Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1794 and Dsui_1795 are separated by 677 nucleotides Dsui_1795 and Dsui_1796 are separated by 144 nucleotides
Dsui_1794: Dsui_1794 - putative transcriptional regulator, at 1,894,222 to 1,894,485
_1794
Dsui_1795: Dsui_1795 - hypothetical protein, at 1,895,163 to 1,895,501
_1795
Dsui_1796: Dsui_1796 - phage/plasmid-related protein TIGR03299, at 1,895,646 to 1,896,614
_1796
Position (kb)
1895
1896 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1894.168 kb on + strand at 1894.176 kb on - strand at 1894.179 kb on + strand at 1894.179 kb on + strand at 1894.179 kb on + strand at 1894.179 kb on + strand at 1894.179 kb on + strand at 1894.186 kb on + strand at 1894.187 kb on - strand at 1894.187 kb on - strand at 1894.187 kb on - strand at 1894.187 kb on - strand at 1894.187 kb on - strand at 1894.191 kb on + strand at 1894.196 kb on + strand at 1894.199 kb on - strand at 1894.219 kb on + strand at 1894.219 kb on + strand at 1894.219 kb on + strand at 1894.227 kb on - strand at 1894.227 kb on - strand at 1894.246 kb on - strand at 1894.246 kb on - strand at 1894.248 kb on + strand at 1894.248 kb on + strand at 1894.248 kb on + strand at 1894.248 kb on + strand at 1894.248 kb on + strand at 1894.248 kb on + strand at 1894.256 kb on - strand, within Dsui_1794 at 1894.256 kb on - strand, within Dsui_1794 at 1894.256 kb on - strand, within Dsui_1794 at 1894.256 kb on - strand, within Dsui_1794 at 1894.257 kb on - strand, within Dsui_1794 at 1894.262 kb on - strand, within Dsui_1794 at 1894.272 kb on - strand, within Dsui_1794 at 1894.300 kb on - strand, within Dsui_1794 at 1894.320 kb on + strand, within Dsui_1794 at 1894.342 kb on - strand, within Dsui_1794 at 1894.351 kb on - strand, within Dsui_1794 at 1894.374 kb on + strand, within Dsui_1794 at 1894.375 kb on - strand, within Dsui_1794 at 1894.399 kb on - strand, within Dsui_1794 at 1894.402 kb on - strand, within Dsui_1794 at 1894.404 kb on - strand, within Dsui_1794 at 1894.405 kb on + strand, within Dsui_1794 at 1894.405 kb on + strand, within Dsui_1794 at 1894.417 kb on + strand, within Dsui_1794 at 1894.417 kb on + strand, within Dsui_1794 at 1894.421 kb on - strand, within Dsui_1794 at 1894.421 kb on - strand, within Dsui_1794 at 1894.423 kb on + strand, within Dsui_1794 at 1894.431 kb on - strand, within Dsui_1794 at 1894.435 kb on - strand, within Dsui_1794 at 1894.435 kb on - strand, within Dsui_1794 at 1894.435 kb on - strand, within Dsui_1794 at 1894.436 kb on + strand, within Dsui_1794 at 1894.446 kb on + strand, within Dsui_1794 at 1894.446 kb on + strand, within Dsui_1794 at 1894.454 kb on - strand, within Dsui_1794 at 1894.454 kb on - strand, within Dsui_1794 at 1894.454 kb on - strand, within Dsui_1794 at 1894.454 kb on - strand, within Dsui_1794 at 