Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14285

Experiment: 1-ethyl-3-methylimidazolium chloride 170 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 170 mM
3,168,741	+		AO353_14280	0.56	+0.4
3,168,741	+		AO353_14280	0.56	-0.9
3,168,741	+		AO353_14280	0.56	-0.5
3,168,741	+		AO353_14280	0.56	+0.4
3,168,741	+		AO353_14280	0.56	-0.2
3,168,741	+		AO353_14280	0.56	+0.9
3,168,741	+		AO353_14280	0.56	-1.5
3,168,741	+		AO353_14280	0.56	-0.3
3,168,742	-		AO353_14280	0.56	-0.7
3,168,742	-		AO353_14280	0.56	-0.4
3,168,742	-		AO353_14280	0.56	-0.1
3,168,742	-		AO353_14280	0.56	-0.8
3,168,742	-		AO353_14280	0.56	+0.1
3,168,742	-		AO353_14280	0.56	-0.0
3,168,742	-		AO353_14280	0.56	+2.1
3,168,742	-		AO353_14280	0.56	-0.1
3,168,742	-		AO353_14280	0.56	-0.7
3,168,742	-		AO353_14280	0.56	+0.4
3,168,742	-		AO353_14280	0.56	+2.0
3,168,745	+		AO353_14280	0.56	+1.7
3,168,745	+		AO353_14280	0.56	+1.1
3,168,745	+		AO353_14280	0.56	+0.1
3,168,745	+		AO353_14280	0.56	-0.9
3,168,745	+		AO353_14280	0.56	-0.7
3,168,746	-		AO353_14280	0.56	+0.4
3,168,746	-		AO353_14280	0.56	-0.8
3,168,746	-		AO353_14280	0.56	-0.1
3,168,746	-		AO353_14280	0.56	+1.3
3,168,746	-		AO353_14280	0.56	+0.1
3,168,746	-		AO353_14280	0.56	+0.1
3,168,774	+		AO353_14280	0.58	-1.2
3,168,774	+		AO353_14280	0.58	+1.4
3,168,774	+		AO353_14280	0.58	+0.7
3,168,817	+		AO353_14280	0.62	+0.3
3,168,820	+		AO353_14280	0.62	+0.1
3,168,820	+		AO353_14280	0.62	+1.1
3,168,820	+		AO353_14280	0.62	+1.0
3,168,820	+		AO353_14280	0.62	-1.1
3,168,820	+		AO353_14280	0.62	+2.1
3,168,821	-		AO353_14280	0.62	-0.5
3,168,821	-		AO353_14280	0.62	+0.7
3,168,821	-		AO353_14280	0.62	-0.1
3,168,821	-		AO353_14280	0.62	-1.3
3,168,821	-		AO353_14280	0.62	-1.5
3,168,821	-		AO353_14280	0.62	+0.2
3,168,855	+		AO353_14280	0.65	+0.5
3,168,909	+		AO353_14280	0.69	+0.7
3,168,909	+		AO353_14280	0.69	-0.3
3,168,909	+		AO353_14280	0.69	+0.7
3,168,909	+		AO353_14280	0.69	-0.1
3,168,909	+		AO353_14280	0.69	-2.1
3,168,909	+		AO353_14280	0.69	-0.7
3,168,909	+		AO353_14280	0.69	-0.2
3,168,909	+		AO353_14280	0.69	-1.5
3,168,909	+		AO353_14280	0.69	+0.4
3,168,909	+		AO353_14280	0.69	-0.5
3,168,909	+		AO353_14280	0.69	-1.2
3,168,910	-		AO353_14280	0.69	-0.9
3,168,910	-		AO353_14280	0.69	-1.0
3,168,910	-		AO353_14280	0.69	-0.6
3,168,910	-		AO353_14280	0.69	+1.0
3,168,910	-		AO353_14280	0.69	+0.7
3,168,910	-		AO353_14280	0.69	+0.5
3,168,910	-		AO353_14280	0.69	-0.4
3,168,910	-		AO353_14280	0.69	+0.8
3,168,910	-		AO353_14280	0.69	+0.8
3,168,916	+		AO353_14280	0.70	+1.7
3,168,916	+		AO353_14280	0.70	+0.0
3,168,916	+		AO353_14280	0.70	+0.5
3,168,916	+		AO353_14280	0.70	+0.6
