Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14255

Experiment: 1-ethyl-3-methylimidazolium chloride 170 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 170 mM
3,161,807	-				+1.4
3,161,818	+				+0.4
3,162,040	+				+0.5
3,162,040	+				-0.5
3,162,040	+				-1.0
3,162,057	+				+0.2
3,162,057	+				+0.9
3,162,057	+				-0.6
3,162,057	+				-0.2
3,162,101	+				+0.3
3,162,101	+				-0.1
3,162,101	+				+2.7
3,162,101	+				-1.2
3,162,101	+				+1.1
3,162,101	+				-0.4
3,162,571	+				+1.2
3,162,670	+				-0.9
3,162,673	+				-0.6
3,162,673	+				-1.7
3,162,673	+				-0.1
3,162,734	-				+0.9
3,162,759	+				+0.4
3,162,759	+				+1.1
3,162,760	-				+0.0
3,162,760	-				-0.5
3,162,760	-				-0.9
3,162,791	+				+0.9
3,162,791	+				-0.8
3,162,791	+				-2.9
3,162,791	+				+0.7
3,162,791	+				-0.2
3,162,791	+				-1.2
3,162,791	+				+1.7
3,162,791	+				-0.4
3,162,792	-				+0.1
3,162,792	-				-0.7
3,162,792	-				+1.1
3,162,792	-				+0.9
3,162,792	-				-2.2
3,162,792	-				-1.0
3,162,792	-				+0.5
3,162,792	-				-0.8
3,162,792	-				-1.1
3,162,869	+				-1.3
3,162,869	+				-0.5
3,162,869	+				-1.5
3,162,870	-				-1.0
3,162,870	-				-0.5
3,162,870	-				-1.5
3,162,870	-				-1.3
3,162,870	-				+0.1
3,162,894	-				-1.1
3,162,905	+				-1.2
3,162,905	+				-1.5
3,162,905	+				-1.6
3,162,905	+				-2.6
3,162,906	-				-1.1
3,162,906	-				-2.8
3,162,906	-				-2.5
3,162,937	+		AO353_14255	0.11	-0.9
3,162,937	+		AO353_14255	0.11	-1.9
3,162,938	-		AO353_14255	0.11	-1.1
3,162,938	-		AO353_14255	0.11	-0.1
3,162,967	-		AO353_14255	0.14	-3.2
3,163,008	-		AO353_14255	0.17	-0.9
3,163,016	+		AO353_14255	0.17	-0.9
3,163,016	+		AO353_14255	0.17	-3.2
3,163,016	+		AO353_14255	0.17	-0.5
3,163,016	+		AO353_14255	0.17	+0.4
3,163,016	+		AO353_14255	0.17	-0.5
3,163,016	+		AO353_14255	0.17	-1.7
3,163,016	+		AO353_14255	0.17	-0.9
3,163,016	+		AO353_14255	0.17	-0.0
3,163,016	+		AO353_14255	0.17	-1.2
3,163,017	-		AO353_14255	0.17	-0.9
3,163,017	-		AO353_14255	0.17	-1.1
3,163,017	-		AO353_14255	0.17	-1.7
3,163,017	-		AO353_14255	0.17	+0.7
3,163,017	-		AO353_14255	0.17	-2.1
3,163,017	-		AO353_14255	0.17	-1.3
3,163,022	+		AO353_14255	0.18	-1.5
3,163,022	+		AO353_14255	0.18	-2.2
3,163,022	+		AO353_14255	0.18	-1.5
3,163,022	+		AO353_14255	0.18	-0.6
3,163,022	+		AO353_14255	0.18	-1.7
3,163,022	+		AO353_14255	0.18	-1.9
3,163,022	+		AO353_14255	0.18	-0.2
3,163,022	+		AO353_14255	0.18	+0.1
3,163,023	-		AO353_14255	0.18	-1.4