1894.454 kb on - strand, within Dsui_1794 at 1894.454 kb on - strand, within Dsui_1794 at 1894.454 kb on - strand, within Dsui_1794 at 1894.468 kb on - strand at 1894.485 kb on - strand at 1894.500 kb on - strand at 1894.507 kb on + strand at 1894.509 kb on - strand at 1894.523 kb on + strand at 1894.525 kb on + strand at 1894.525 kb on + strand at 1894.533 kb on - strand at 1894.533 kb on - strand at 1894.563 kb on + strand at 1894.567 kb on + strand at 1894.588 kb on + strand at 1894.596 kb on - strand at 1894.596 kb on - strand at 1894.618 kb on + strand at 1894.644 kb on + strand at 1894.652 kb on - strand at 1894.680 kb on + strand at 1894.680 kb on + strand at 1894.680 kb on + strand at 1894.680 kb on + strand at 1894.680 kb on + strand at 1894.680 kb on + strand at 1894.680 kb on + strand at 1894.680 kb on + strand at 1894.680 kb on + strand at 1894.788 kb on + strand at 1894.788 kb on - strand at 1894.851 kb on + strand at 1894.864 kb on + strand at 1894.864 kb on + strand at 1894.877 kb on + strand at 1894.921 kb on + strand at 1894.951 kb on + strand at 1894.951 kb on + strand at 1894.958 kb on + strand at 1894.960 kb on + strand at 1894.960 kb on + strand at 1894.960 kb on + strand at 1894.965 kb on + strand at 1894.966 kb on - strand at 1894.966 kb on - strand at 1894.983 kb on - strand at 1894.998 kb on + strand at 1895.043 kb on + strand at 1895.043 kb on + strand at 1895.043 kb on + strand at 1895.043 kb on + strand at 1895.051 kb on - strand at 1895.051 kb on - strand at 1895.051 kb on - strand at 1895.051 kb on - strand at 1895.051 kb on - strand at 1895.051 kb on - strand at 1895.051 kb on - strand at 1895.051 kb on - strand at 1895.051 kb on - strand at 1895.051 kb on - strand at 1895.052 kb on + strand at 1895.052 kb on + strand at 1895.052 kb on + strand at 1895.052 kb on + strand at 1895.052 kb on + strand at 1895.052 kb on + strand at 1895.060 kb on - strand at 1895.060 kb on - strand at 1895.060 kb on - strand at 1895.060 kb on - strand at 1895.060 kb on - strand at 1895.060 kb on - strand at 1895.060 kb on - strand at 1895.067 kb on - strand at 1895.069 kb on + strand at 1895.069 kb on + strand at 1895.069 kb on + strand at 1895.069 kb on + strand at 1895.069 kb on + strand at 1895.069 kb on + strand at 1895.072 kb on - strand at 1895.072 kb on - strand at 1895.074 kb on + strand at 1895.074 kb on + strand at 1895.074 kb on + strand at 1895.074 kb on + strand at 1895.074 kb on + strand at 1895.075 kb on + strand at 1895.083 kb on - strand at 1895.089 kb on + strand at 1895.089 kb on + strand at 1895.089 kb on + strand at 1895.089 kb on + strand at 1895.089 kb on + strand at 1895.089 kb on + strand at 1895.094 kb on + strand at 1895.097 kb on - strand at 1895.099 kb on + strand at 1895.099 kb on + strand at 1895.099 kb on + strand at 1895.099 kb