Strain Fitness in Dechlorosoma suillum PS around Dsui_0847

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0846 and Dsui_0847 overlap by 4 nucleotidesDsui_0847 and Dsui_0848 are separated by 4 nucleotidesDsui_0848 and Dsui_0849 overlap by 4 nucleotides Dsui_0846: Dsui_0846 - glucose-inhibited division protein A, at 863,268 to 865,142 _0846 Dsui_0847: Dsui_0847 - 16S rRNA (guanine(527)-N(7))-methyltransferase GidB, at 865,139 to 865,780 _0847 Dsui_0848: Dsui_0848 - ATPase involved in chromosome partitioning, at 865,785 to 866,567 _0848 Dsui_0849: Dsui_0849 - ParB-like partition protein, at 866,564 to 867,397 _0849 Position (kb) 865 866Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 864.268 kb on + strand, within Dsui_0846at 864.385 kb on - strandat 864.455 kb on + strand, within Dsui_0846at 864.523 kb on + strand, within Dsui_0846at 864.704 kb on + strand, within Dsui_0846at 864.725 kb on + strand, within Dsui_0846at 864.801 kb on + strand, within Dsui_0846at 864.816 kb on + strand, within Dsui_0846at 864.944 kb on + strand, within Dsui_0846at 865.143 kb on - strandat 865.186 kb on + strandat 865.196 kb on + strandat 865.196 kb on + strandat 865.216 kb on + strand, within Dsui_0847at 865.216 kb on + strand, within Dsui_0847at 865.216 kb on + strand, within Dsui_0847at 865.216 kb on + strand, within Dsui_0847at 865.224 kb on - strand, within Dsui_0847at 865.233 kb on + strand, within Dsui_0847at 865.275 kb on - strand, within Dsui_0847at 865.282 kb on + strand, within Dsui_0847at 865.291 kb on + strand, within Dsui_0847at 865.299 kb on - strand, within Dsui_0847at 865.299 kb on - strand, within Dsui_0847at 865.313 kb on - strand, within Dsui_0847at 865.565 kb on + strand, within Dsui_0847at 865.608 kb on + strand, within Dsui_0847at 865.608 kb on + strand, within Dsui_0847at 865.712 kb on + strand, within Dsui_0847at 865.712 kb on + strand, within Dsui_0847at 865.775 kb on + strandat 865.790 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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864,268 + Dsui_0846 0.53 -4.0
864,385 - -2.0
864,455 + Dsui_0846 0.63 -2.2
864,523 + Dsui_0846 0.67 -2.1
864,704 + Dsui_0846 0.77 -2.9
864,725 + Dsui_0846 0.78 -3.2
864,801 + Dsui_0846 0.82 -4.0
864,816 + Dsui_0846 0.83 -3.5
864,944 + Dsui_0846 0.89 -1.0
865,143 - -1.4
865,186 + +1.5
865,196 + +1.4
865,196 + +1.4
865,216 + Dsui_0847 0.12 +0.9
865,216 + Dsui_0847 0.12 +0.4
865,216 + Dsui_0847 0.12 +0.7
865,216 + Dsui_0847 0.12 +0.1
865,224 - Dsui_0847 0.13 -0.4
865,233 + Dsui_0847 0.15 +0.3
865,275 - Dsui_0847 0.21 -1.3
865,282 + Dsui_0847 0.22 +1.6
865,291 + Dsui_0847 0.24 +0.4
865,299 - Dsui_0847 0.25 -0.5
865,299 - Dsui_0847 0.25 -1.1
865,313 - Dsui_0847 0.27 -1.3
865,565 + Dsui_0847 0.66 -0.7
865,608 + Dsui_0847 0.73 +1.2
865,608 + Dsui_0847 0.73 +0.3
865,712 + Dsui_0847 0.89 -0.7
865,712 + Dsui_0847 0.89 +0.3
865,775 + -1.0
865,790 + +0.0

Or see this region's nucleotide sequence