Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_864 and Ac3H11_865 overlap by 1 nucleotides Ac3H11_865 and Ac3H11_866 are separated by 6 nucleotides Ac3H11_866 and Ac3H11_867 overlap by 4 nucleotides Ac3H11_867 and Ac3H11_868 are separated by 105 nucleotides
Ac3H11_864 - Phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4); Outer membrane phospholipase A, at 145,912 to 147,126
_864
Ac3H11_865 - hypothetical protein, at 147,126 to 147,677
_865
Ac3H11_866 - ATP-dependent DNA helicase Rep, at 147,684 to 149,663
_866
Ac3H11_867 - hypothetical protein, at 149,660 to 150,061
_867
Ac3H11_868 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 150,167 to 151,366
_868
Position (kb) 147
148
149
150 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 146.694 kb on + strand, within Ac3H11_864 at 146.695 kb on - strand, within Ac3H11_864 at 146.757 kb on - strand, within Ac3H11_864 at 146.757 kb on - strand, within Ac3H11_864 at 146.848 kb on - strand, within Ac3H11_864 at 147.213 kb on + strand, within Ac3H11_865 at 147.214 kb on - strand, within Ac3H11_865 at 147.559 kb on + strand, within Ac3H11_865 at 147.677 kb on + strand at 147.677 kb on + strand at 147.677 kb on + strand at 147.677 kb on + strand at 147.678 kb on - strand at 147.678 kb on - strand at 147.678 kb on - strand at 149.862 kb on + strand, within Ac3H11_867 at 150.011 kb on + strand, within Ac3H11_867 at 150.575 kb on + strand, within Ac3H11_868 at 150.576 kb on - strand, within Ac3H11_868 at 150.576 kb on - strand, within Ac3H11_868 at 150.576 kb on - strand, within Ac3H11_868 at 150.576 kb on - strand, within Ac3H11_868 at 150.576 kb on - strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.593 kb on + strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 146,694 + Ac3H11_864 0.64 +1.2 146,695 - Ac3H11_864 0.64 -1.2 146,757 - Ac3H11_864 0.70 -1.7 146,757 - Ac3H11_864 0.70 +1.1 146,848 - Ac3H11_864 0.77 +2.0 147,213 + Ac3H11_865 0.16 -2.2 147,214 - Ac3H11_865 0.16 +1.2 147,559 + Ac3H11_865 0.78 -0.6 147,677 + -2.5 147,677 + +1.6 147,677 + +0.6 147,677 + +1.1 147,678 - -3.0 147,678 - -1.9 147,678 - +1.5 149,862 + Ac3H11_867 0.50 +3.0 150,011 + Ac3H11_867 0.87 +0.7 150,575 + Ac3H11_868 0.34 -3.2 150,576 - Ac3H11_868 0.34 -1.2 150,576 - Ac3H11_868 0.34 +0.0 150,576 - Ac3H11_868 0.34 -3.1 150,576 - Ac3H11_868 0.34 +0.9 150,576 - Ac3H11_868 0.34 -1.7 150,593 + Ac3H11_868 0.35 +0.5 150,593 + Ac3H11_868 0.35 -3.4 150,593 + Ac3H11_868 0.35 -0.1 150,593 + Ac3H11_868 0.35 +1.1 150,593 + Ac3H11_868 0.35 -2.3 150,593 + Ac3H11_868 0.35 +0.7 150,593 + Ac3H11_868 0.35 +1.4 150,593 + Ac3H11_868 0.35 +1.0 150,593 + Ac3H11_868 0.35 +3.3 150,593 + Ac3H11_868 0.35 +0.7 150,593 + Ac3H11_868 0.35 -2.4 150,593 + Ac3H11_868 0.35 +1.2 150,593 + Ac3H11_868 0.35 +1.6 150,593 + Ac3H11_868 0.35 +1.6 150,593 + Ac3H11_868 0.35 -1.2 150,593 + Ac3H11_868 0.35 -2.4 150,593 + Ac3H11_868 0.35 -0.2 150,594 - Ac3H11_868 0.36 +1.9 150,594 - Ac3H11_868 0.36 +1.3 150,594 - Ac3H11_868 0.36 +1.8 150,594 - Ac3H11_868 0.36 +2.8 150,594 - Ac3H11_868 0.36 +0.4 150,594 - Ac3H11_868 0.36 +0.2 150,594 - Ac3H11_868 0.36 -2.0 150,594 - Ac3H11_868 0.36 +0.0 150,594 - Ac3H11_868 0.36 -1.7 150,594 - Ac3H11_868 0.36 +0.4 150,594 - Ac3H11_868 0.36 +1.6
Or see this region's nucleotide sequence