on + strand at 1895.099 kb on + strand at 1895.099 kb on + strand at 1895.099 kb on + strand at 1895.102 kb on - strand at 1895.102 kb on - strand at 1895.102 kb on - strand at 1895.107 kb on - strand at 1895.107 kb on - strand at 1895.107 kb on - strand at 1895.136 kb on + strand at 1895.183 kb on - strand at 1895.189 kb on + strand at 1895.202 kb on - strand, within Dsui_1795 at 1895.204 kb on - strand, within Dsui_1795 at 1895.206 kb on + strand, within Dsui_1795 at 1895.215 kb on - strand, within Dsui_1795 at 1895.227 kb on + strand, within Dsui_1795 at 1895.245 kb on - strand, within Dsui_1795 at 1895.276 kb on - strand, within Dsui_1795 at 1895.314 kb on - strand, within Dsui_1795 at 1895.365 kb on + strand, within Dsui_1795 at 1895.365 kb on + strand, within Dsui_1795 at 1895.411 kb on + strand, within Dsui_1795 at 1895.468 kb on - strand at 1895.493 kb on + strand at 1895.512 kb on + strand at 1895.545 kb on - strand at 1895.545 kb on - strand at 1895.576 kb on + strand at 1895.605 kb on - strand at 1895.647 kb on - strand at 1895.687 kb on + strand at 1895.695 kb on - strand at 1895.754 kb on + strand, within Dsui_1796 at 1895.762 kb on - strand, within Dsui_1796 at 1895.787 kb on - strand at 1895.812 kb on - strand, within Dsui_1796 at 1895.875 kb on + strand at 1895.897 kb on - strand, within Dsui_1796 at 1895.905 kb on + strand, within Dsui_1796 at 1895.914 kb on - strand, within Dsui_1796 at 1895.914 kb on - strand, within Dsui_1796 at 1895.922 kb on + strand at 1895.922 kb on + strand, within Dsui_1796 at 1895.935 kb on + strand, within Dsui_1796 at 1896.022 kb on - strand, within Dsui_1796 at 1896.037 kb on - strand, within Dsui_1796 at 1896.046 kb on + strand, within Dsui_1796 at 1896.056 kb on + strand at 1896.056 kb on + strand, within Dsui_1796 at 1896.056 kb on + strand, within Dsui_1796 at 1896.064 kb on - strand, within Dsui_1796 at 1896.064 kb on - strand, within Dsui_1796 at 1896.064 kb on - strand, within Dsui_1796 at 1896.064 kb on - strand, within Dsui_1796 at 1896.064 kb on - strand, within Dsui_1796 at 1896.086 kb on - strand, within Dsui_1796 at 1896.099 kb on - strand, within Dsui_1796 at 1896.132 kb on - strand, within Dsui_1796 at 1896.147 kb on + strand, within Dsui_1796 at 1896.147 kb on + strand, within Dsui_1796 at 1896.155 kb on - strand, within Dsui_1796 at 1896.162 kb on - strand, within Dsui_1796 at 1896.164 kb on + strand, within Dsui_1796 at 1896.169 kb on + strand, within Dsui_1796 at 1896.169 kb on + strand, within Dsui_1796 at 1896.177 kb on - strand, within Dsui_1796 at 1896.238 kb on + strand, within Dsui_1796 at 1896.261 kb on + strand, within Dsui_1796 at 1896.262 kb on + strand at 1896.281 kb on + strand, within Dsui_1796 at 1896.336 kb on - strand, within Dsui_1796 at 1896.404 kb on + strand, within Dsui_1796 at 1896.422 kb on - strand, within Dsui_1796 at 1896.423 kb on + strand at 1896.484 kb on - strand at 1896.484 kb on - strand, within Dsui_1796
