Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05430

Experiment: 1-ethyl-3-methylimidazolium chloride 170 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 170 mM
1,195,976	+				+0.0
1,195,976	+				+0.0
1,195,976	+				-0.5
1,195,976	+				-0.5
1,195,976	+				+0.0
1,195,977	-				+1.0
1,195,977	-				-0.3
1,195,977	-				-2.4
1,195,977	-				-2.1
1,195,977	-				-0.5
1,195,977	-				-2.0
1,195,977	-				-0.7
1,195,977	-				-2.5
1,195,984	-				-0.3
1,195,999	+				+0.3
1,195,999	+				-0.3
1,196,000	-				-1.0
1,196,052	+				-1.8
1,196,052	+				-1.0
1,196,053	-				-1.1
1,196,053	-				-2.4
1,196,083	+				+0.0
1,196,083	+				-2.7
1,196,083	+				-0.5
1,196,156	+				-0.5
1,196,156	+				+0.4
1,196,156	+				+0.7
1,196,156	+				-0.7
1,196,157	-				-1.3
1,196,157	-				-1.8
1,196,157	-				-0.8
1,196,157	-				-2.4
1,196,157	-				-1.5
1,196,195	+				-0.1
1,196,196	-				-1.5
1,196,196	-				-3.0
1,196,196	-				-3.9
1,196,196	-				+0.4
1,196,196	-				-2.5
1,196,196	-				+0.0
1,196,196	-				+0.0
1,196,196	-				+0.6
1,196,239	-				-0.5
1,196,239	-				+1.5
1,196,239	-				+0.4
1,196,330	+		AO353_05425	0.17	-1.2
1,196,331	-		AO353_05425	0.17	-2.0
1,196,331	-		AO353_05425	0.17	-0.5
1,196,331	-		AO353_05425	0.17	-1.1
1,196,512	-		AO353_05425	0.42	-1.0
1,196,585	+		AO353_05425	0.52	-2.9
1,196,585	+		AO353_05425	0.52	-0.4
1,196,585	+		AO353_05425	0.52	-1.0
1,196,585	+		AO353_05425	0.52	-0.0
1,196,585	+		AO353_05425	0.52	+1.6
1,196,585	+		AO353_05425	0.52	+0.0
1,196,585	+		AO353_05425	0.52	-1.5
1,196,585	+		AO353_05425	0.52	+0.5
1,196,585	+		AO353_05425	0.52	-1.5
1,196,586	-		AO353_05425	0.52	-1.8
1,196,586	-		AO353_05425	0.52	+0.0
1,196,586	-		AO353_05425	0.52	+0.2
1,196,859	+				-1.5
1,196,946	+				-1.5
1,196,946	+				+0.3
1,196,947	-				-0.7
1,196,947	-				-1.1
1,196,947	-				+0.5
1,196,962	+				-1.4
1,196,962	+				-1.5
1,196,962	+				-1.0
1,196,962	+				-0.8
1,196,962	+				+0.6
1,196,962	+				-2.7
1,196,962	+				-1.3
1,196,962	+				+0.0
1,196,963	-				-3.5
1,196,963	-				-0.1
1,196,963	-				-1.9
1,196,963	-				-1.5
1,196,963	-				-0.5
1,196,963	-				-1.0
1,196,963	-				-1.3
1,196,963	-				-2.4
1,196,963	-				-2.4
1,196,963	-				-0.8
1,196,963	-				+1.0
1,196,963	-				+0.3
1,196,963	-				-2.8
1,196,967	+				-1.5
1,196,967	+				-0.5
1,196,967	+				-1.3
1,196,967	+				-2.4
1,196,967	+				-2.0
1,196,967	+				-0.5
1,196,967	+				+0.2
1,196,967	+				-1.8
1,196,967	+				-1.0
1,196,967	+				-0.4
1,196,968	-				+0.6
1,196,968	-				-1.5
1,196,968	-				+1.0
1,196,968	-				-2.3
1,196,968	-				-1.0
1,196,970	+				-0.1
1,196,970	+				-0.3
1,196,970	+				-0.4
1,196,970	+				-1.0
1,196,970	+				-2.3
1,196,970	+				-3.0
1,196,970	+				+0.0
1,196,970	+				-0.6
1,196,970	+				-0.4
