Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3431

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
3,823,859	+		Pf1N1B4_3430	0.86	-1.7
3,823,859	+		Pf1N1B4_3430	0.86	-0.7
3,823,859	+		Pf1N1B4_3430	0.86	-2.1
3,823,859	+		Pf1N1B4_3430	0.86	-2.1
3,823,859	+		Pf1N1B4_3430	0.86	+1.5
3,823,859	+		Pf1N1B4_3430	0.86	-2.4
3,823,859	+		Pf1N1B4_3430	0.86	+0.5
3,823,859	+		Pf1N1B4_3430	0.86	+1.5
3,823,859	+		Pf1N1B4_3430	0.86	-1.6
3,823,859	+		Pf1N1B4_3430	0.86	-1.1
3,823,859	+		Pf1N1B4_3430	0.86	-1.2
3,823,859	+		Pf1N1B4_3430	0.86	-1.7
3,823,859	+		Pf1N1B4_3430	0.86	-0.7
3,823,860	-		Pf1N1B4_3430	0.86	+1.5
3,823,860	-		Pf1N1B4_3430	0.86	-1.1
3,823,860	-		Pf1N1B4_3430	0.86	-2.3
3,823,860	-		Pf1N1B4_3430	0.86	-0.1
3,823,860	-		Pf1N1B4_3430	0.86	-1.7
3,823,860	-		Pf1N1B4_3430	0.86	-2.7
3,823,860	-		Pf1N1B4_3430	0.86	-0.1
3,823,860	-		Pf1N1B4_3430	0.86	-1.1
3,823,860	-		Pf1N1B4_3430	0.86	-1.1
3,823,860	-		Pf1N1B4_3430	0.86	-1.4
3,823,860	-		Pf1N1B4_3430	0.86	-1.0
3,823,865	+		Pf1N1B4_3430	0.86	-2.9
3,823,865	+		Pf1N1B4_3430	0.86	-1.1
3,823,865	+				-0.1
3,823,866	-		Pf1N1B4_3430	0.86	-1.9
3,823,866	-		Pf1N1B4_3430	0.86	-1.9
3,824,034	+				-1.1
3,824,049	-				-1.7
3,824,066	-				-0.7
3,824,152	+				-0.9
3,824,360	-				-0.7
3,824,360	-				-1.1
3,824,360	-				-0.1
3,824,360	-				-0.3
3,824,360	-				-1.7
3,824,374	+				-0.1
3,824,374	+				+0.5
3,824,374	+				+0.6
3,824,375	-				-0.9
3,824,375	-				-1.7
3,824,375	-				+1.6
3,824,375	-				-0.3
3,824,375	-				-1.1
3,824,375	-				-0.3
3,824,375	-				+0.9
3,824,375	-				-0.1
3,824,375	-				-1.2
3,824,378	+				+0.3
3,824,378	+				+1.9
3,824,379	-				-0.1
3,824,379	-				-0.5
3,824,379	-				+0.1
3,824,379	-				-2.1
3,824,379	-				-0.2
3,824,379	-				-1.9
3,824,379	-				-1.1
3,824,379	-				+0.5
3,824,415	-				-0.8
3,824,415	-				-0.6
3,824,483	+				+0.9
3,824,484	-				-1.1
3,824,501	+				+0.3
3,824,502	-				-0.1
3,824,510	-				-0.7
3,824,510	-				-1.7
3,824,566	-				-1.1
3,824,568	-				-1.7
3,824,672	-				-1.7
3,824,692	+				-2.4
3,824,693	-				-1.4
3,824,693	-				-2.7
3,824,693	-				-1.9
3,824,693	-				-2.7
3,824,693	-				-2.7
3,824,693	-				-1.1
3,824,747	+				-0.1
3,824,747	+				-2.1
3,824,748	-				-4.0
