Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29060

Experiment: 1-ethyl-3-methylimidazolium chloride 170 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 170 mM
6,316,253	+		AO353_29055	0.54	+0.4
6,316,253	+		AO353_29055	0.54	-0.1
6,316,254	-		AO353_29055	0.55	+0.5
6,316,254	-		AO353_29055	0.55	+0.3
6,316,254	-		AO353_29055	0.55	-0.7
6,316,289	+		AO353_29055	0.57	+1.5
6,316,290	-		AO353_29055	0.57	-1.2
6,316,290	-		AO353_29055	0.57	-0.7
6,316,351	+		AO353_29055	0.61	-2.3
6,316,351	+		AO353_29055	0.61	-1.1
6,316,351	+		AO353_29055	0.61	+0.9
6,316,351	+		AO353_29055	0.61	-0.3
6,316,351	+		AO353_29055	0.61	+0.8
6,316,351	+		AO353_29055	0.61	-0.0
6,316,412	+		AO353_29055	0.65	-0.1
6,316,413	-		AO353_29055	0.65	-0.0
6,316,413	-		AO353_29055	0.65	-0.5
6,316,413	-		AO353_29055	0.65	+0.3
6,316,434	-		AO353_29055	0.66	-0.9
6,316,610	+		AO353_29055	0.77	+0.8
6,316,766	+		AO353_29055	0.87	-1.1
6,316,766	+		AO353_29055	0.87	-0.5
6,316,766	+		AO353_29055	0.87	+0.5
6,316,767	-		AO353_29055	0.87	+0.2
6,316,767	-		AO353_29055	0.87	+1.2
6,316,767	-		AO353_29055	0.87	-0.5
6,316,767	-		AO353_29055	0.87	-0.2
6,316,767	-		AO353_29055	0.87	-0.2
6,316,767	-		AO353_29055	0.87	-1.1
6,316,782	-		AO353_29055	0.88	-1.1
6,316,782	-		AO353_29055	0.88	-0.1
6,316,946	+				-1.7
6,316,946	+				-0.1
6,316,946	+				+0.5
6,316,946	+				-0.8
6,316,946	+				-0.5
6,316,946	+				+0.8
6,316,947	-				+0.3
6,316,947	-				-0.5
6,316,998	+				-0.2
6,316,998	+				+0.0
6,316,999	-				+0.2
6,317,045	+				+0.1
6,317,045	+				+0.5
6,317,045	+				+1.1
6,317,045	+				-0.1
6,317,045	+				-1.4
6,317,046	-				-0.4
6,317,046	-				+0.3
6,317,046	-				+0.2
6,317,046	-				+0.6
6,317,046	-				-0.8
6,317,046	-				+0.7
6,317,046	-				+0.1
6,317,092	+				-1.6
6,317,093	-				-1.1
6,317,127	-				-0.1
6,317,148	+				+0.1
6,317,148	+				-0.7
6,317,148	+				-0.2
6,317,148	+				-1.2
6,317,148	+				-1.1
6,317,148	+				+0.5
6,317,148	+				-1.3
6,317,149	-				+0.8
6,317,149	-				-0.5
6,317,149	-				-0.3
6,317,149	-				-1.2
6,317,149	-				-0.6
6,317,149	-				+0.8
6,317,207	+		AO353_29060	0.13	-0.0
6,317,207	+		AO353_29060	0.13	-2.1
6,317,207	+		AO353_29060	0.13	-1.1
6,317,208	-		AO353_29060	0.13	+1.5
6,317,208	-		AO353_29060	0.13	-0.3
6,317,208	-		AO353_29060	0.13	-0.3
6,317,209	+		AO353_29060	0.13	-0.0
6,317,209	+		AO353_29060	0.13	+1.1
6,317,209	+		AO353_29060	0.13	+0.8
6,317,209	+		AO353_29060	0.13	-0.8
6,317,209	+		AO353_29060	0.13	-0.5
6,317,209	+		AO353_29060	0.13	-1.3
6,317,209	+		AO353_29060	0.13	-1.3
6,317,209	+		AO353_29060	0.13	-0.2
6,317,210	-		AO353_29060	0.14	-0.4
6,317,210	-		AO353_29060	0.14	+0.0
6,317,210	-		AO353_29060	0.14	-0.7
6,317,210	-		AO353_29060	0.14	+0.9
6,317,210	-		AO353_29060	0.14	-0.4
6,317,210	-		AO353_29060	0.14	-0.8
6,317,210	-		AO353_29060	0.14	-0.4
6,317,210	-		AO353_29060	0.14	+0.5
6,317,211	+		AO353_29060	0.14	+0.2
6,317,211	+		AO353_29060	0.14	+0.5
6,317,211	+		AO353_29060	0.14	-1.1
