Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1207 and Dsui_1208 are separated by 134 nucleotides Dsui_1208 and Dsui_1209 are separated by 17 nucleotides Dsui_1209 and Dsui_1210 are separated by 80 nucleotides
Dsui_1207: Dsui_1207 - putative calcium-binding protein, at 1,258,271 to 1,265,536
_1207
Dsui_1208: Dsui_1208 - tRNA-Met, at 1,265,671 to 1,265,747
_1208
Dsui_1209: Dsui_1209 - RNA polymerase sigma factor, sigma-70 family, at 1,265,765 to 1,267,735
_1209
Dsui_1210: Dsui_1210 - DNA primase, catalytic core, at 1,267,816 to 1,269,570
_1210
Position (kb)
1265
1266
1267
1268 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1264.773 kb on - strand, within Dsui_1207 at 1264.773 kb on - strand, within Dsui_1207 at 1264.773 kb on - strand, within Dsui_1207 at 1264.773 kb on - strand, within Dsui_1207 at 1264.793 kb on + strand, within Dsui_1207 at 1264.800 kb on + strand at 1264.837 kb on + strand at 1264.902 kb on + strand at 1264.902 kb on + strand at 1264.904 kb on + strand at 1264.954 kb on + strand at 1264.955 kb on + strand at 1264.977 kb on - strand at 1264.984 kb on + strand at 1264.994 kb on + strand at 1265.002 kb on - strand at 1265.005 kb on + strand at 1265.046 kb on - strand at 1265.046 kb on - strand at 1265.050 kb on + strand at 1265.090 kb on + strand at 1265.110 kb on + strand at 1265.117 kb on + strand at 1265.118 kb on - strand at 1265.118 kb on - strand at 1265.118 kb on - strand at 1265.141 kb on + strand at 1265.146 kb on + strand at 1265.184 kb on - strand at 1265.193 kb on + strand at 1265.203 kb on + strand at 1265.246 kb on + strand at 1265.248 kb on + strand at 1265.262 kb on - strand at 1265.273 kb on - strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.325 kb on - strand at 1265.398 kb on - strand at 1265.433 kb on + strand at 1265.437 kb on + strand at 1265.437 kb on + strand at 1265.437 kb on + strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.488 kb on - strand at 1265.499 kb on - strand at 1265.507 kb on - strand at 1265.529 kb on - strand at 1265.559 kb on + strand at 1265.559 kb on + strand at 1265.559 kb on + strand at 1265.562 kb on + strand at 1265.567 kb on - strand at 1265.620 kb on - strand at 1265.743 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,264,773 - Dsui_1207 0.89 +0.1 1,264,773 - Dsui_1207 0.89 +0.7 1,264,773 - Dsui_1207 0.89 +1.4 1,264,773 - Dsui_1207 0.89 -1.1 1,264,793 + Dsui_1207 0.90 +0.4 1,264,800 + -1.8 1,264,837 + +0.2 1,264,902 + +1.5 1,264,902 + +1.7 1,264,904 + +0.3 1,264,954 + -0.8 1,264,955 + +1.4 1,264,977 - +0.8 1,264,984 + +0.9 1,264,994 + +1.3 1,265,002 - +0.4 1,265,005 + +1.0 1,265,046 - +1.0 1,265,046 - +0.6 1,265,050 + -0.2 1,265,090 + +0.6 1,265,110 + +0.0 1,265,117 + +1.8 1,265,118 - +1.0 1,265,118 - -0.9 1,265,118 - -0.5 1,265,141 + +0.4 1,265,146 + +0.9 1,265,184 - +1.1 1,265,193 + +0.6 1,265,203 + -0.6 1,265,246 + +1.0 1,265,248 + +0.6 1,265,262 - +0.6 1,265,273 - +1.0 1,265,302 + -1.5 1,265,302 + +0.2 1,265,302 + -0.6 1,265,302 + +0.6 1,265,302 + +0.7 1,265,302 + -0.4 1,265,325 - +0.6 1,265,398 - -0.0 1,265,433 + -0.0 1,265,437 + +2.1 1,265,437 + +0.2 1,265,437 + +0.8 1,265,445 - -0.9 1,265,445 - +0.8 1,265,445 - +0.1 1,265,445 - +0.7 1,265,445 - +1.9 1,265,445 - +1.5 1,265,488 - -0.7 1,265,499 - +0.6 1,265,507 - +0.4 1,265,529 - +1.5 1,265,559 + +0.3 1,265,559 + +0.3 1,265,559 + +0.2 1,265,562 + +0.1 1,265,567 - +1.0 1,265,620 - +0.2 1,265,743 + -0.8
Or see this region's nucleotide sequence