3,168,916	+		AO353_14280	0.70	-1.2
3,168,916	+		AO353_14280	0.70	+1.7
3,168,916	+		AO353_14280	0.70	+1.1
3,168,916	+		AO353_14280	0.70	+0.3
3,168,917	-		AO353_14280	0.70	-1.5
3,168,917	-		AO353_14280	0.70	+0.5
3,168,917	-		AO353_14280	0.70	+0.5
3,168,917	-		AO353_14280	0.70	-0.6
3,168,917	-		AO353_14280	0.70	-0.2
3,168,917	-		AO353_14280	0.70	-0.6
3,168,917	-		AO353_14280	0.70	+0.1
3,168,917	-		AO353_14280	0.70	-0.4
3,168,937	+		AO353_14280	0.71	-0.0
3,168,937	+		AO353_14280	0.71	-0.5
3,168,937	+		AO353_14280	0.71	+0.1
3,168,937	+		AO353_14280	0.71	-1.2
3,168,937	+		AO353_14280	0.71	+0.1
3,168,937	+		AO353_14280	0.71	-1.0
3,168,937	+		AO353_14280	0.71	-0.5
3,168,937	+		AO353_14280	0.71	+0.1
3,168,937	+		AO353_14280	0.71	+0.3
3,168,937	+		AO353_14280	0.71	+0.3
3,168,937	+		AO353_14280	0.71	+0.3
3,168,937	+		AO353_14280	0.71	-2.5
3,168,937	+		AO353_14280	0.71	-1.2
3,168,937	+		AO353_14280	0.71	-0.9
3,168,937	+		AO353_14280	0.71	+0.1
3,168,937	+		AO353_14280	0.71	-0.7
3,168,937	+		AO353_14280	0.71	-1.5
3,168,937	+		AO353_14280	0.71	-0.1
3,168,937	+		AO353_14280	0.71	+0.6
3,168,937	+		AO353_14280	0.71	-0.2
3,168,937	+		AO353_14280	0.71	-1.2
3,168,937	+		AO353_14280	0.71	+1.1
3,168,937	+		AO353_14280	0.71	-1.4
3,168,937	+		AO353_14280	0.71	-0.1
3,168,938	-		AO353_14280	0.71	-0.5
3,168,938	-		AO353_14280	0.71	+0.2
3,168,938	-		AO353_14280	0.71	-0.1
3,168,938	-		AO353_14280	0.71	+0.4
3,168,938	-		AO353_14280	0.71	+0.7
3,168,938	-		AO353_14280	0.71	+0.3
3,168,938	-		AO353_14280	0.71	+0.3
3,168,938	-		AO353_14280	0.71	-0.3
3,168,938	-		AO353_14280	0.71	-0.8
3,168,938	-		AO353_14280	0.71	-0.1
3,168,938	-		AO353_14280	0.71	+0.9
3,168,938	-		AO353_14280	0.71	+0.1
3,168,938	-		AO353_14280	0.71	-1.3
3,168,938	-		AO353_14280	0.71	-0.3
3,168,938	-		AO353_14280	0.71	-2.2
3,168,938	-		AO353_14280	0.71	+0.9
3,168,938	-		AO353_14280	0.71	-0.9
3,168,938	-		AO353_14280	0.71	-0.1
3,168,938	-		AO353_14280	0.71	-1.2
3,168,938	-		AO353_14280	0.71	-0.8
3,168,938	-		AO353_14280	0.71	+0.1
3,168,938	-		AO353_14280	0.71	-0.5
3,168,938	-		AO353_14280	0.71	+0.1
3,168,938	-		AO353_14280	0.71	+0.7
3,168,938	-		AO353_14280	0.71	-0.1
3,168,938	-		AO353_14280	0.71	+0.0
3,168,945	+		AO353_14280	0.72	+0.9
3,168,945	+		AO353_14280	0.72	-0.0
3,168,945	+		AO353_14280	0.72	-0.4
3,168,946	-		AO353_14280	0.72	-0.3
3,168,946	-		AO353_14280	0.72	+0.8
3,168,946	-		AO353_14280	0.72	-0.2
3,169,003	+		AO353_14280	0.76	-1.0
3,169,003	+		AO353_14280	0.76	+2.9
3,169,004	-		AO353_14280	0.76	+1.1
3,169,004	-		AO353_14280	0.76	+0.8
3,169,004	-		AO353_14280	0.76	+0.2
3,169,015	+		AO353_14280	0.77	+0.4
3,169,015	+		AO353_14280	0.77	+0.3
