Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3196 and Ac3H11_3197 are separated by 128 nucleotides
Ac3H11_3196 - FIG001454: Transglutaminase-like enzymes, putative cysteine proteases, at 98,429 to 100,477
_3196
Ac3H11_3197 - Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-), at 100,606 to 101,565
_3197
Position (kb) 100
101
102 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 99.656 kb on + strand, within Ac3H11_3196 at 99.657 kb on - strand, within Ac3H11_3196 at 99.657 kb on - strand, within Ac3H11_3196 at 99.657 kb on - strand, within Ac3H11_3196 at 100.079 kb on + strand, within Ac3H11_3196 at 100.527 kb on - strand at 100.529 kb on + strand at 100.533 kb on - strand at 100.547 kb on + strand at 100.590 kb on + strand at 100.612 kb on + strand at 100.613 kb on - strand at 100.778 kb on - strand, within Ac3H11_3197 at 100.921 kb on + strand, within Ac3H11_3197 at 100.922 kb on - strand, within Ac3H11_3197 at 100.922 kb on - strand, within Ac3H11_3197 at 101.098 kb on + strand, within Ac3H11_3197 at 101.150 kb on - strand, within Ac3H11_3197 at 101.150 kb on - strand, within Ac3H11_3197 at 101.227 kb on + strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.450 kb on - strand, within Ac3H11_3197 at 101.504 kb on - strand at 101.504 kb on - strand at 101.504 kb on - strand at 101.617 kb on + strand at 101.617 kb on + strand at 101.648 kb on - strand at 101.648 kb on - strand at 101.668 kb on + strand at 101.668 kb on + strand at 101.668 kb on + strand at 101.669 kb on - strand at 101.834 kb on - strand at 102.551 kb on - strand at 102.551 kb on - strand at 102.551 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 99,656 + Ac3H11_3196 0.60 -2.6 99,657 - Ac3H11_3196 0.60 +2.2 99,657 - Ac3H11_3196 0.60 -0.5 99,657 - Ac3H11_3196 0.60 +0.4 100,079 + Ac3H11_3196 0.81 +2.2 100,527 - -0.2 100,529 + +0.2 100,533 - +1.4 100,547 + -0.8 100,590 + +1.4 100,612 + +1.3 100,613 - -0.1 100,778 - Ac3H11_3197 0.18 -3.1 100,921 + Ac3H11_3197 0.33 +2.2 100,922 - Ac3H11_3197 0.33 +0.4 100,922 - Ac3H11_3197 0.33 -0.8 101,098 + Ac3H11_3197 0.51 +2.3 101,150 - Ac3H11_3197 0.57 -1.0 101,150 - Ac3H11_3197 0.57 +1.9 101,227 + Ac3H11_3197 0.65 +0.8 101,228 - Ac3H11_3197 0.65 -1.5 101,228 - Ac3H11_3197 0.65 -2.5 101,228 - Ac3H11_3197 0.65 +0.0 101,228 - Ac3H11_3197 0.65 +0.9 101,228 - Ac3H11_3197 0.65 +2.5 101,450 - Ac3H11_3197 0.88 -0.2 101,504 - +0.8 101,504 - -0.0 101,504 - -2.6 101,617 + +0.1 101,617 + -0.1 101,648 - -3.1 101,648 - -0.1 101,668 + -0.3 101,668 + +0.8 101,668 + -2.9 101,669 - -1.3 101,834 - -0.7 102,551 - +0.4 102,551 - -0.1 102,551 - -0.4
Or see this region's nucleotide sequence