Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3357 and Ac3H11_3358 are separated by 160 nucleotides
Ac3H11_3357 - Zn-dependent protease with chaperone function PA4632, at 37,868 to 38,722
_3357
Ac3H11_3358 - AmpG permease, at 38,883 to 40,379
_3358
Position (kb) 38
39
40
41 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 37.893 kb on + strand at 37.893 kb on + strand at 37.894 kb on - strand at 37.894 kb on - strand at 37.894 kb on - strand at 38.322 kb on + strand, within Ac3H11_3357 at 38.322 kb on + strand, within Ac3H11_3357 at 38.322 kb on + strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.323 kb on - strand, within Ac3H11_3357 at 38.532 kb on + strand, within Ac3H11_3357 at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.722 kb on + strand at 38.723 kb on - strand at 38.723 kb on - strand at 38.723 kb on - strand at 38.723 kb on - strand at 38.751 kb on + strand at 38.752 kb on - strand at 38.752 kb on - strand at 38.818 kb on + strand at 38.819 kb on - strand at 38.819 kb on - strand at 38.832 kb on - strand at 38.832 kb on - strand at 38.832 kb on - strand at 38.832 kb on - strand at 38.834 kb on + strand at 38.834 kb on + strand at 38.834 kb on + strand at 38.835 kb on - strand at 39.030 kb on + strand at 39.031 kb on - strand at 39.031 kb on - strand at 39.180 kb on + strand, within Ac3H11_3358 at 39.180 kb on + strand, within Ac3H11_3358 at 39.181 kb on - strand, within Ac3H11_3358 at 39.459 kb on + strand, within Ac3H11_3358 at 39.571 kb on + strand, within Ac3H11_3358 at 39.627 kb on + strand, within Ac3H11_3358 at 39.628 kb on - strand, within Ac3H11_3358 at 39.628 kb on - strand, within Ac3H11_3358 at 39.864 kb on + strand, within Ac3H11_3358 at 39.865 kb on - strand, within Ac3H11_3358 at 39.915 kb on + strand, within Ac3H11_3358 at 39.915 kb on + strand, within Ac3H11_3358 at 39.915 kb on + strand, within Ac3H11_3358 at 39.916 kb on - strand at 39.916 kb on - strand, within Ac3H11_3358 at 40.162 kb on - strand, within Ac3H11_3358 at 40.239 kb on + strand at 40.239 kb on + strand at 40.240 kb on - strand at 40.240 kb on - strand at 40.240 kb on - strand at 40.257 kb on + strand at 40.641 kb on + strand at 40.952 kb on + strand at 40.953 kb on - strand at 40.953 kb on - strand at 40.953 kb on - strand at 40.953 kb on - strand at 40.953 kb on - strand at 40.953 kb on - strand at 41.018 kb on + strand at 41.018 kb on + strand at 41.018 kb on + strand at 41.019 kb on - strand at 41.019 kb on - strand at 41.099 kb on + strand at 41.099 kb on + strand at 41.099 kb on + strand at 41.099 kb on + strand at 41.100 kb on - strand at 41.100 kb on - strand at 41.100 kb on - strand at 41.150 kb on + strand at 41.150 kb on + strand at 41.150 kb on + strand at 41.195 kb on - strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.243 kb on + strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.244 kb on - strand at 41.312 kb on + strand at 41.313 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 37,893 + +1.5 37,893 + +0.6 37,894 - +0.1 37,894 - +0.6 37,894 - +1.1 38,322 + Ac3H11_3357 0.53 +0.1 38,322 + Ac3H11_3357 0.53 -0.5 38,322 + Ac3H11_3357 0.53 -1.5 38,323 - Ac3H11_3357 0.53 -3.8 38,323 - Ac3H11_3357 0.53 +0.9 38,323 - Ac3H11_3357 0.53 +0.2 38,323 - Ac3H11_3357 0.53 +1.1 38,323 - Ac3H11_3357 0.53 -0.5 38,323 - Ac3H11_3357 0.53 -1.8 38,323 - Ac3H11_3357 0.53 -2.6 38,323 - Ac3H11_3357 0.53 -0.6 38,532 + Ac3H11_3357 0.78 +0.2 38,722 + -1.6 38,722 + +1.0 38,722 + -0.6 38,722 + +0.7 38,722 + -3.4 38,722 + -0.1 38,722 + +1.4 38,722 + +0.8 38,722 + -1.5 38,723 - -0.5 38,723 - +0.5 38,723 - -3.3 38,723 - -2.1 38,751 + -0.1 38,752 - -0.5 38,752 - -3.3 38,818 + +1.1 38,819 - -2.1 38,819 - +0.6 38,832 - -2.8 38,832 - +0.3 38,832 - -4.0 38,832 - +0.6 38,834 + +0.4 38,834 + -1.3 38,834 + +2.8 38,835 - +2.2 39,030 + -2.7 39,031 - -0.0 39,031 - -1.4 39,180 + Ac3H11_3358 0.20 +1.5 39,180 + Ac3H11_3358 0.20 -1.3 39,181 - Ac3H11_3358 0.20 -1.8 39,459 + Ac3H11_3358 0.38 -3.2 39,571 + Ac3H11_3358 0.46 +2.8 39,627 + Ac3H11_3358 0.50 -2.2 39,628 - Ac3H11_3358 0.50 -1.0 39,628 - Ac3H11_3358 0.50 -3.1 39,864 + Ac3H11_3358 0.66 -1.7 39,865 - Ac3H11_3358 0.66 -2.3 39,915 + Ac3H11_3358 0.69 -2.5 39,915 + Ac3H11_3358 0.69 -0.7 39,915 + Ac3H11_3358 0.69 +1.4 39,916 - +0.2 39,916 - Ac3H11_3358 0.69 -0.1 40,162 - Ac3H11_3358 0.85 +0.2 40,239 + +1.4 40,239 + -1.6 40,240 - +0.8 40,240 - +0.2 40,240 - -2.1 40,257 + -0.8 40,641 + +0.0 40,952 + -3.4 40,953 - -1.2 40,953 - +0.6 40,953 - -0.2 40,953 - +1.0 40,953 - -2.4 40,953 - -1.0 41,018 + -2.5 41,018 + +0.4 41,018 + +0.2 41,019 - -3.1 41,019 - -0.0 41,099 + -1.2 41,099 + -2.5 41,099 + +0.2 41,099 + +0.7 41,100 - -0.6 41,100 - -2.4 41,100 - +1.6 41,150 + -1.9 41,150 + +1.6 41,150 + -0.3 41,195 - -1.5 41,243 + +0.3 41,243 + -0.5 41,243 + +1.9 41,243 + +0.7 41,243 + -2.7 41,243 + +1.5 41,244 - -0.8 41,244 - -0.6 41,244 - +2.0 41,244 - +1.3 41,244 - -2.9 41,244 - +0.8 41,312 + -0.8 41,313 - +0.8
Or see this region's nucleotide sequence