3,163,023	-		AO353_14255	0.18	+0.1
3,163,023	-		AO353_14255	0.18	-2.2
3,163,023	-		AO353_14255	0.18	-1.2
3,163,023	-		AO353_14255	0.18	+0.7
3,163,023	-		AO353_14255	0.18	-1.9
3,163,168	-		AO353_14255	0.29	+2.7
3,163,168	-		AO353_14255	0.29	+1.9
3,163,395	+		AO353_14255	0.47	-0.5
3,163,395	+		AO353_14255	0.47	+0.5
3,163,396	-		AO353_14255	0.47	-2.7
3,163,396	-		AO353_14255	0.47	-1.3
3,163,625	+		AO353_14255	0.64	-1.6
3,163,625	+		AO353_14255	0.64	-1.1
3,163,626	-		AO353_14255	0.64	-1.6
3,163,636	+		AO353_14255	0.65	-0.8
3,163,636	+		AO353_14255	0.65	-1.9
3,163,636	+		AO353_14255	0.65	-0.5
3,163,636	+		AO353_14255	0.65	-1.3
3,163,636	+		AO353_14255	0.65	+0.4
3,163,636	+		AO353_14255	0.65	-0.5
3,163,637	-		AO353_14255	0.65	-1.9
3,163,637	-		AO353_14255	0.65	-1.7
3,163,637	-		AO353_14255	0.65	+1.7
3,163,665	+		AO353_14255	0.67	-0.5
3,163,666	-		AO353_14255	0.67	-2.0
3,163,755	-		AO353_14255	0.74	-0.5
3,163,755	-		AO353_14255	0.74	-0.6
3,163,799	+		AO353_14255	0.78	-1.0
3,163,799	+		AO353_14255	0.78	-1.9
3,163,799	+		AO353_14255	0.78	-1.8
3,163,799	+		AO353_14255	0.78	+1.1
3,163,799	+		AO353_14255	0.78	-2.2
3,163,799	+		AO353_14255	0.78	-3.0
3,163,799	+		AO353_14255	0.78	-1.7
3,163,799	+		AO353_14255	0.78	+0.1
3,163,799	+		AO353_14255	0.78	-0.2
3,163,799	+		AO353_14255	0.78	-0.7
3,163,799	+		AO353_14255	0.78	-0.9
3,163,800	-		AO353_14255	0.78	-2.1
3,163,800	-		AO353_14255	0.78	-1.7
3,163,800	-		AO353_14255	0.78	-1.6
3,163,800	-		AO353_14255	0.78	-1.9
3,163,800	-		AO353_14255	0.78	+0.5
3,163,800	-		AO353_14255	0.78	+0.4
3,163,800	-		AO353_14255	0.78	-0.9
3,163,800	-		AO353_14255	0.78	-3.3
3,163,895	+		AO353_14255	0.85	-2.5
3,163,895	+		AO353_14255	0.85	-1.7
3,163,895	+		AO353_14255	0.85	-1.1
3,163,895	+		AO353_14255	0.85	-1.5
3,163,895	+		AO353_14255	0.85	-1.8
3,163,895	+		AO353_14255	0.85	-3.3
3,163,895	+		AO353_14255	0.85	+2.1
3,163,895	+		AO353_14255	0.85	-0.1
3,163,895	+		AO353_14255	0.85	-0.9
3,163,895	+		AO353_14255	0.85	-1.2
3,163,895	+		AO353_14255	0.85	-0.7
3,163,895	+		AO353_14255	0.85	-1.4
3,163,895	+		AO353_14255	0.85	-1.7
3,163,895	+		AO353_14255	0.85	-2.2
3,163,895	+		AO353_14255	0.85	+0.5
3,163,896	-		AO353_14255	0.85	+0.1
3,163,896	-		AO353_14255	0.85	+0.1
3,163,896	-		AO353_14255	0.85	-0.9
3,163,896	-		AO353_14255	0.85	-1.3
3,163,896	-		AO353_14255	0.85	-1.2
3,163,896	-		AO353_14255	0.85	-0.2
3,163,896	-		AO353_14255	0.85	-2.2