6,317,211	+		AO353_29060	0.14	-0.5
6,317,211	+		AO353_29060	0.14	-2.8
6,317,211	+		AO353_29060	0.14	-1.2
6,317,212	-		AO353_29060	0.14	+0.0
6,317,212	-		AO353_29060	0.14	+0.1
6,317,212	-		AO353_29060	0.14	-0.8
6,317,212	-		AO353_29060	0.14	-1.1
6,317,333	-		AO353_29060	0.31	-2.1
6,317,470	+		AO353_29060	0.50	+1.2
6,317,470	+		AO353_29060	0.50	-0.7
6,317,471	-		AO353_29060	0.50	+0.1
6,317,471	-		AO353_29060	0.50	-0.7
6,317,509	+		AO353_29060	0.55	-0.5
6,317,509	+		AO353_29060	0.55	+2.8
6,317,510	-		AO353_29060	0.56	-0.0
6,317,528	-		AO353_29060	0.58	-1.1
6,317,608	+		AO353_29060	0.69	-0.6
6,317,609	-		AO353_29060	0.69	+0.4
6,317,703	+		AO353_29060	0.83	-1.3
6,317,770	+				-0.7
6,317,945	+		AO353_29065	0.29	+1.5
6,317,945	+		AO353_29065	0.29	-0.3
6,317,945	+		AO353_29065	0.29	-0.4
6,317,945	+		AO353_29065	0.29	-1.7
6,317,945	+		AO353_29065	0.29	+0.5
6,317,946	-		AO353_29065	0.29	-1.3
6,317,987	+		AO353_29065	0.40	-0.9
6,317,987	+		AO353_29065	0.40	+0.1
6,317,987	+		AO353_29065	0.40	+0.9
6,317,987	+		AO353_29065	0.40	+0.0
6,317,988	-		AO353_29065	0.40	-2.1
6,317,988	-		AO353_29065	0.40	+1.3
6,317,988	-		AO353_29065	0.40	-0.2
6,317,988	-		AO353_29065	0.40	+1.1
6,317,988	-		AO353_29065	0.40	+0.2
6,317,988	-		AO353_29065	0.40	+0.5
6,317,988	-		AO353_29065	0.40	-2.9
6,317,988	-		AO353_29065	0.40	-1.0
6,318,258	-				+0.3
6,318,273	+				-0.5
6,318,273	+				-0.5
6,318,273	+				-0.0
6,318,273	+				-0.5
6,318,274	-				-0.6
6,318,274	-				+1.2
6,318,274	-				+0.5
6,318,375	+				-3.1
6,318,375	+				-0.2
6,318,375	+				-0.0
6,318,375	+				+0.2
6,318,375	+				-0.3
6,318,375	+				-0.5
6,318,376	-				+0.5
6,318,376	-				-1.4
6,318,376	-				+0.5
6,318,384	+				-0.7
6,318,385	-				+0.9
6,318,385	-				+0.2
6,318,385	-				+0.3
6,318,385	-				-0.5
6,318,414	+				-1.3
6,318,414	+				-0.8
6,318,414	+				-2.1
6,318,414	+				+1.5
6,318,414	+				-2.5
6,318,414	+				-0.2
6,318,414	+				+1.2
6,318,415	-				-0.5
6,318,415	-				-0.3
6,318,415	-				+0.5
6,318,415	-				-1.5
6,318,415	-				-1.5
6,318,446	-				+0.2
6,318,544	+		AO353_29070	0.11	+0.2
6,318,544	+		AO353_29070	0.11	+1.1
6,318,544	+		AO353_29070	0.11	+0.5
6,318,544	+		AO353_29070	0.11	+2.2
6,318,545	-		AO353_29070	0.11	+1.5
6,318,545	-		AO353_29070	0.11	-0.3
6,318,545	-		AO353_29070	0.11	+1.6
6,318,545	-		AO353_29070	0.11	+0.0
6,318,545	-		AO353_29070	0.11	-0.1
6,318,545	-		AO353_29070	0.11	+1.7
6,318,545	-		AO353_29070	0.11	-0.4
6,318,545	-		AO353_29070	0.11	+1.2
6,318,550	+		AO353_29070	0.11	+1.6
6,318,551	-		AO353_29070	0.11	+0.8
6,318,551	-		AO353_29070	0.11	+0.9
6,318,551	-		AO353_29070	0.11	+0.5
6,318,727	+		AO353_29070	0.22	+0.8
6,318,727	+		AO353_29070	0.22	+0.8
6,318,728	-		AO353_29070	0.22	+1.0
6,318,728	-		AO353_29070	0.22	+0.5
6,318,728	-		AO353_29070	0.22	-0.7
6,318,728	-		AO353_29070	0.22	+0.3
6,318,728	-		AO353_29070	0.22	+0.3
6,318,728	-		AO353_29070	0.22	-0.1
6,318,728	-		AO353_29070	0.22	+0.9