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,894,168 + +0.1 1,894,176 - -0.4 1,894,179 + +0.4 1,894,179 + -0.4 1,894,179 + -0.9 1,894,179 + +0.4 1,894,179 + -1.5 1,894,186 + -1.0 1,894,187 - +0.1 1,894,187 - -0.7 1,894,187 - +0.1 1,894,187 - -0.4 1,894,187 - +0.7 1,894,191 + -1.4 1,894,196 + +0.5 1,894,199 - -0.1 1,894,219 + +0.2 1,894,219 + +1.4 1,894,219 + -1.8 1,894,227 - +1.5 1,894,227 - +1.7 1,894,246 - -1.0 1,894,246 - -0.4 1,894,248 + -1.8 1,894,248 + -0.2 1,894,248 + +0.4 1,894,248 + -0.3 1,894,248 + -0.1 1,894,248 + -0.2 1,894,256 - Dsui_1794 0.13 +1.4 1,894,256 - Dsui_1794 0.13 +0.2 1,894,256 - Dsui_1794 0.13 +0.7 1,894,256 - Dsui_1794 0.13 -0.5 1,894,257 - Dsui_1794 0.13 +0.3 1,894,262 - Dsui_1794 0.15 -1.0 1,894,272 - Dsui_1794 0.19 +0.4 1,894,300 - Dsui_1794 0.30 +0.0 1,894,320 + Dsui_1794 0.37 -0.3 1,894,342 - Dsui_1794 0.45 -1.1 1,894,351 - Dsui_1794 0.49 +0.3 1,894,374 + Dsui_1794 0.58 +0.3 1,894,375 - Dsui_1794 0.58 -0.5 1,894,399 - Dsui_1794 0.67 -0.2 1,894,402 - Dsui_1794 0.68 +0.5 1,894,404 - Dsui_1794 0.69 +0.2 1,894,405 + Dsui_1794 0.69 -1.4 1,894,405 + Dsui_1794 0.69 +0.3 1,894,417 + Dsui_1794 0.74 -0.1 1,894,417 + Dsui_1794 0.74 +0.7 1,894,421 - Dsui_1794 0.75 +1.0 1,894,421 - Dsui_1794 0.75 +0.7 1,894,423 + Dsui_1794 0.76 -0.2 1,894,431 - Dsui_1794 0.79 +0.1 1,894,435 - Dsui_1794 0.81 -0.2 1,894,435 - Dsui_1794 0.81 +1.3 1,894,435 - Dsui_1794 0.81 +0.2 1,894,436 + Dsui_1794 0.81 +0.3 1,894,446 + Dsui_1794 0.85 +0.5 1,894,446 + Dsui_1794 0.85 +1.0 1,894,454 - Dsui_1794 0.88 +0.3 1,894,454 - Dsui_1794 0.88 -0.3 1,894,454 - Dsui_1794 0.88 -1.0 1,894,454 - Dsui_1794 0.88 -0.3 1,894,454 - Dsui_1794 0.88 +1.2 1,894,454 - Dsui_1794 0.88 -1.0 1,894,454 - Dsui_1794 0.88 +0.2 1,894,468 - +0.6 1,894,485 - +0.1 1,894,500 - +0.9 1,894,507 + +0.4 1,894,509 - -0.4 1,894,523 + +0.7 1,894,525 + -0.6 1,894,525 + +0.1 1,894,533 - -0.1 1,894,533 - +0.3 1,894,563 + -2.7 1,894,567 + -0.6 1,894,588 + +0.9 1,894,596 - +0.1 1,894,596 - +0.6 1,894,618 + -0.0 1,894,644 + +0.2 1,894,652 - -0.2 1,894,680 + +0.8 1,894,680 + -0.5 1,894,680 + +0.0 1,894,680 + +2.8 1,894,680 + -0.4 1,894,680 + +0.3 1,894,680 + -0.1 1,894,680 + -0.3 1,894,680 + +0.0 1,894,788 + -2.0 1,894,788 - -0.6 1,894,851 + +0.7 1,894,864 + +1.9 1,894,864 + +0.4 1,894,877 + -1.6 1,894,921 + -0.1 1,894,951 + -0.2 1,894,951 + -3.2 1,894,958 + -2.2 1,894,960 + -0.1 1,894,960 + -0.3 1,894,960 + -0.4 1,894,965 + -0.3 1,894,966 - -2.2 1,894,966 - -1.6 1,894,983 - -2.0 1,894,998 + -0.4 1,895,043 + +0.3 1,895,043 + +1.9 1,895,043 + -2.7 1,895,043 + -2.0 1,895,051 - -2.0 1,895,051 - -1.1 1,895,051 - -0.2 1,895,051 - +0.2 1,895,051 - -0.1 1,895,051 - +0.7 1,895,051 - -0.4 