3,824,748	-				-3.9
3,824,748	-				-1.8
3,824,786	-				-2.4
3,824,990	-		Pf1N1B4_3431	0.20	-2.7
3,824,990	-		Pf1N1B4_3431	0.20	-1.7
3,824,990	-		Pf1N1B4_3431	0.20	-1.1
3,825,157	+		Pf1N1B4_3431	0.41	-0.1
3,825,157	+		Pf1N1B4_3431	0.41	-0.9
3,825,157	+		Pf1N1B4_3431	0.41	-0.7
3,825,157	+		Pf1N1B4_3431	0.41	-0.7
3,825,158	-		Pf1N1B4_3431	0.41	-3.7
3,825,158	-		Pf1N1B4_3431	0.41	-2.7
3,825,158	-				-1.1
3,825,158	-				-2.1
3,825,160	+		Pf1N1B4_3431	0.41	-2.4
3,825,160	+		Pf1N1B4_3431	0.41	-2.1
3,825,160	+		Pf1N1B4_3431	0.41	-1.7
3,825,160	+		Pf1N1B4_3431	0.41	+0.5
3,825,160	+		Pf1N1B4_3431	0.41	-2.7
3,825,160	+		Pf1N1B4_3431	0.41	-3.3
3,825,160	+		Pf1N1B4_3431	0.41	-0.1
3,825,160	+		Pf1N1B4_3431	0.41	-2.9
3,825,160	+		Pf1N1B4_3431	0.41	-0.5
3,825,161	-		Pf1N1B4_3431	0.42	-4.3
3,825,161	-		Pf1N1B4_3431	0.42	-2.9
3,825,161	-		Pf1N1B4_3431	0.42	-0.1
3,825,161	-		Pf1N1B4_3431	0.42	-2.2
3,825,161	-		Pf1N1B4_3431	0.42	-1.7
3,825,161	-		Pf1N1B4_3431	0.42	-2.1
3,825,161	-		Pf1N1B4_3431	0.42	-2.4
3,825,161	-				-2.1
3,825,161	-		Pf1N1B4_3431	0.42	-1.1
3,825,161	-		Pf1N1B4_3431	0.42	-0.7
3,825,316	+		Pf1N1B4_3431	0.62	-1.7
3,825,317	-		Pf1N1B4_3431	0.62	-3.1
3,825,337	+		Pf1N1B4_3431	0.64	-1.4
3,825,338	-		Pf1N1B4_3431	0.64	-1.7
3,825,466	+		Pf1N1B4_3431	0.81	-2.4
3,825,466	+		Pf1N1B4_3431	0.81	-1.7
3,825,466	+		Pf1N1B4_3431	0.81	-1.4
3,825,466	+		Pf1N1B4_3431	0.81	-2.4
3,825,562	+				-1.1
3,825,562	+				+0.7
3,825,562	+				-1.1
3,825,562	+				+0.9
3,825,562	+				-1.1
3,825,562	+				-0.7
3,825,562	+				-2.9
3,825,563	-				-1.7
3,825,563	-				-1.4
3,825,563	-				-1.1
3,825,563	-				-2.7
3,825,563	-				-2.4
3,825,563	-				-0.1
3,825,583	+				-2.1
3,825,583	+				+0.2
3,825,583	+				-0.9
3,825,584	-				-1.3
3,825,584	-				-0.1
3,825,584	-				-2.7
3,825,584	-				-3.1
3,825,584	-				-3.4
3,825,601	+				+0.5
3,825,601	+				+1.3
3,825,601	+				+1.2
3,825,601	+				-2.9
3,825,601	+				+0.5
3,825,602	-				-0.1
3,825,610	+				-1.7
3,825,610	+				+0.5
3,825,610	+				+1.1
3,825,610	+				+1.9
3,825,610	+				-1.7
3,825,610	+				+0.5
3,825,611	-				+0.9
3,825,611	-				-1.1
3,825,611	-				-0.1
3,825,611	-				-0.1
3,825,611	-				-2.4
3,825,611	-				-0.1
3,825,611	-				-0.1