3,163,896	-		AO353_14255	0.85	-1.8
3,163,896	-		AO353_14255	0.85	-1.7
3,163,896	-		AO353_14255	0.85	-1.5
3,163,896	-		AO353_14255	0.85	-0.8
3,163,896	-		AO353_14255	0.85	-1.7
3,163,896	-		AO353_14255	0.85	-1.6
3,163,896	-		AO353_14255	0.85	+0.3
3,163,896	-		AO353_14255	0.85	-1.7
3,163,896	-		AO353_14255	0.85	-2.7
3,163,896	-		AO353_14255	0.85	-1.7
3,163,896	-		AO353_14255	0.85	+1.4
3,163,945	+		AO353_14255	0.89	-2.8
3,163,945	+		AO353_14255	0.89	-0.9
3,163,945	+		AO353_14255	0.89	-2.3
3,163,945	+		AO353_14255	0.89	+1.9
3,163,945	+		AO353_14255	0.89	-0.9
3,163,945	+		AO353_14255	0.89	+0.1
3,163,945	+		AO353_14255	0.89	-0.5
3,163,946	-		AO353_14255	0.89	-0.8
3,163,946	-		AO353_14255	0.89	+0.5
3,163,946	-		AO353_14255	0.89	-1.1
3,163,946	-		AO353_14255	0.89	-0.5
3,163,946	-		AO353_14255	0.89	-1.3
3,163,946	-		AO353_14255	0.89	+0.1
3,163,946	-		AO353_14255	0.89	-1.1
3,163,946	-		AO353_14255	0.89	-0.7
3,163,946	-		AO353_14255	0.89	+0.5
3,163,946	-		AO353_14255	0.89	-0.5
3,163,946	-		AO353_14255	0.89	+0.1
3,164,023	-				-1.5
3,164,023	-				-2.1
3,164,076	+				+0.1
3,164,076	+				-0.5
3,164,076	+				-0.5
3,164,076	+				-3.1
3,164,076	+				+0.7
3,164,076	+				-1.1
3,164,076	+				-0.9
3,164,076	+				-1.1
3,164,076	+				+0.5
3,164,076	+				-1.6
3,164,077	-				+0.0
3,164,077	-				+1.1
3,164,077	-				+0.1
3,164,077	-				-0.1
3,164,077	-				-0.8
3,164,077	-				-0.9
3,164,077	-				-1.8
3,164,077	-				-1.6
3,164,077	-				-1.8
3,164,095	-				+0.1
3,164,095	-				-0.5
3,164,126	+				-0.5
3,164,127	-				-0.9
3,164,127	-				+0.8
3,164,152	+				-1.7
3,164,153	-				-0.9
3,164,153	-				-1.5
3,164,153	-				+0.3
3,164,162	+				-0.9
3,164,162	+				-0.8
3,164,162	+				-0.4
3,164,162	+				-1.5
3,164,163	-				+0.5
3,164,163	-				+2.1
3,164,163	-				+0.6
3,164,163	-				+0.0
3,164,169	+		AO353_14260	0.11	-0.1
3,164,169	+		AO353_14260	0.11	-1.7
3,164,169	+		AO353_14260	0.11	-0.9
3,164,169	+		AO353_14260	0.11	-0.2
3,164,169	+		AO353_14260	0.11	+0.0
3,164,169	+		AO353_14260	0.11	-0.9
3,164,169	+		AO353_14260	0.11	-1.2
3,164,169	+		AO353_14260	0.11	-2.4
3,164,169	+		AO353_14260	0.11	-3.2
3,164,170	-		AO353_14260	0.12	-0.3
3,164,170	-		AO353_14260	0.12	-0.1
3,164,209	+		AO353_14260	0.34	+1.1
3,164,276	+		AO353_14260	0.73	-2.0
3,164,276	+		AO353_14260	0.73	-0.8
3,164,276	+		AO353_14260	0.73	+0.6
3,164,276	+		AO353_14260	0.73	-2.3
3,164,276	+		AO353_14260	0.73	-0.9
3,164,276	+		AO353_14260	0.73	-2.2
