Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4208 and Ac3H11_4209 are separated by 272 nucleotides Ac3H11_4209 and Ac3H11_4210 are separated by 392 nucleotides
Ac3H11_4208 - Putative type II restriction enzyme NmeDIP (EC 3.1.21.4) (Endonuclease NmeDIP) (R.NmeDIP), at 477,260 to 478,243
_4208
Ac3H11_4209 - Heavy metal sensor histidine kinase, at 478,516 to 479,532
_4209
Ac3H11_4210 - DNA-binding heavy metal response regulator, at 479,925 to 480,605
_4210
Position (kb) 478
479
480 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 477.883 kb on - strand, within Ac3H11_4208 at 477.993 kb on + strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 478.081 kb on + strand, within Ac3H11_4208 at 478.082 kb on - strand, within Ac3H11_4208 at 478.082 kb on - strand, within Ac3H11_4208 at 478.082 kb on - strand, within Ac3H11_4208 at 478.095 kb on + strand, within Ac3H11_4208 at 478.095 kb on + strand, within Ac3H11_4208 at 478.095 kb on + strand, within Ac3H11_4208 at 478.096 kb on - strand, within Ac3H11_4208 at 478.096 kb on - strand, within Ac3H11_4208 at 478.096 kb on - strand, within Ac3H11_4208 at 478.145 kb on + strand at 478.145 kb on + strand at 478.146 kb on - strand at 478.147 kb on + strand at 478.147 kb on + strand at 478.148 kb on - strand at 478.148 kb on - strand at 478.148 kb on - strand at 478.148 kb on - strand at 478.243 kb on + strand at 478.243 kb on + strand at 478.243 kb on + strand at 478.244 kb on - strand at 478.244 kb on - strand at 478.244 kb on - strand at 478.244 kb on - strand at 478.244 kb on - strand at 478.247 kb on + strand at 478.248 kb on - strand at 478.275 kb on + strand at 478.276 kb on - strand at 478.302 kb on + strand at 478.303 kb on - strand at 478.303 kb on - strand at 478.303 kb on - strand at 478.329 kb on + strand at 478.329 kb on + strand at 478.329 kb on + strand at 478.330 kb on - strand at 478.330 kb on - strand at 478.330 kb on - strand at 478.330 kb on - strand at 478.330 kb on - strand at 478.385 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.466 kb on - strand at 478.466 kb on - strand at 478.466 kb on - strand at 478.466 kb on - strand at 478.469 kb on + strand at 478.469 kb on + strand at 478.470 kb on - strand at 478.543 kb on + strand at 478.543 kb on + strand at 478.565 kb on + strand at 478.565 kb on + strand at 478.566 kb on - strand at 478.566 kb on - strand at 478.566 kb on - strand at 478.642 kb on - strand, within Ac3H11_4209 at 478.829 kb on + strand, within Ac3H11_4209 at 478.830 kb on - strand, within Ac3H11_4209 at 478.830 kb on - strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 479.072 kb on + strand, within Ac3H11_4209 at 479.072 kb on + strand, within Ac3H11_4209 at 479.115 kb on + strand, within Ac3H11_4209 at 479.115 kb on + strand, within Ac3H11_4209 at 479.355 kb on + strand, within Ac3H11_4209 at 479.355 kb on + strand, within Ac3H11_4209 at 479.355 kb on + strand, within Ac3H11_4209 at 479.356 kb on - strand, within Ac3H11_4209 at 479.356 kb on - strand, within Ac3H11_4209 at 479.356 kb on - strand, within Ac3H11_4209 at 479.356 kb on - strand, within Ac3H11_4209 at 479.426 kb on + strand, within Ac3H11_4209 at 479.426 kb on + strand, within Ac3H11_4209 at 479.426 kb on + strand, within Ac3H11_4209 at 479.426 kb on + strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.453 kb on + strand at 479.453 kb on + strand at 479.454 kb on - strand at 479.454 kb on - strand at 479.454 kb on - strand at 479.489 kb on - strand at 479.553 kb on - strand at 479.648 kb on + strand at 479.648 kb on + strand at 479.648 kb on + strand at 479.648 kb on + strand at 479.807 kb on - strand at 479.807 kb on - strand at 479.926 kb on + strand at 479.926 kb on + strand at 479.926 kb on + strand at 479.926 kb on + strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.950 kb on + strand at 479.950 kb on + strand at 479.951 kb on - strand at 479.951 kb on - strand at 479.951 kb on - strand at 479.990 kb on - strand at 480.070 kb on - strand, within Ac3H11_4210 at 480.070 kb on - strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.314 kb on - strand, within Ac3H11_4210