1,196,970	+				-0.3
1,196,971	-				-2.0
1,196,971	-				-0.7
1,196,971	-				-0.5
1,196,971	-				-1.8
1,196,971	-				-1.3
1,196,971	-				-1.2
1,196,973	+				-1.5
1,196,973	+				+0.5
1,196,973	+				-1.8
1,196,973	+				-1.7
1,196,974	-				-2.9
1,196,974	-				+2.0
1,196,974	-				-1.8
1,197,086	+		AO353_05430	0.15	-1.0
1,197,086	+		AO353_05430	0.15	-2.1
1,197,086	+		AO353_05430	0.15	-1.3
1,197,105	-		AO353_05430	0.17	-1.4
1,197,188	+		AO353_05430	0.27	-2.4
1,197,188	+		AO353_05430	0.27	-2.1
1,197,188	+		AO353_05430	0.27	+1.0
1,197,189	-		AO353_05430	0.27	-1.8
1,197,189	-		AO353_05430	0.27	-1.5
1,197,189	-		AO353_05430	0.27	-1.5
1,197,189	-		AO353_05430	0.27	-0.5
1,197,189	-		AO353_05430	0.27	+0.8
1,197,212	+		AO353_05430	0.29	-1.8
1,197,212	+		AO353_05430	0.29	+0.4
1,197,212	+		AO353_05430	0.29	-1.4
1,197,212	+		AO353_05430	0.29	-1.3
1,197,212	+		AO353_05430	0.29	-2.4
1,197,212	+		AO353_05430	0.29	-0.4
1,197,212	+		AO353_05430	0.29	+1.8
1,197,212	+		AO353_05430	0.29	-0.3
1,197,213	-		AO353_05430	0.29	-2.1
1,197,213	-		AO353_05430	0.29	+0.2
1,197,213	-		AO353_05430	0.29	+0.0
1,197,213	-		AO353_05430	0.29	-1.0
1,197,213	-		AO353_05430	0.29	+1.0
1,197,213	-		AO353_05430	0.29	-2.1
1,197,213	-		AO353_05430	0.29	-1.0
1,197,213	-		AO353_05430	0.29	+0.5
1,197,251	+		AO353_05430	0.34	-2.5
1,197,323	+		AO353_05430	0.42	-2.5
1,197,323	+		AO353_05430	0.42	-1.7
1,197,323	+		AO353_05430	0.42	+0.5
1,197,323	+		AO353_05430	0.42	-0.3
1,197,323	+		AO353_05430	0.42	-1.0
1,197,324	-		AO353_05430	0.42	-0.1
1,197,324	-		AO353_05430	0.42	-1.4
1,197,324	-		AO353_05430	0.42	-0.5
1,197,324	-		AO353_05430	0.42	-1.2
1,197,324	-		AO353_05430	0.42	-1.5
1,197,488	+		AO353_05430	0.60	-0.8
1,197,488	+		AO353_05430	0.60	+0.2
1,197,488	+		AO353_05430	0.60	+1.0
1,197,488	+		AO353_05430	0.60	-3.1
1,197,489	-		AO353_05430	0.60	+0.7
1,197,489	-		AO353_05430	0.60	-2.3
1,197,489	-		AO353_05430	0.60	-0.5
1,197,489	-		AO353_05430	0.60	-0.5
1,197,489	-		AO353_05430	0.60	-1.0
1,197,542	+		AO353_05430	0.66	-2.1
1,197,542	+		AO353_05430	0.66	-1.2
1,197,543	-		AO353_05430	0.66	+0.5
1,197,543	-		AO353_05430	0.66	-1.7
1,197,584	+		AO353_05430	0.71	-1.3
1,197,585	-		AO353_05430	0.71	-1.0
1,197,585	-		AO353_05430	0.71	-2.5
1,197,585	-		AO353_05430	0.71	-2.0
1,197,585	-		AO353_05430	0.71	-1.5
1,197,644	+		AO353_05430	0.78	-1.8
1,197,644	+		AO353_05430	0.78	+0.0
1,197,644	+		AO353_05430	0.78	-1.3
1,197,644	+		AO353_05430	0.78	-0.8
1,197,644	+		AO353_05430	0.78	-1.0
1,197,644	+		AO353_05430	0.78	-2.0
1,197,644	+		AO353_05430	0.78	-0.5
1,197,644	+		AO353_05430	0.78	-1.0
1,197,644	+		AO353_05430	0.78	-0.8
1,197,645	-		AO353_05430	0.78	-3.2
1,197,645	-		AO353_05430	0.78	-1.4