3,164,276	+		AO353_14260	0.73	+1.1
3,164,276	+		AO353_14260	0.73	-1.2
3,164,276	+		AO353_14260	0.73	+0.6
3,164,277	-		AO353_14260	0.74	+0.3
3,164,277	-		AO353_14260	0.74	+0.6
3,164,277	-		AO353_14260	0.74	+1.1
3,164,277	-		AO353_14260	0.74	+0.7
3,164,277	-		AO353_14260	0.74	-0.5
3,164,340	+				-1.6
3,164,341	-				+0.4
3,164,350	+				-1.2
3,164,350	+				-2.3
3,164,350	+				-1.5
3,164,350	+				+0.7
3,164,350	+				-0.8
3,164,350	+				+0.4
3,164,350	+				-1.6
3,164,351	-				+0.1
3,164,351	-				+0.7
3,164,351	-				-0.7
3,164,351	-				+0.1
3,164,351	-				-2.1
3,164,351	-				+0.9
3,164,351	-				+0.4
3,164,351	-				+2.4
3,164,351	-				-0.7
3,164,351	-				-0.1
3,164,356	+				+0.2
3,164,356	+				-0.9
3,164,356	+				-0.2
3,164,356	+				-0.7
3,164,356	+				+0.7
3,164,356	+				-1.7
3,164,356	+				+0.1
3,164,356	+				-0.3
3,164,356	+				+0.5
3,164,356	+				-0.8
3,164,356	+				+1.4
3,164,356	+				-0.9
3,164,356	+				+1.0
3,164,356	+				+0.3
3,164,357	-				+0.4
3,164,357	-				+0.5
3,164,357	-				+0.1
3,164,357	-				+0.0
3,164,357	-				+0.8
3,164,357	-				-0.2
3,164,357	-				-0.1
3,164,357	-				-0.2
3,164,357	-				+0.1
3,164,357	-				-1.9
3,164,357	-				+1.9
3,164,357	-				+0.9
3,164,358	+				-1.1
3,164,358	+				-1.8
3,164,358	+				-1.2
3,164,358	+				-2.7
3,164,359	-				+1.1
3,164,359	-				+0.7
3,164,359	-				-0.5
3,164,365	+				-1.7
3,164,365	+				-1.3
3,164,365	+				-0.2
3,164,366	-				-0.9
3,164,366	-				+0.5
3,164,366	-				-0.3
3,164,538	+		AO353_14265	0.22	-2.2
3,164,538	+		AO353_14265	0.22	+0.4
3,164,538	+		AO353_14265	0.22	-0.9
3,164,539	-		AO353_14265	0.22	+0.3
3,164,539	-		AO353_14265	0.22	+1.1
3,164,539	-		AO353_14265	0.22	+0.3
3,164,643	+		AO353_14265	0.39	+0.5
3,164,643	+		AO353_14265	0.39	+0.4
3,164,644	-		AO353_14265	0.39	-0.5
3,164,644	-		AO353_14265	0.39	+0.4
3,164,644	-		AO353_14265	0.39	+1.1
3,164,644	-		AO353_14265	0.39	+0.4
3,164,644	-		AO353_14265	0.39	-0.3
3,164,644	-		AO353_14265	0.39	+0.3
3,164,644	-		AO353_14265	0.39	+1.4
3,164,648	-		AO353_14265	0.40	-0.0
3,164,704	+		AO353_14265	0.49	+0.3
3,164,704	+		AO353_14265	0.49	+0.1
3,164,704	+		AO353_14265	0.49	+0.1
3,164,705	-		AO353_14265	0.49	-1.2
3,164,705	-		AO353_14265	0.49	+0.5
3,164,850	-		AO353_14265	0.72	-0.8
3,164,850	-		AO353_14265	0.72	-0.7
3,164,850	-		AO353_14265	0.72	+2.8
3,164,850	-		AO353_14265	0.72	-0.9
3,165,009	+				-1.1
3,165,010	-				+0.1
3,165,025	+				-0.7
3,165,036	+				-1.3
3,165,036	+				+1.1