Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28940

Experiment: 1-ethyl-3-methylimidazolium chloride 170 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 170 mM
6,289,185	+				-0.7
6,289,185	+				-1.5
6,289,186	-				+0.3
6,289,202	+				-0.3
6,289,267	-				-0.1
6,289,276	+				-0.8
6,289,276	+				+1.2
6,289,277	-				-0.8
6,289,280	-				+0.1
6,289,363	+				+0.1
6,289,364	-				+0.2
6,289,375	+				-1.6
6,289,376	-				+1.5
6,289,581	-		AO353_28930	0.51	+0.8
6,289,635	+		AO353_28930	0.70	-0.7
6,289,635	+		AO353_28930	0.70	-2.1
6,289,636	-		AO353_28930	0.71	-0.1
6,289,636	-		AO353_28930	0.71	+0.2
6,289,705	+				-0.5
6,289,705	+				+1.0
6,289,705	+				+0.5
6,289,705	+				+0.5
6,289,705	+				+0.8
6,289,705	+				-1.5
6,289,705	+				+0.2
6,289,705	+				-0.1
6,289,705	+				-0.7
6,289,705	+				-0.2
6,289,709	+				+0.6
6,289,709	+				+0.1
6,289,709	+				+0.6
6,289,729	+				-1.1
6,289,729	+				+0.3
6,289,729	+				+0.5
6,289,729	+				-0.5
6,289,729	+				+3.6
6,289,729	+				+0.2
6,289,730	-				-1.8
6,289,730	-				+0.9
6,289,730	-				+0.8
6,289,730	-				+0.7
6,289,730	-				+0.7
6,289,730	-				+1.7
6,289,766	+				-0.7
6,289,767	-				-0.8
6,289,767	-				+0.3
6,289,793	+				-0.8
6,289,793	+				-0.1
6,289,793	+				+1.0
6,289,793	+				-0.1
6,289,793	+				+0.9
6,289,793	+				-1.3
6,289,793	+				-1.6
6,289,793	+				-0.3
6,289,793	+				+1.5
6,289,793	+				+0.5
6,289,793	+				-0.1
6,289,793	+				-0.9
6,289,793	+				-0.9
6,289,793	+				-0.9
6,289,793	+				-0.3
6,289,794	-				+0.5
6,289,794	-				+1.8
6,289,794	-				-1.7
6,289,795	+				-1.1
6,289,795	+				-3.2
6,289,795	+				-1.4
6,289,795	+				-0.8
6,289,795	+				-0.5
6,289,795	+				-0.0
6,289,795	+				+0.1
6,289,795	+				-1.8
6,289,795	+				-1.3
6,289,795	+				-2.0
6,289,795	+				-0.0
6,289,795	+				+0.5
6,289,795	+				+1.3
6,289,795	+				+0.9
6,289,795	+				-1.1
6,289,795	+				+1.1
6,289,795	+				+1.1
6,289,795	+				+0.5
6,289,795	+				+0.5
6,289,796	-				+0.5
6,289,796	-				+0.6
6,289,796	-				+1.6
6,289,796	-				-1.4
6,289,796	-				+1.1
6,289,796	-				+1.5
6,289,796	-				-1.3
6,289,796	-				+0.5
6,289,796	-				+0.5
6,289,796	-				+1.5
6,289,796	-				-1.8
6,289,796	-				-0.0
6,289,796	-				-2.1
6,289,796	-				-1.8
6,289,840	+				+1.1
6,289,840	+				+0.5
6,289,840	+				-0.7
6,289,840	+				-2.3
6,289,841	-				+1.5
6,289,841	-				-0.1
6,289,841	-				-3.0
6,289,841	-				-1.0
6,289,841	-				-1.1
6,289,844	+				-0.0
6,289,844	+				-1.4
6,289,844	+				-0.1
6,289,845	-				-1.1
6,289,845	-				-1.1
6,289,845	-				+0.2
6,289,845	-				-0.5
6,289,845	-				+0.1
6,289,875	+				+0.9
6,289,906	+				+0.1
6,289,917	+				+0.5
6,289,937	+				+0.6
6,289,937	+				+0.6
6,289,937	+				-0.5
6,289,937	+				-0.0
6,289,937	+				+2.1
6,289,938	-				-0.2
6,289,951	+				-0.5
6,289,964	-				-0.5
6,290,005	+				+0.5
6,290,005	+				+2.8
6,290,005	+				-2.1
6,290,005	+				+0.4
6,290,005	+				-2.3
6,290,006	-				-0.0
6,290,006	-				-0.9
6,290,053	+				+0.5
6,290,054	-				-0.7
6,290,136	+		AO353_28935	0.55	-2.3
6,290,136	+		AO353_28935	0.55	+0.8