1,197,645	-		AO353_05430	0.78	-2.7
1,197,645	-		AO353_05430	0.78	-1.8
1,197,645	-		AO353_05430	0.78	-2.0
1,197,645	-		AO353_05430	0.78	-1.5
1,197,645	-		AO353_05430	0.78	-1.0
1,197,645	-		AO353_05430	0.78	+0.5
1,197,656	+		AO353_05430	0.79	-1.3
1,197,656	+		AO353_05430	0.79	-2.8
1,197,656	+		AO353_05430	0.79	+0.5
1,197,686	+		AO353_05430	0.82	+0.7
1,197,686	+		AO353_05430	0.82	+1.6
1,197,686	+		AO353_05430	0.82	-0.2
1,197,686	+		AO353_05430	0.82	+1.0
1,197,686	+		AO353_05430	0.82	-1.3
1,197,687	-		AO353_05430	0.82	-1.3
1,197,842	+				+2.0
1,197,842	+				-1.4
1,197,842	+				+1.0
1,197,842	+				-0.0
1,197,842	+				+1.0
1,197,842	+				-1.0
1,197,842	+				-1.3
1,197,842	+				+0.6
1,197,842	+				+0.0
1,197,843	-				+1.0
1,197,843	-				-1.5
1,197,843	-				-1.0
1,197,843	-				-0.5
1,197,843	-				-2.3
1,197,843	-				-2.1
1,197,843	-				+1.0
1,197,843	-				-0.5
1,197,843	-				+1.6
1,197,903	+				-1.8
1,197,903	+				-1.8
1,197,903	+				-1.8
1,197,904	-				-1.3
1,197,904	-				-2.8
1,198,071	+		AO353_05435	0.33	-2.3
1,198,071	+		AO353_05435	0.33	+2.0
1,198,072	-		AO353_05435	0.33	-0.7
1,198,072	-		AO353_05435	0.33	-1.0
1,198,085	+		AO353_05435	0.35	-1.3
1,198,086	-		AO353_05435	0.35	-0.3
1,198,134	+		AO353_05435	0.42	+0.0
1,198,135	-		AO353_05435	0.43	-0.5
1,198,142	+		AO353_05435	0.44	-2.4
1,198,142	+		AO353_05435	0.44	+0.1
1,198,142	+		AO353_05435	0.44	-1.7
1,198,142	+		AO353_05435	0.44	+0.0
1,198,143	-		AO353_05435	0.44	-1.5
1,198,165	+		AO353_05435	0.47	-0.7
1,198,172	+		AO353_05435	0.48	+0.0
1,198,172	+		AO353_05435	0.48	-0.5
1,198,172	+		AO353_05435	0.48	+0.0
1,198,172	+		AO353_05435	0.48	-1.4
1,198,172	+		AO353_05435	0.48	-0.3
1,198,172	+		AO353_05435	0.48	-1.4
1,198,173	-		AO353_05435	0.48	-1.0
1,198,263	+		AO353_05435	0.62	-0.8
1,198,263	+		AO353_05435	0.62	-1.9
1,198,263	+		AO353_05435	0.62	-1.7
1,198,264	-		AO353_05435	0.62	-2.0
1,198,297	-		AO353_05435	0.67	-1.1
1,198,399	+		AO353_05435	0.83	-0.8
1,198,399	+		AO353_05435	0.83	-1.3
1,198,399	+		AO353_05435	0.83	-0.1
1,198,399	+		AO353_05435	0.83	-2.0
1,198,399	+		AO353_05435	0.83	-0.5
1,198,400	-		AO353_05435	0.83	+0.2
1,198,400	-		AO353_05435	0.83	-0.5
1,198,400	-		AO353_05435	0.83	-1.5
1,198,400	-		AO353_05435	0.83	-2.4
1,198,400	-		AO353_05435	0.83	-1.5
1,198,732	-		AO353_05440	0.19	+0.0
1,198,732	-		AO353_05440	0.19	-1.9
1,198,736	+		AO353_05440	0.20	-1.3
1,198,737	-		AO353_05440	0.20	-1.1
1,198,737	-		AO353_05440	0.20	-1.4
1,198,737	-		AO353_05440	0.20	-1.8
1,198,737	-		AO353_05440	0.20	-2.4
1,198,753	+		AO353_05440	0.21	-1.4
1,198,754	-		AO353_05440	0.21	-2.5
1,198,754	-		AO353_05440	0.21	-0.5
1,198,754	-		AO353_05440	0.21	-0.5
1,198,754	-		AO353_05440	0.21	-1.5
1,198,754	-		AO353_05440	0.21	-2.3