3,825,740	+				-0.9
3,825,856	+		Pf1N1B4_3432	0.22	-2.4
3,825,856	+		Pf1N1B4_3432	0.22	-1.3
3,825,857	-		Pf1N1B4_3432	0.22	-1.7
3,825,857	-		Pf1N1B4_3432	0.22	-2.4
3,825,857	-		Pf1N1B4_3432	0.22	-2.3
3,825,857	-		Pf1N1B4_3432	0.22	-1.9
3,825,910	+		Pf1N1B4_3432	0.30	+0.3
3,825,964	+		Pf1N1B4_3432	0.38	-1.4
3,825,964	+		Pf1N1B4_3432	0.38	-1.7
3,825,964	+		Pf1N1B4_3432	0.38	-0.7
3,825,964	+		Pf1N1B4_3432	0.38	-2.1
3,825,965	-		Pf1N1B4_3432	0.38	-2.7
3,825,965	-		Pf1N1B4_3432	0.38	-1.4
3,825,965	-		Pf1N1B4_3432	0.38	-1.7
3,825,965	-		Pf1N1B4_3432	0.38	-0.9
3,825,965	-		Pf1N1B4_3432	0.38	-2.1
3,825,965	-		Pf1N1B4_3432	0.38	-2.7
3,825,965	-		Pf1N1B4_3432	0.38	-2.3
3,825,965	-		Pf1N1B4_3432	0.38	-5.3
3,825,965	-		Pf1N1B4_3432	0.38	-1.1
3,825,965	-		Pf1N1B4_3432	0.38	-1.7
3,825,965	-		Pf1N1B4_3432	0.38	-0.5
3,825,965	-		Pf1N1B4_3432	0.38	-2.4
3,825,965	-		Pf1N1B4_3432	0.38	-1.7
3,826,024	+		Pf1N1B4_3432	0.47	-2.1
3,826,024	+		Pf1N1B4_3432	0.47	-1.6
3,826,024	+		Pf1N1B4_3432	0.47	-0.1
3,826,024	+		Pf1N1B4_3432	0.47	-0.6
3,826,025	-		Pf1N1B4_3432	0.47	-1.1
3,826,025	-		Pf1N1B4_3432	0.47	-0.7
3,826,025	-		Pf1N1B4_3432	0.47	-2.4
3,826,025	-		Pf1N1B4_3432	0.47	-2.1
3,826,306	+		Pf1N1B4_3432	0.87	-2.1
3,826,306	+		Pf1N1B4_3432	0.87	-1.1
3,826,307	-		Pf1N1B4_3432	0.88	-3.1
3,826,307	-		Pf1N1B4_3432	0.88	-1.1
3,826,307	-		Pf1N1B4_3432	0.88	-2.1
3,826,374	-				-0.1
3,826,388	+				-1.1
3,826,388	+				-1.5
3,826,388	+				-1.9
3,826,388	+				+1.5
3,826,388	+				-1.1
3,826,388	+				-1.7
3,826,388	+				-1.7
3,826,388	+				-1.7
3,826,388	+				-2.7
3,826,388	+				-2.3
3,826,388	+				-0.1
3,826,388	+				+0.5
3,826,388	+				-0.1
3,826,389	-				-3.4
3,826,389	-				-2.4
3,826,389	-				-0.1
3,826,389	-				-2.1
3,826,389	-				-0.7
3,826,401	+				-1.7
3,826,401	+				-1.1
3,826,401	+				-2.9
3,826,402	-				-2.4
3,826,402	-				-2.1
3,826,402	-				-2.3
3,826,402	-				-0.7
3,826,566	+		Pf1N1B4_3433	0.25	-0.1
3,826,566	+		Pf1N1B4_3433	0.25	-2.1
3,826,566	+		Pf1N1B4_3433	0.25	-1.1
3,826,567	-		Pf1N1B4_3433	0.25	-2.9
3,826,567	-		Pf1N1B4_3433	0.25	-0.1
3,826,567	-		Pf1N1B4_3433	0.25	-1.1
3,826,611	+		Pf1N1B4_3433	0.32	-0.1
3,826,611	+		Pf1N1B4_3433	0.32	-3.1
3,826,612	-				-0.1