Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00178 and H281DRAFT_00179 are separated by 92 nucleotides H281DRAFT_00179 and H281DRAFT_00180 are separated by 259 nucleotides
H281DRAFT_00178: H281DRAFT_00178 - agmatinase, at 192,057 to 193,046
_00178
H281DRAFT_00179: H281DRAFT_00179 - nucleobase:cation symporter-1, NCS1 family, at 193,139 to 194,455
_00179
H281DRAFT_00180: H281DRAFT_00180 - Recombination protein MgsA, at 194,715 to 196,028
_00180
Position (kb) 193
194
195 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 192.295 kb on - strand, within H281DRAFT_00178 at 192.295 kb on - strand, within H281DRAFT_00178 at 192.370 kb on - strand, within H281DRAFT_00178 at 192.418 kb on + strand, within H281DRAFT_00178 at 192.419 kb on - strand, within H281DRAFT_00178 at 192.419 kb on - strand, within H281DRAFT_00178 at 192.419 kb on - strand, within H281DRAFT_00178 at 192.660 kb on + strand, within H281DRAFT_00178 at 192.789 kb on + strand, within H281DRAFT_00178 at 192.789 kb on + strand, within H281DRAFT_00178 at 192.790 kb on - strand, within H281DRAFT_00178 at 192.791 kb on + strand, within H281DRAFT_00178 at 193.121 kb on + strand at 193.157 kb on - strand at 193.179 kb on + strand at 193.179 kb on + strand at 193.179 kb on - strand at 193.252 kb on - strand at 193.350 kb on - strand, within H281DRAFT_00179 at 193.456 kb on + strand, within H281DRAFT_00179 at 193.456 kb on + strand, within H281DRAFT_00179 at 193.456 kb on + strand, within H281DRAFT_00179 at 193.457 kb on - strand, within H281DRAFT_00179 at 193.674 kb on + strand, within H281DRAFT_00179 at 193.675 kb on - strand, within H281DRAFT_00179 at 193.675 kb on - strand, within H281DRAFT_00179 at 193.770 kb on + strand, within H281DRAFT_00179 at 194.301 kb on - strand, within H281DRAFT_00179 at 194.301 kb on - strand, within H281DRAFT_00179 at 194.301 kb on - strand, within H281DRAFT_00179 at 194.415 kb on + strand at 194.416 kb on - strand at 194.511 kb on + strand at 194.512 kb on - strand at 194.512 kb on - strand at 194.512 kb on - strand at 194.572 kb on - strand at 194.700 kb on + strand at 194.701 kb on - strand at 194.772 kb on - strand at 195.025 kb on + strand, within H281DRAFT_00180 at 195.026 kb on - strand, within H281DRAFT_00180 at 195.441 kb on + strand, within H281DRAFT_00180
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 192,295 - H281DRAFT_00178 0.24 -0.2 192,295 - H281DRAFT_00178 0.24 -0.0 192,370 - H281DRAFT_00178 0.32 -0.5 192,418 + H281DRAFT_00178 0.36 +0.1 192,419 - H281DRAFT_00178 0.37 -0.7 192,419 - H281DRAFT_00178 0.37 +0.1 192,419 - H281DRAFT_00178 0.37 -0.1 192,660 + H281DRAFT_00178 0.61 +0.1 192,789 + H281DRAFT_00178 0.74 +1.2 192,789 + H281DRAFT_00178 0.74 +0.2 192,790 - H281DRAFT_00178 0.74 -0.4 192,791 + H281DRAFT_00178 0.74 -0.4 193,121 + +0.1 193,157 - +0.0 193,179 + +0.7 193,179 + +0.6 193,179 - -0.1 193,252 - -2.8 193,350 - H281DRAFT_00179 0.16 -0.9 193,456 + H281DRAFT_00179 0.24 +0.8 193,456 + H281DRAFT_00179 0.24 +0.8 193,456 + H281DRAFT_00179 0.24 -0.3 193,457 - H281DRAFT_00179 0.24 +0.7 193,674 + H281DRAFT_00179 0.41 +1.2 193,675 - H281DRAFT_00179 0.41 +0.3 193,675 - H281DRAFT_00179 0.41 +0.7 193,770 + H281DRAFT_00179 0.48 +0.1 194,301 - H281DRAFT_00179 0.88 +1.7 194,301 - H281DRAFT_00179 0.88 +0.1 194,301 - H281DRAFT_00179 0.88 +0.1 194,415 + -0.1 194,416 - -0.1 194,511 + -0.1 194,512 - -0.2 194,512 - +1.2 194,512 - +0.3 194,572 - -1.1 194,700 + +0.9 194,701 - -0.4 194,772 - +2.5 195,025 + H281DRAFT_00180 0.24 +0.0 195,026 - H281DRAFT_00180 0.24 -0.2 195,441 + H281DRAFT_00180 0.55 +0.3
Or see this region's nucleotide sequence