Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04893 and H281DRAFT_04894 are separated by 77 nucleotides H281DRAFT_04894 and H281DRAFT_04895 are separated by 71 nucleotides H281DRAFT_04895 and H281DRAFT_04896 are separated by 102 nucleotides
H281DRAFT_04893: H281DRAFT_04893 - transcriptional regulator, LysR family, at 43,475 to 44,398
_04893
H281DRAFT_04894: H281DRAFT_04894 - inner membrane transporter RhtA, at 44,476 to 45,366
_04894
H281DRAFT_04895: H281DRAFT_04895 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 45,438 to 45,989
_04895
H281DRAFT_04896: H281DRAFT_04896 - transcriptional regulator, AraC family with amidase-like domain, at 46,092 to 47,087
_04896
Position (kb) 44
45
46 Strain fitness (log2 ratio) -1
0
1 at 43.962 kb on - strand, within H281DRAFT_04893 at 43.962 kb on - strand, within H281DRAFT_04893 at 44.406 kb on - strand at 44.419 kb on - strand at 44.711 kb on - strand, within H281DRAFT_04894 at 44.797 kb on - strand, within H281DRAFT_04894 at 44.999 kb on - strand, within H281DRAFT_04894 at 45.170 kb on + strand, within H281DRAFT_04894 at 45.297 kb on + strand at 45.461 kb on - strand at 45.463 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 43,962 - H281DRAFT_04893 0.53 +0.1 43,962 - H281DRAFT_04893 0.53 -0.6 44,406 - +0.1 44,419 - -0.1 44,711 - H281DRAFT_04894 0.26 -0.1 44,797 - H281DRAFT_04894 0.36 -0.6 44,999 - H281DRAFT_04894 0.59 +1.2 45,170 + H281DRAFT_04894 0.78 +0.6 45,297 + -0.3 45,461 - -0.1 45,463 - -1.1
Or see this region's nucleotide sequence