Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0599 and Dsui_0600 are separated by 42 nucleotides Dsui_0600 and Dsui_0601 overlap by 1 nucleotides Dsui_0601 and Dsui_0602 are separated by 39 nucleotides Dsui_0602 and Dsui_0603 are separated by 13 nucleotides
Dsui_0599: Dsui_0599 - response regulator of the LytR/AlgR family, at 595,631 to 596,344
_0599
Dsui_0600: Dsui_0600 - TIGR00251 family protein, at 596,387 to 596,677
_0600
Dsui_0601: Dsui_0601 - putative integral membrane protein, at 596,677 to 597,249
_0601
Dsui_0602: Dsui_0602 - pyrroline-5-carboxylate reductase, at 597,289 to 598,101
_0602
Dsui_0603: Dsui_0603 - pyridoxal phosphate enzyme, YggS family, at 598,115 to 598,819
_0603
Position (kb) 596
597
598 Strain fitness (log2 ratio) -2
-1
0
1
2 at 595.751 kb on + strand, within Dsui_0599 at 595.795 kb on - strand at 595.928 kb on + strand, within Dsui_0599 at 596.051 kb on + strand, within Dsui_0599 at 596.069 kb on + strand, within Dsui_0599 at 596.088 kb on - strand, within Dsui_0599 at 596.105 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.107 kb on + strand, within Dsui_0599 at 596.115 kb on - strand, within Dsui_0599 at 596.115 kb on - strand, within Dsui_0599 at 596.115 kb on - strand, within Dsui_0599 at 596.115 kb on - strand, within Dsui_0599 at 596.115 kb on - strand, within Dsui_0599 at 596.115 kb on - strand, within Dsui_0599 at 596.115 kb on - strand, within Dsui_0599 at 596.138 kb on + strand, within Dsui_0599 at 596.206 kb on + strand, within Dsui_0599 at 596.214 kb on - strand, within Dsui_0599 at 596.348 kb on - strand at 596.540 kb on - strand, within Dsui_0600 at 596.595 kb on + strand, within Dsui_0600 at 596.710 kb on - strand at 596.812 kb on - strand, within Dsui_0601 at 597.140 kb on - strand, within Dsui_0601 at 597.274 kb on - strand at 597.280 kb on - strand at 597.310 kb on + strand at 598.160 kb on - strand at 598.176 kb on + strand at 598.200 kb on + strand, within Dsui_0603 at 598.212 kb on + strand, within Dsui_0603
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 595,751 + Dsui_0599 0.17 -0.2 595,795 - -1.2 595,928 + Dsui_0599 0.42 -0.9 596,051 + Dsui_0599 0.59 +0.3 596,069 + Dsui_0599 0.61 +0.6 596,088 - Dsui_0599 0.64 +0.9 596,105 + Dsui_0599 0.66 -0.0 596,107 + Dsui_0599 0.67 +0.4 596,107 + Dsui_0599 0.67 +0.8 596,107 + Dsui_0599 0.67 +0.6 596,107 + Dsui_0599 0.67 -0.0 596,107 + Dsui_0599 0.67 +2.4 596,107 + Dsui_0599 0.67 +0.1 596,107 + Dsui_0599 0.67 +0.1 596,107 + Dsui_0599 0.67 +1.3 596,115 - Dsui_0599 0.68 -0.3 596,115 - Dsui_0599 0.68 -0.1 596,115 - Dsui_0599 0.68 +0.8 596,115 - Dsui_0599 0.68 +0.3 596,115 - Dsui_0599 0.68 +0.1 596,115 - Dsui_0599 0.68 +0.4 596,115 - Dsui_0599 0.68 -1.8 596,138 + Dsui_0599 0.71 +0.5 596,206 + Dsui_0599 0.81 +0.5 596,214 - Dsui_0599 0.82 +0.8 596,348 - +0.9 596,540 - Dsui_0600 0.53 +0.2 596,595 + Dsui_0600 0.71 +0.0 596,710 - +1.0 596,812 - Dsui_0601 0.24 +1.8 597,140 - Dsui_0601 0.81 +1.0 597,274 - +1.4 597,280 - +2.5 597,310 + -2.7 598,160 - +1.0 598,176 + +0.3 598,200 + Dsui_0603 0.12 +0.0 598,212 + Dsui_0603 0.14 +0.6
Or see this region's nucleotide sequence