855 + H281DRAFT_06575 0.57 +0.9 17,882 - H281DRAFT_06575 0.58 -0.0 17,882 - H281DRAFT_06575 0.58 -0.8 17,888 + H281DRAFT_06575 0.58 -0.1 18,100 + H281DRAFT_06575 0.68 +0.1 18,100 + H281DRAFT_06575 0.68 +0.3 18,100 + H281DRAFT_06575 0.68 -0.6 18,101 - H281DRAFT_06575 0.68 -0.2 18,400 + H281DRAFT_06575 0.82 +0.7 18,401 - H281DRAFT_06575 0.82 +1.3 18,413 - H281DRAFT_06575 0.82 +0.6 18,413 - H281DRAFT_06575 0.82 +0.1 18,527 + H281DRAFT_06575 0.88 -0.3 18,527 + H281DRAFT_06575 0.88 +1.3 18,598 + +0.9 18,607 + +0.1 18,607 + -0.5 18,608 - +0.3 18,608 - -0.5 18,609 + -0.4 18,610 - +0.1 18,691 - -0.9 18,691 - -0.5 18,691 - -1.9 18,788 + -0.5 18,789 - -0.3 18,933 - H281DRAFT_06576 0.39 +1.4 19,044 + H281DRAFT_06576 0.69 -0.2 19,045 - H281DRAFT_06576 0.69 +0.9 19,045 - H281DRAFT_06576 0.69 +1.6 19,117 + -0.5 19,145 + +1.0 19,145 + -1.3 19,146 - +1.0 19,159 - -1.2 19,339 + H281DRAFT_06577 0.51 -0.2 19,340 - H281DRAFT_06577 0.51 -0.3 19,340 - H281DRAFT_06577 0.51 +0.1 19,436 - H281DRAFT_06577 0.74 +0.0 19,436 - H281DRAFT_06577 0.74 -0.9 19,483 + H281DRAFT_06577 0.86 +1.0 19,483 + H281DRAFT_06577 0.86 +0.9 19,483 + H281DRAFT_06577 0.86 +0.8 19,484 - H281DRAFT_06577 0.86 +0.1 19,484 - H281DRAFT_06577 0.86 +0.2 19,484 - H281DRAFT_06577 0.86 +0.3 19,542 - +0.7 19,638 - -0.3 19,721 + +0.5 19,721 + +1.1 19,722 - +0.4 19,758 - -0.2
Or see this region's nucleotide sequence