3,169,016	-				+2.1
3,169,045	+		AO353_14280	0.80	+1.5
3,169,045	+		AO353_14280	0.80	+0.4
3,169,046	-		AO353_14280	0.80	+0.4
3,169,046	-		AO353_14280	0.80	-0.4
3,169,046	-		AO353_14280	0.80	-0.3
3,169,051	+		AO353_14280	0.80	-0.1
3,169,052	-		AO353_14280	0.80	+1.3
3,169,052	-		AO353_14280	0.80	-0.0
3,169,052	-		AO353_14280	0.80	-0.8
3,169,099	+		AO353_14280	0.84	-0.9
3,169,099	+		AO353_14280	0.84	+1.1
3,169,099	+		AO353_14280	0.84	+0.5
3,169,099	+		AO353_14280	0.84	+0.5
3,169,099	+		AO353_14280	0.84	-0.7
3,169,099	+		AO353_14280	0.84	+0.8
3,169,099	+		AO353_14280	0.84	-0.5
3,169,099	+		AO353_14280	0.84	-0.6
3,169,100	-		AO353_14280	0.84	+0.1
3,169,100	-		AO353_14280	0.84	+0.5
3,169,100	-		AO353_14280	0.84	+0.6
3,169,100	-		AO353_14280	0.84	+0.4
3,169,100	-		AO353_14280	0.84	+0.6
3,169,100	-		AO353_14280	0.84	+0.3
3,169,100	-		AO353_14280	0.84	+0.4
3,169,174	+		AO353_14280	0.90	+0.8
3,169,174	+		AO353_14280	0.90	+0.1
3,169,174	+		AO353_14280	0.90	-0.3
3,169,174	+		AO353_14280	0.90	+2.7
3,169,175	-		AO353_14280	0.90	+1.7
3,169,175	-		AO353_14280	0.90	+1.1
3,169,244	-				-1.5
3,169,244	-				-0.1
3,169,282	+				+0.4
3,169,282	+				+0.1
3,169,282	+				-1.3
3,169,283	-				-0.1
3,169,283	-				-1.2
3,169,283	-				-0.9
3,169,283	-				-0.0
3,169,283	-				+0.5
3,169,298	+				+0.5
3,169,298	+				-0.2
3,169,298	+				-0.8
3,169,298	+				+0.9
3,169,299	-				+0.5
3,169,299	-				-0.8
3,169,299	-				+1.4
3,169,299	-				+0.5
3,169,299	-				-0.6
3,169,345	+				+1.8
3,169,346	-				-0.5
3,169,346	-				-0.2
3,169,455	+				+0.1
3,169,456	-				-0.4
3,169,737	+		AO353_14285	0.29	+1.4
3,169,737	+		AO353_14285	0.29	+1.1
3,169,737	+		AO353_14285	0.29	-0.7
3,169,737	+		AO353_14285	0.29	+0.9
3,169,737	+		AO353_14285	0.29	-0.6
3,169,737	+		AO353_14285	0.29	+1.3
3,169,737	+		AO353_14285	0.29	-0.5
3,169,737	+		AO353_14285	0.29	-0.7
3,169,737	+		AO353_14285	0.29	-1.5
3,169,738	-		AO353_14285	0.30	+1.3
3,169,738	-		AO353_14285	0.30	-1.2
3,169,738	-		AO353_14285	0.30	-0.1
3,169,738	-		AO353_14285	0.30	-1.1
3,169,738	-		AO353_14285	0.30	-0.4
3,169,738	-		AO353_14285	0.30	-0.1
3,169,738	-		AO353_14285	0.30	-2.1
3,169,738	-		AO353_14285	0.30	+0.1
3,169,738	-		AO353_14285	0.30	-0.8
3,169,739	+		AO353_14285	0.30	-0.6
3,169,739	+		AO353_14285	0.30	-1.5
3,169,739	+		AO353_14285	0.30	+0.3
3,169,739	+		AO353_14285	0.30	-0.2
3,169,739	+		AO353_14285	0.30	+0.3
3,169,739	+		AO353_14285	0.30	+1.0
3,169,740	-		AO353_14285	0.30	-1.9
3,169,740	-		AO353_14285	0.30	-0.9
3,169,740	-		AO353_14285	0.30	+0.3
3,169,740	-		AO353_14285	0.30	-1.2
3,169,759	+		AO353_14285	0.33	+0.9
3,169,759	+		AO353_14285	0.33	-0.8
3,169,759	+		AO353_14285	0.33	-2.1