1,895,051 - -0.4 1,895,051 - -0.7 1,895,051 - +0.2 1,895,052 + +0.9 1,895,052 + +1.7 1,895,052 + -3.4 1,895,052 + -2.3 1,895,052 + -0.4 1,895,052 + +0.4 1,895,060 - -3.7 1,895,060 - -2.9 1,895,060 - -2.6 1,895,060 - -3.6 1,895,060 - -3.6 1,895,060 - -1.1 1,895,060 - -0.3 1,895,067 - -3.0 1,895,069 + +0.0 1,895,069 + -1.4 1,895,069 + -3.5 1,895,069 + -0.9 1,895,069 + -0.4 1,895,069 + +0.6 1,895,072 - -2.8 1,895,072 - -2.0 1,895,074 + -2.6 1,895,074 + -0.5 1,895,074 + -2.8 1,895,074 + -0.5 1,895,074 + -1.6 1,895,075 + -1.6 1,895,083 - -1.6 1,895,089 + -2.0 1,895,089 + -2.3 1,895,089 + -1.8 1,895,089 + -1.5 1,895,089 + -3.0 1,895,089 + +0.1 1,895,094 + -1.3 1,895,097 - -2.4 1,895,099 + +0.4 1,895,099 + -1.0 1,895,099 + -2.2 1,895,099 + +1.2 1,895,099 + +1.1 1,895,099 + -2.2 1,895,099 + -1.1 1,895,102 - -3.2 1,895,102 - -3.6 1,895,102 - -1.6 1,895,107 - -3.5 1,895,107 - -4.5 1,895,107 - -0.1 1,895,136 + -2.6 1,895,183 - -1.3 1,895,189 + +1.2 1,895,202 - Dsui_1795 0.12 -3.0 1,895,204 - Dsui_1795 0.12 -3.4 1,895,206 + Dsui_1795 0.13 +0.0 1,895,215 - Dsui_1795 0.15 -1.6 1,895,227 + Dsui_1795 0.19 -1.0 1,895,245 - Dsui_1795 0.24 -3.2 1,895,276 - Dsui_1795 0.33 -3.3 1,895,314 - Dsui_1795 0.45 -0.5 1,895,365 + Dsui_1795 0.60 -0.7 1,895,365 + Dsui_1795 0.60 -0.4 1,895,411 + Dsui_1795 0.73 -1.2 1,895,468 - -2.8 1,895,493 + -0.4 1,895,512 + -0.7 1,895,545 - -1.0 1,895,545 - -2.6 1,895,576 + -0.0 1,895,605 - -0.3 1,895,647 - -0.7 1,895,687 + -2.6 1,895,695 - -3.0 1,895,754 + Dsui_1796 0.11 -3.0 1,895,762 - Dsui_1796 0.12 -1.0 1,895,787 - -1.2 1,895,812 - Dsui_1796 0.17 +0.3 1,895,875 + -3.1 1,895,897 - Dsui_1796 0.26 -1.2 1,895,905 + Dsui_1796 0.27 -2.6 1,895,914 - Dsui_1796 0.28 -2.6 1,895,914 - Dsui_1796 0.28 -2.8 1,895,922 + -2.0 1,895,922 + Dsui_1796 0.28 -2.9 1,895,935 + Dsui_1796 0.30 -1.9 1,896,022 - Dsui_1796 0.39 +0.1 1,896,037 - Dsui_1796 0.40 -2.8 1,896,046 + Dsui_1796 0.41 -1.6 1,896,056 + -3.0 1,896,056 + Dsui_1796 0.42 -3.3 1,896,056 + Dsui_1796 0.42 -2.5 1,896,064 - Dsui_1796 0.43 -2.8 1,896,064 - Dsui_1796 0.43 -2.6 1,896,064 - Dsui_1796 0.43 -1.5 1,896,064 - Dsui_1796 0.43 -0.6 1,896,064 - Dsui_1796 0.43 -1.3 1,896,086 - Dsui_1796 0.45 -3.7 1,896,099 - Dsui_1796 0.47 +0.1 1,896,132 - Dsui_1796 0.50 -1.4 1,896,147 + Dsui_1796 0.52 +0.1 1,896,147 + Dsui_1796 0.52 +0.0 1,896,155 - Dsui_1796 0.53 -1.6 1,896,162 - Dsui_1796 0.53 +2.8 1,896,164 + Dsui_1796 0.53 -2.6 1,896,169 + Dsui_1796 0.54 -1.9 1,896,169 + Dsui_1796 0.54 -2.7 1,896,177 - Dsui_1796 0.55 +0.3 1,896,238 + Dsui_1796 0.61 -0.6 1,896,261 + Dsui_1796 0.63 -2.7 1,896,262 + +2.3 1,896,281 + Dsui_1796 0.66 -2.6 1,896,336 - Dsui_1796 0.71 -3.1 1,896,404 + Dsui_1796 0.78 -1.8 1,896,422 - Dsui_1796 0.80 -3.2 1,896,423 + -2.0 1,896,484 - -2.9 1,896,484 - Dsui_1796 0.86 +0.3
Or see this region's nucleotide sequence