Strain Fitness in Dechlorosoma suillum PS around Dsui_3052

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3050 and Dsui_3051 are separated by 70 nucleotidesDsui_3051 and Dsui_3052 are separated by 467 nucleotidesDsui_3052 and Dsui_3053 are separated by 228 nucleotides Dsui_3050: Dsui_3050 - NADH:ubiquinone oxidoreductase subunit 3 (chain A), at 3,265,763 to 3,266,137 _3050 Dsui_3051: Dsui_3051 - tRNA-Leu, at 3,266,208 to 3,266,292 _3051 Dsui_3052: Dsui_3052 - triosephosphate isomerase, at 3,266,760 to 3,267,485 _3052 Dsui_3053: Dsui_3053 - phosphate ABC transporter, ATP-binding protein, at 3,267,714 to 3,268,490 _3053 Position (kb) 3266 3267 3268Strain fitness (log2 ratio) -3 -2 -1 0 1at 3265.762 kb on - strandat 3265.769 kb on - strandat 3265.790 kb on - strandat 3265.790 kb on - strandat 3265.790 kb on - strandat 3267.529 kb on - strandat 3267.546 kb on - strandat 3267.546 kb on - strandat 3267.546 kb on - strandat 3267.546 kb on - strandat 3267.561 kb on - strandat 3267.610 kb on - strandat 3267.621 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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3,265,762 - +0.4
3,265,769 - -0.0
3,265,790 - -3.7
3,265,790 - -0.3
3,265,790 - -1.6
3,267,529 - -1.2
3,267,546 - +0.6
3,267,546 - +1.2
3,267,546 - -0.5
3,267,546 - -0.5
3,267,561 - -1.0
3,267,610 - -1.0
3,267,621 + -1.7

Or see this region's nucleotide sequence