3,169,759	+		AO353_14285	0.33	-0.6
3,169,760	-		AO353_14285	0.33	-0.1
3,169,760	-		AO353_14285	0.33	+0.5
3,169,760	-		AO353_14285	0.33	-0.8
3,169,760	-		AO353_14285	0.33	-0.4
3,170,244	+		AO353_14290	0.14	+0.1
3,170,244	+		AO353_14290	0.14	-0.2
3,170,244	+		AO353_14290	0.14	-1.2
3,170,244	+		AO353_14290	0.14	-0.6
3,170,244	+		AO353_14290	0.14	-1.6
3,170,245	-		AO353_14290	0.15	-0.2
3,170,245	-		AO353_14290	0.15	-0.3
3,170,245	-		AO353_14290	0.15	+0.4
3,170,280	+		AO353_14290	0.29	+0.8
3,170,280	+		AO353_14290	0.29	-0.5
3,170,280	+		AO353_14290	0.29	+1.7
3,170,280	+		AO353_14290	0.29	-0.5
3,170,281	-		AO353_14290	0.30	-1.5
3,170,281	-		AO353_14290	0.30	+0.5
3,170,281	-		AO353_14290	0.30	-0.5
3,170,281	-		AO353_14290	0.30	-0.5
3,170,281	-		AO353_14290	0.30	+0.5
3,170,281	-		AO353_14290	0.30	-2.5
3,170,281	-		AO353_14290	0.30	+1.1
3,170,281	-		AO353_14290	0.30	-0.5
3,170,371	-		AO353_14290	0.67	-1.7
3,170,371	-		AO353_14290	0.67	-0.3
3,170,457	+				+0.5
3,170,458	-				-0.5
3,170,487	+				-3.2
3,170,487	+				+0.1
3,170,487	+				+1.1
3,170,487	+				+0.2
3,170,487	+				-1.3
3,170,487	+				-0.1
3,170,487	+				-0.9
3,170,487	+				+1.3
3,170,487	+				+1.4
3,170,487	+				-3.3
3,170,488	-				+0.1
3,170,488	-				+0.8
3,170,488	-				+0.1
3,170,488	-				-0.8
3,170,534	+				-0.8
3,170,535	-				+0.1
3,170,535	-				-0.2
3,170,535	-				+1.1
3,170,570	+				-0.5
3,170,571	-				+0.3
3,170,585	+				+0.8
3,170,586	-				-2.2
3,170,586	-				+0.9
3,170,586	-				-0.7
3,170,586	-				-0.1
3,170,586	-				-1.5
3,170,586	-				+0.4
3,170,785	+		AO353_14295	0.23	+0.5
3,170,785	+		AO353_14295	0.23	-1.4
3,170,786	-		AO353_14295	0.23	-1.5
3,170,786	-		AO353_14295	0.23	+0.6
3,170,786	-		AO353_14295	0.23	+1.1
3,170,907	+		AO353_14295	0.36	+0.0
3,170,907	+		AO353_14295	0.36	-2.3
3,170,919	+		AO353_14295	0.37	+0.3
3,170,920	-		AO353_14295	0.37	+1.7
3,171,054	+		AO353_14295	0.52	-1.3
3,171,054	+		AO353_14295	0.52	-0.4
3,171,054	+		AO353_14295	0.52	-0.0
3,171,054	+		AO353_14295	0.52	-0.0
3,171,055	-		AO353_14295	0.52	-0.2
3,171,055	-		AO353_14295	0.52	+1.1
3,171,055	-		AO353_14295	0.52	+0.7
3,171,055	-		AO353_14295	0.52	+0.1
3,171,055	-		AO353_14295	0.52	+0.7
3,171,055	-		AO353_14295	0.52	-0.5
3,171,081	+		AO353_14295	0.55	-0.5
3,171,081	+		AO353_14295	0.55	+0.1
3,171,081	+		AO353_14295	0.55	+1.1
3,171,081	+		AO353_14295	0.55	-0.0
3,171,082	-		AO353_14295	0.55	-0.2
3,171,082	-		AO353_14295	0.55	+0.5
3,171,159	+		AO353_14295	0.63	+1.1
3,171,159	+		AO353_14295	0.63	+0.3
3,171,159	+		AO353_14295	0.63	-0.0
3,171,160	-		AO353_14295	0.63	+0.3
3,171,160	-		AO353_14295	0.63	-0.0
3,171,160	-		AO353_14295	0.63	+2.1