Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3529 and Ac3H11_3530 are separated by 314 nucleotides Ac3H11_3530 and Ac3H11_3531 overlap by 44 nucleotides Ac3H11_3531 and Ac3H11_3532 are separated by 136 nucleotides
Ac3H11_3529 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 74,146 to 75,741
_3529
Ac3H11_3530 - Ankyrin, at 76,056 to 77,477
_3530
Ac3H11_3531 - Ankyrin, at 77,434 to 77,694
_3531
Ac3H11_3532 - L-carnitine dehydratase/bile acid-inducible protein F, at 77,831 to 79,105
_3532
Position (kb) 76
77
78 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 75.368 kb on + strand, within Ac3H11_3529 at 75.635 kb on + strand at 75.635 kb on + strand at 75.635 kb on + strand at 75.635 kb on + strand at 75.636 kb on - strand at 75.636 kb on - strand at 75.797 kb on - strand at 75.797 kb on - strand at 75.803 kb on + strand at 75.803 kb on + strand at 75.803 kb on + strand at 75.803 kb on + strand at 75.804 kb on - strand at 75.804 kb on - strand at 75.804 kb on - strand at 75.804 kb on - strand at 75.804 kb on - strand at 75.804 kb on - strand at 75.804 kb on - strand at 75.804 kb on - strand at 76.795 kb on - strand, within Ac3H11_3530 at 76.912 kb on + strand, within Ac3H11_3530 at 76.912 kb on + strand, within Ac3H11_3530 at 76.913 kb on - strand, within Ac3H11_3530 at 76.913 kb on - strand, within Ac3H11_3530 at 76.913 kb on - strand, within Ac3H11_3530 at 76.913 kb on - strand, within Ac3H11_3530 at 76.913 kb on - strand, within Ac3H11_3530 at 76.913 kb on - strand, within Ac3H11_3530 at 77.832 kb on + strand at 78.203 kb on + strand, within Ac3H11_3532 at 78.204 kb on - strand, within Ac3H11_3532
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 75,368 + Ac3H11_3529 0.77 -0.0 75,635 + +0.6 75,635 + +2.4 75,635 + +1.4 75,635 + +1.7 75,636 - +0.9 75,636 - +1.3 75,797 - -3.1 75,797 - +2.3 75,803 + +0.0 75,803 + -2.5 75,803 + -0.3 75,803 + +0.8 75,804 - +1.4 75,804 - +2.9 75,804 - -0.8 75,804 - +0.0 75,804 - +4.9 75,804 - +2.1 75,804 - +1.3 75,804 - -0.2 76,795 - Ac3H11_3530 0.52 -0.9 76,912 + Ac3H11_3530 0.60 -2.0 76,912 + Ac3H11_3530 0.60 -0.7 76,913 - Ac3H11_3530 0.60 -2.4 76,913 - Ac3H11_3530 0.60 -2.5 76,913 - Ac3H11_3530 0.60 +1.7 76,913 - Ac3H11_3530 0.60 +0.0 76,913 - Ac3H11_3530 0.60 -0.4 76,913 - Ac3H11_3530 0.60 -1.5 77,832 + -1.8 78,203 + Ac3H11_3532 0.29 +1.5 78,204 - Ac3H11_3532 0.29 +2.5
Or see this region's nucleotide sequence