Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03301 and H281DRAFT_03302 are separated by 57 nucleotides H281DRAFT_03302 and H281DRAFT_03303 are separated by 148 nucleotides H281DRAFT_03303 and H281DRAFT_03304 are separated by 93 nucleotides H281DRAFT_03304 and H281DRAFT_03305 are separated by 282 nucleotides
H281DRAFT_03301: H281DRAFT_03301 - oxidoreductase alpha (molybdopterin) subunit, at 362,214 to 364,520
_03301
H281DRAFT_03302: H281DRAFT_03302 - Hemerythrin HHE cation binding domain-containing protein, at 364,578 to 365,165
_03302
H281DRAFT_03303: H281DRAFT_03303 - NAD+ synthase (glutamine-hydrolysing), at 365,314 to 367,362
_03303
H281DRAFT_03304: H281DRAFT_03304 - amidohydrolase, PncC family, at 367,456 to 367,989
_03304
H281DRAFT_03305: H281DRAFT_03305 - Acetyltransferases, at 368,272 to 368,781
_03305
Position (kb) 365
366
367
368 Strain fitness (log2 ratio) -1
0
1
2 at 364.673 kb on + strand, within H281DRAFT_03302 at 364.674 kb on - strand, within H281DRAFT_03302 at 364.682 kb on + strand, within H281DRAFT_03302 at 365.106 kb on - strand, within H281DRAFT_03302 at 365.513 kb on + strand at 365.628 kb on - strand, within H281DRAFT_03303 at 365.628 kb on - strand, within H281DRAFT_03303 at 366.172 kb on - strand, within H281DRAFT_03303 at 366.320 kb on + strand, within H281DRAFT_03303 at 367.182 kb on + strand at 367.739 kb on - strand, within H281DRAFT_03304
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 364,673 + H281DRAFT_03302 0.16 +1.2 364,674 - H281DRAFT_03302 0.16 +0.3 364,682 + H281DRAFT_03302 0.18 -0.1 365,106 - H281DRAFT_03302 0.90 +0.3 365,513 + +0.2 365,628 - H281DRAFT_03303 0.15 +1.9 365,628 - H281DRAFT_03303 0.15 +0.1 366,172 - H281DRAFT_03303 0.42 +1.1 366,320 + H281DRAFT_03303 0.49 -0.6 367,182 + +0.2 367,739 - H281DRAFT_03304 0.53 -0.8
Or see this region's nucleotide sequence