Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03484

Experiment: 2-Deoxy-D-Ribose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03483 and H281DRAFT_03484 are separated by 307 nucleotidesH281DRAFT_03484 and H281DRAFT_03485 are separated by 2 nucleotides H281DRAFT_03483: H281DRAFT_03483 - Major Facilitator Superfamily protein, at 567,297 to 568,649 _03483 H281DRAFT_03484: H281DRAFT_03484 - osmoprotectant transport system permease protein, at 568,957 to 569,682 _03484 H281DRAFT_03485: H281DRAFT_03485 - osmoprotectant transport system ATP-binding protein, at 569,685 to 570,803 _03485 Position (kb) 568 569 570Strain fitness (log2 ratio) -1 0 1at 568.054 kb on - strand, within H281DRAFT_03483at 568.054 kb on - strand, within H281DRAFT_03483at 568.162 kb on - strand, within H281DRAFT_03483at 568.310 kb on - strandat 568.396 kb on - strand, within H281DRAFT_03483at 568.900 kb on - strandat 569.021 kb on + strandat 569.119 kb on + strand, within H281DRAFT_03484at 569.120 kb on - strand, within H281DRAFT_03484at 569.270 kb on - strandat 569.441 kb on - strand, within H281DRAFT_03484at 569.442 kb on + strand, within H281DRAFT_03484at 569.630 kb on + strandat 570.257 kb on + strand, within H281DRAFT_03485at 570.258 kb on - strand, within H281DRAFT_03485at 570.653 kb on + strand, within H281DRAFT_03485

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C)
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568,054 - H281DRAFT_03483 0.56 -0.3
568,054 - H281DRAFT_03483 0.56 -0.0
568,162 - H281DRAFT_03483 0.64 +0.6
568,310 - +1.6
568,396 - H281DRAFT_03483 0.81 -0.1
568,900 - +0.1
569,021 + +0.8
569,119 + H281DRAFT_03484 0.22 +0.9
569,120 - H281DRAFT_03484 0.22 +0.3
569,270 - +0.6
569,441 - H281DRAFT_03484 0.67 +0.2
569,442 + H281DRAFT_03484 0.67 +0.6
569,630 + +0.6
570,257 + H281DRAFT_03485 0.51 +0.3
570,258 - H281DRAFT_03485 0.51 -0.6
570,653 + H281DRAFT_03485 0.87 +0.3

Or see this region's nucleotide sequence