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 477,883 - Ac3H11_4208 0.63 -3.0 477,993 + Ac3H11_4208 0.74 -0.5 477,994 - Ac3H11_4208 0.75 +1.3 477,994 - Ac3H11_4208 0.75 +0.2 477,994 - Ac3H11_4208 0.75 -3.1 477,994 - Ac3H11_4208 0.75 -1.3 477,994 - Ac3H11_4208 0.75 +0.8 478,081 + Ac3H11_4208 0.83 +2.0 478,082 - Ac3H11_4208 0.84 -0.3 478,082 - Ac3H11_4208 0.84 +2.1 478,082 - Ac3H11_4208 0.84 -1.1 478,095 + Ac3H11_4208 0.85 -0.9 478,095 + Ac3H11_4208 0.85 +2.4 478,095 + Ac3H11_4208 0.85 +0.2 478,096 - Ac3H11_4208 0.85 -0.8 478,096 - Ac3H11_4208 0.85 +2.2 478,096 - Ac3H11_4208 0.85 -0.7 478,145 + -1.3 478,145 + -1.8 478,146 - -0.6 478,147 + -2.7 478,147 + -3.3 478,148 - +1.2 478,148 - +1.5 478,148 - -2.8 478,148 - -1.6 478,243 + -1.8 478,243 + -1.8 478,243 + +1.6 478,244 - +1.4 478,244 - -1.3 478,244 - +1.9 478,244 - -2.2 478,244 - -2.7 478,247 + -0.0 478,248 - +1.8 478,275 + +0.7 478,276 - -3.2 478,302 + -2.2 478,303 - +0.9 478,303 - +0.6 478,303 - +0.3 478,329 + -0.0 478,329 + +0.6 478,329 + -0.2 478,330 - +1.0 478,330 - -1.0 478,330 - -1.9 478,330 - -1.8 478,330 - -0.1 478,385 + -2.9 478,465 + -0.1 478,465 + -1.6 478,465 + +0.3 478,465 + -1.9 478,465 + -3.1 478,465 + -2.9 478,465 + -0.5 478,465 + +0.0 478,465 + +0.3 478,466 - -2.8 478,466 - -0.4 478,466 - -0.4 478,466 - -0.3 478,469 + -1.0 478,469 + -0.0 478,470 - -3.0 478,543 + -3.0 478,543 + -3.4 478,565 + -0.3 478,565 + +0.1 478,566 - +1.8 478,566 - +0.8 478,566 - -3.5 478,642 - Ac3H11_4209 0.12 -3.0 478,829 + Ac3H11_4209 0.31 -1.5 478,830 - Ac3H11_4209 0.31 -2.4 478,830 - Ac3H11_4209 0.31 -2.8 478,949 + Ac3H11_4209 0.43 +1.6 478,949 + Ac3H11_4209 0.43 -3.9 478,949 + Ac3H11_4209 0.43 +1.5 478,949 + Ac3H11_4209 0.43 +2.7 478,949 + Ac3H11_4209 0.43 -2.3 478,949 + Ac3H11_4209 0.43 +0.8 478,950 - Ac3H11_4209 0.43 -2.4 478,950 - Ac3H11_4209 0.43 -2.7 478,950 - Ac3H11_4209 0.43 +1.0 478,950 - Ac3H11_4209 0.43 -0.0 478,950 - Ac3H11_4209 0.43 +1.8 479,072 + Ac3H11_4209 0.55 +1.1 479,072 + Ac3H11_4209 0.55 +1.7 479,115 + Ac3H11_4209 0.59 +0.2 479,115 + Ac3H11_4209 0.59 -0.0 479,355 + Ac3H11_4209 0.82 +2.8 479,355 + Ac3H11_4209 0.82 +1.5 479,355 + Ac3H11_4209 0.82 -0.3 479,356 - Ac3H11_4209 0.83 +1.1 479,356 - Ac3H11_4209 0.83 +0.5 479,356 - Ac3H11_4209 0.83 +0.9 479,356 - Ac3H11_4209 0.83 -0.1 479,426 + Ac3H11_4209 0.89 -1.6 479,426 + Ac3H11_4209 0.89 -3.3 479,426 + Ac3H11_4209 0.89 -3.8 479,426 + Ac3H11_4209 0.89 -2.0 479,427 - Ac3H11_4209 0.90 -3.0 479,427 - Ac3H11_4209 0.90 +0.3 479,427 - Ac3H11_4209 0.90 +2.0 479,427 - Ac3H11_4209 0.90 +0.1 479,427 - Ac3H11_4209 0.90 -1.4 479,427 - Ac3H11_4209 0.90 -3.2 479,427 - Ac3H11_4209 0.90 -3.0 479,427 - Ac3H11_4209 0.90 +3.5 479,453 + -0.7 479,453 + -3.8 479,454 - +0.1 479,454 - +0.8 479,454 - -3.1 479,489 - -1.1 479,553 - -2.4 479,648 + +1.3 479,648 + -2.7 479,648 + +1.5 479,648 + +1.2 479,807 - -1.9 479,807 - +0.4 479,926 + -2.8 479,926 + +1.3 479,926 + -3.0 479,926 + +0.3 479,927 - +2.3 479,927 - -0.6 479,927 - +1.7 479,927 - +0.8 479,927 - +3.0 479,927 - +0.2 479,927 - -0.9 479,927 - -0.8 479,927 - +0.0 479,950 + -2.0 479,950 + +2.1 479,951 - -1.7 479,951 - +1.2 479,951 - -1.0 479,990 - -0.6 480,070 - Ac3H11_4210 0.21 -0.6 480,070 - Ac3H11_4210 0.21 -1.1 480,313 + Ac3H11_4210 0.57 -0.5 480,313 + Ac3H11_4210 0.57 -0.6 480,313 + Ac3H11_4210 0.57 -1.2 480,313 + Ac3H11_4210 0.57 +0.3 480,313 + Ac3H11_4210 0.57 +1.0 480,314 - Ac3H11_4210 0.57 -2.6
Or see this region's nucleotide sequence