Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4433 and Ac3H11_4434 are separated by 74 nucleotides Ac3H11_4434 and Ac3H11_4435 are separated by 31 nucleotides Ac3H11_4435 and Ac3H11_4436 are separated by 214 nucleotides
Ac3H11_4433 - Exodeoxyribonuclease III (EC 3.1.11.2), at 11,308 to 12,084
_4433
Ac3H11_4434 - Dihydrofolate reductase (EC 1.5.1.3), at 12,159 to 12,647
_4434
Ac3H11_4435 - Probable transmembrane protein, at 12,679 to 13,176
_4435
Ac3H11_4436 - Thymidylate synthase (EC 2.1.1.45), at 13,391 to 14,272
_4436
Position (kb) 12
13 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 11.244 kb on + strand at 11.276 kb on - strand at 11.279 kb on - strand at 11.286 kb on + strand at 11.286 kb on + strand at 11.720 kb on + strand, within Ac3H11_4433 at 11.720 kb on + strand, within Ac3H11_4433 at 11.762 kb on + strand, within Ac3H11_4433 at 11.762 kb on + strand, within Ac3H11_4433 at 12.134 kb on + strand at 12.734 kb on + strand, within Ac3H11_4435 at 12.734 kb on + strand, within Ac3H11_4435 at 12.734 kb on + strand, within Ac3H11_4435 at 12.734 kb on + strand, within Ac3H11_4435 at 12.734 kb on + strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.735 kb on - strand, within Ac3H11_4435 at 12.744 kb on - strand, within Ac3H11_4435 at 12.950 kb on + strand, within Ac3H11_4435 at 12.951 kb on - strand, within Ac3H11_4435 at 12.951 kb on - strand, within Ac3H11_4435 at 12.951 kb on - strand, within Ac3H11_4435 at 12.951 kb on - strand, within Ac3H11_4435 at 12.951 kb on - strand, within Ac3H11_4435 at 12.951 kb on - strand, within Ac3H11_4435 at 13.032 kb on - strand, within Ac3H11_4435 at 13.032 kb on - strand, within Ac3H11_4435 at 13.032 kb on - strand, within Ac3H11_4435 at 13.032 kb on - strand, within Ac3H11_4435 at 13.032 kb on - strand, within Ac3H11_4435 at 13.119 kb on - strand, within Ac3H11_4435 at 13.119 kb on - strand, within Ac3H11_4435 at 13.270 kb on + strand at 13.271 kb on - strand at 13.271 kb on - strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.297 kb on + strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.298 kb on - strand at 13.392 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 11,244 + +0.6 11,276 - -3.0 11,279 - +0.8 11,286 + +0.3 11,286 + +0.2 11,720 + Ac3H11_4433 0.53 +0.1 11,720 + Ac3H11_4433 0.53 +2.7 11,762 + Ac3H11_4433 0.58 -1.1 11,762 + Ac3H11_4433 0.58 +0.6 12,134 + -0.1 12,734 + Ac3H11_4435 0.11 -1.3 12,734 + Ac3H11_4435 0.11 -2.4 12,734 + Ac3H11_4435 0.11 -0.1 12,734 + Ac3H11_4435 0.11 -1.1 12,734 + Ac3H11_4435 0.11 +0.7 12,735 - Ac3H11_4435 0.11 +0.4 12,735 - Ac3H11_4435 0.11 -3.2 12,735 - Ac3H11_4435 0.11 -0.6 12,735 - Ac3H11_4435 0.11 -2.5 12,735 - Ac3H11_4435 0.11 -1.2 12,735 - Ac3H11_4435 0.11 +0.1 12,735 - Ac3H11_4435 0.11 -1.5 12,735 - Ac3H11_4435 0.11 -2.6 12,735 - Ac3H11_4435 0.11 +0.8 12,735 - Ac3H11_4435 0.11 +1.6 12,735 - Ac3H11_4435 0.11 -0.1 12,735 - Ac3H11_4435 0.11 -2.2 12,744 - Ac3H11_4435 0.13 -2.9 12,950 + Ac3H11_4435 0.54 -0.6 12,951 - Ac3H11_4435 0.55 +1.2 12,951 - Ac3H11_4435 0.55 +0.7 12,951 - Ac3H11_4435 0.55 +0.1 12,951 - Ac3H11_4435 0.55 +1.4 12,951 - Ac3H11_4435 0.55 +0.6 12,951 - Ac3H11_4435 0.55 -1.0 13,032 - Ac3H11_4435 0.71 +0.7 13,032 - Ac3H11_4435 0.71 +0.8 13,032 - Ac3H11_4435 0.71 -1.2 13,032 - Ac3H11_4435 0.71 -0.3 13,032 - Ac3H11_4435 0.71 -3.1 13,119 - Ac3H11_4435 0.88 -0.2 13,119 - Ac3H11_4435 0.88 +0.2 13,270 + -2.7 13,271 - +2.9 13,271 - +2.5 13,297 + +2.0 13,297 + +1.2 13,297 + -0.8 13,297 + -1.8 13,297 + +0.1 13,297 + -0.9 13,297 + -2.8 13,297 + +1.0 13,297 + -2.9 13,297 + -1.6 13,297 + -2.1 13,297 + -1.0 13,297 + +0.8 13,297 + +1.5 13,297 + -2.6 13,298 - +1.6 13,298 - +1.0 13,298 - -0.5 13,298 - -2.3 13,298 - +2.5 13,298 - -1.2 13,298 - +2.6 13,298 - +2.1 13,298 - +0.2 13,298 - +1.9 13,298 - +0.2 13,392 + -2.6
Or see this region's nucleotide sequence