Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2679 and Dsui_2680 are separated by 3 nucleotides Dsui_2680 and Dsui_2681 overlap by 20 nucleotides Dsui_2681 and Dsui_2682 are separated by 4 nucleotides Dsui_2682 and Dsui_2683 are separated by 4 nucleotides
Dsui_2679: Dsui_2679 - rRNA methylase, at 2,831,642 to 2,832,418
_2679
Dsui_2680: Dsui_2680 - ribonuclease HII, at 2,832,422 to 2,833,018
_2680
Dsui_2681: Dsui_2681 - lipid-A-disaccharide synthase, at 2,832,999 to 2,834,186
_2681
Dsui_2682: Dsui_2682 - acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase, at 2,834,191 to 2,834,961
_2682
Dsui_2683: Dsui_2683 - beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ, at 2,834,966 to 2,835,403
_2683
Position (kb)
2832
2833
2834
2835 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2832.060 kb on + strand, within Dsui_2679 at 2832.062 kb on + strand, within Dsui_2679 at 2832.114 kb on + strand, within Dsui_2679 at 2832.179 kb on + strand, within Dsui_2679 at 2832.179 kb on + strand, within Dsui_2679 at 2832.187 kb on - strand, within Dsui_2679 at 2832.201 kb on - strand, within Dsui_2679 at 2832.234 kb on + strand, within Dsui_2679 at 2832.247 kb on - strand, within Dsui_2679 at 2832.347 kb on + strand at 2832.420 kb on + strand at 2832.420 kb on + strand at 2832.428 kb on - strand at 2832.443 kb on - strand at 2832.460 kb on + strand at 2832.492 kb on - strand, within Dsui_2680 at 2832.523 kb on + strand, within Dsui_2680 at 2832.544 kb on + strand, within Dsui_2680 at 2832.585 kb on - strand, within Dsui_2680 at 2832.611 kb on - strand, within Dsui_2680 at 2832.651 kb on + strand, within Dsui_2680 at 2832.659 kb on - strand, within Dsui_2680 at 2832.814 kb on - strand, within Dsui_2680 at 2832.859 kb on - strand, within Dsui_2680 at 2832.911 kb on - strand, within Dsui_2680
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,832,060 + Dsui_2679 0.54 -1.4 2,832,062 + Dsui_2679 0.54 +1.5 2,832,114 + Dsui_2679 0.61 +0.8 2,832,179 + Dsui_2679 0.69 +1.5 2,832,179 + Dsui_2679 0.69 -1.2 2,832,187 - Dsui_2679 0.70 +0.9 2,832,201 - Dsui_2679 0.72 +1.5 2,832,234 + Dsui_2679 0.76 +0.0 2,832,247 - Dsui_2679 0.78 +4.5 2,832,347 + -1.5 2,832,420 + -0.2 2,832,420 + +1.0 2,832,428 - +2.2 2,832,443 - +1.2 2,832,460 + +1.3 2,832,492 - Dsui_2680 0.12 -1.4 2,832,523 + Dsui_2680 0.17 +0.0 2,832,544 + Dsui_2680 0.20 +1.1 2,832,585 - Dsui_2680 0.27 +1.2 2,832,611 - Dsui_2680 0.32 +1.4 2,832,651 + Dsui_2680 0.38 +1.6 2,832,659 - Dsui_2680 0.40 +1.1 2,832,814 - Dsui_2680 0.66 +1.1 2,832,859 - Dsui_2680 0.73 +1.3 2,832,911 - Dsui_2680 0.82 +1.1
Or see this region's nucleotide sequence