6,290,136	+		AO353_28935	0.55	+0.6
6,290,136	+		AO353_28935	0.55	+1.6
6,290,137	-		AO353_28935	0.56	+0.1
6,290,179	+				-1.5
6,290,180	-				-0.5
6,290,196	+				+1.1
6,290,309	+				+1.9
6,290,310	-				+0.5
6,290,357	+		AO353_28940	0.10	+2.5
6,290,405	+		AO353_28940	0.13	-1.1
6,290,405	+		AO353_28940	0.13	-1.5
6,290,525	+		AO353_28940	0.20	-0.5
6,290,525	+		AO353_28940	0.20	+2.1
6,290,525	+		AO353_28940	0.20	-0.5
6,290,526	-		AO353_28940	0.20	+1.1
6,290,526	-		AO353_28940	0.20	+1.5
6,290,549	+		AO353_28940	0.21	+1.8
6,290,549	+		AO353_28940	0.21	+0.5
6,290,549	+		AO353_28940	0.21	-0.5
6,290,550	-		AO353_28940	0.21	-0.3
6,290,550	-		AO353_28940	0.21	+0.3
6,290,550	-		AO353_28940	0.21	-0.2
6,290,550	-		AO353_28940	0.21	+1.1
6,290,776	+		AO353_28940	0.34	+0.8
6,290,776	+		AO353_28940	0.34	+1.7
6,290,776	+		AO353_28940	0.34	-0.5
6,290,777	-		AO353_28940	0.34	-1.8
6,290,808	-		AO353_28940	0.36	+0.1
6,290,991	-				+0.5
6,291,090	+		AO353_28940	0.52	+2.1
6,291,090	+		AO353_28940	0.52	+0.5
6,291,090	+		AO353_28940	0.52	+2.8
6,291,090	+		AO353_28940	0.52	+0.5
6,291,090	+		AO353_28940	0.52	-1.1
6,291,090	+		AO353_28940	0.52	+2.1
6,291,090	+		AO353_28940	0.52	+1.5
6,291,090	+		AO353_28940	0.52	+1.1
6,291,090	+		AO353_28940	0.52	+0.2
6,291,091	-		AO353_28940	0.52	-1.3
6,291,091	-		AO353_28940	0.52	-0.2
6,291,091	-		AO353_28940	0.52	-0.3
6,291,091	-		AO353_28940	0.52	+0.5
6,291,091	-		AO353_28940	0.52	-2.1
6,291,091	-		AO353_28940	0.52	-0.5
6,291,162	-		AO353_28940	0.56	-1.0
6,291,404	+		AO353_28940	0.69	-1.8
6,291,404	+		AO353_28940	0.69	-1.3
6,291,417	+		AO353_28940	0.70	+1.1
6,291,417	+		AO353_28940	0.70	-0.5
6,291,418	-		AO353_28940	0.70	-1.2
6,291,463	+		AO353_28940	0.73	+1.2
6,291,464	-		AO353_28940	0.73	+0.5
6,291,464	-		AO353_28940	0.73	-1.5
6,291,473	+		AO353_28940	0.73	+0.2
6,291,473	+		AO353_28940	0.73	-1.5
6,291,473	+		AO353_28940	0.73	+0.8
6,291,473	+		AO353_28940	0.73	-1.1
6,291,474	-		AO353_28940	0.73	-2.7
6,291,474	-		AO353_28940	0.73	+0.5
6,291,635	+		AO353_28940	0.82	+0.2
6,291,635	+		AO353_28940	0.82	-1.5
6,291,636	-		AO353_28940	0.82	-0.3
6,291,636	-		AO353_28940	0.82	+0.7
6,291,704	+		AO353_28940	0.86	+1.6
6,291,704	+		AO353_28940	0.86	-1.1
6,291,705	-		AO353_28940	0.86	-1.7
6,291,736	-		AO353_28940	0.88	-2.2
6,291,849	+				-1.8
6,291,849	+				+0.2
6,291,890	+				+0.5
6,291,890	+				+1.9
6,291,890	+				-0.1
6,291,890	+				-0.5
6,291,890	+				-0.8
6,291,890	+				-2.1
6,291,890	+				-1.1
6,291,890	+				-0.2
6,291,890	+				+0.0
6,291,891	-				-0.6
6,291,891	-				-0.3
6,291,891	-				-1.8
6,291,891	-				+0.0
6,291,891	-				+1.5
6,291,891	-				+1.2
6,291,891	-				-0.1
6,291,891	-				+1.5
6,291,965	+				+0.4
6,291,965	+				-0.0
6,291,965	+				-0.3
6,291,965	+				-0.2
6,291,965	+				-1.5
6,291,965	+				+0.4
6,291,965	+				-0.4
6,291,966	-				-1.5
6,291,966	-				-0.9
6,291,966	-				-1.7
6,291,966	-				-0.2
6,291,966	-				-0.2
6,291,966	-				-0.3
6,291,998	-				+1.5
6,292,074	+				-1.5
6,292,075	-				+0.9
6,292,075	-				-0.7
6,292,179	-		AO353_28945	0.11	-1.1