Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2016

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
2,301,434	+		Pf1N1B4_2014	0.88	-1.3
2,301,511	+				+0.3
2,301,511	+				+0.1
2,301,511	+				-1.1
2,301,512	-				+0.7
2,301,512	-				+1.1
2,301,512	-				-1.0
2,301,579	+				-0.7
2,301,579	+				-0.3
2,301,579	+				+0.3
2,301,579	+				-1.3
2,301,579	+				-0.7
2,301,580	-				-2.0
2,301,601	+				+0.6
2,301,601	+				+0.7
2,301,602	-				+0.9
2,301,602	-				-0.7
2,301,602	-				-0.7
2,301,632	-				+0.3
2,301,632	-				+0.3
2,301,840	+		Pf1N1B4_2015	0.30	-1.3
2,301,840	+		Pf1N1B4_2015	0.30	+1.2
2,301,841	-		Pf1N1B4_2015	0.30	-0.2
2,301,841	-		Pf1N1B4_2015	0.30	-0.5
2,301,921	+		Pf1N1B4_2015	0.42	+0.1
2,302,071	+		Pf1N1B4_2015	0.64	-0.4
2,302,071	+		Pf1N1B4_2015	0.64	+1.7
2,302,072	-		Pf1N1B4_2015	0.64	+1.7
2,302,072	-		Pf1N1B4_2015	0.64	-1.3
2,302,149	+		Pf1N1B4_2015	0.76	+0.3
2,302,149	+		Pf1N1B4_2015	0.76	-0.8
2,302,150	-		Pf1N1B4_2015	0.76	-0.1
2,302,328	+				+1.3
2,302,329	-				-0.8
2,302,329	-				-0.5
2,302,329	-				+0.7
2,302,329	-				-0.7
2,302,329	-				-0.2
2,302,329	-				-0.3
2,302,329	-				+0.9
2,302,329	-				+0.5
2,302,330	+				+0.1
2,302,330	+				+0.9
2,302,330	+				-0.7
2,302,330	+				-0.3
2,302,331	-				+0.3
2,302,331	-				-0.6
2,302,331	-				+0.9
2,302,331	-				+0.3
2,302,331	-				+0.3
2,302,331	-				-0.7
2,302,331	-				-0.9
2,302,331	-				+0.3
2,302,331	-				-0.4
2,302,379	+		Pf1N1B4_2016	0.12	+0.8
2,302,380	-		Pf1N1B4_2016	0.12	-0.4
2,302,380	-		Pf1N1B4_2016	0.12	+0.9
2,302,380	-		Pf1N1B4_2016	0.12	+0.1
2,302,458	-		Pf1N1B4_2016	0.29	+0.1
2,302,458	-		Pf1N1B4_2016	0.29	+0.0
2,302,529	+		Pf1N1B4_2016	0.45	+1.1
2,302,530	-		Pf1N1B4_2016	0.45	+1.1
2,302,530	-		Pf1N1B4_2016	0.45	+0.6
2,302,530	-		Pf1N1B4_2016	0.45	+0.4
2,302,565	+		Pf1N1B4_2016	0.53	-0.3
2,302,565	+		Pf1N1B4_2016	0.53	-0.1
2,302,565	+		Pf1N1B4_2016	0.53	-1.3
2,302,566	-		Pf1N1B4_2016	0.53	+0.3
2,302,566	-		Pf1N1B4_2016	0.53	-0.7
2,302,566	-		Pf1N1B4_2016	0.53	-0.4
2,302,691	+		Pf1N1B4_2016	0.81	-2.0
2,302,691	+		Pf1N1B4_2016	0.81	-0.0
2,302,691	+		Pf1N1B4_2016	0.81	+0.7
2,302,691	+		Pf1N1B4_2016	0.81	-0.2
2,302,691	+		Pf1N1B4_2016	0.81	-0.3
2,302,691	+		Pf1N1B4_2016	0.81	-0.8
2,302,691	+		Pf1N1B4_2016	0.81	+0.5
2,302,692	-		Pf1N1B4_2016	0.82	-2.3
2,302,692	-		Pf1N1B4_2016	0.82	+0.6
2,302,692	-		Pf1N1B4_2016	0.82	+0.3
2,302,703	+		Pf1N1B4_2016	0.84	+1.3
2,302,703	+		Pf1N1B4_2016	0.84	+1.5
2,302,703	+		Pf1N1B4_2016	0.84	+0.7
2,302,703	+		Pf1N1B4_2016	0.84	-0.0
2,302,704	-		Pf1N1B4_2016	0.84	+0.3
2,302,704	-		Pf1N1B4_2016	0.84	+1.3
2,302,704	-		Pf1N1B4_2016	0.84	+0.3
2,302,784	+				-0.1
2,302,869	+		Pf1N1B4_2017	0.14	-1.0
2,302,870	-		Pf1N1B4_2017	0.14	-0.3
2,302,954	-		Pf1N1B4_2017	0.27	+0.3
2,302,955	+		Pf1N1B4_2017	0.28	-0.3
2,302,955	+		Pf1N1B4_2017	0.28	-0.3
2,302,955	+		Pf1N1B4_2017	0.28	+0.3
2,302,955	+		Pf1N1B4_2017	0.28	+0.7
2,302,956	-		Pf1N1B4_2017	0.28	-2.3
2,302,956	-		Pf1N1B4_2017	0.28	+0.0
2,302,956	-		Pf1N1B4_2017	0.28	+0.8
2,302,956	-		Pf1N1B4_2017	0.28	-0.0
2,302,956	-		Pf1N1B4_2017	0.28	+0.1
2,302,956	-		Pf1N1B4_2017	0.28	-0.7
2,302,956	-		Pf1N1B4_2017	0.28	+0.9
2,302,956	-		Pf1N1B4_2017	0.28	+0.3
2,302,956	-		Pf1N1B4_2017	0.28	-2.3
2,303,093	+		Pf1N1B4_2017	0.50	+0.3
2,303,093	+		Pf1N1B4_2017	0.50	+0.9
2,303,093	+		Pf1N1B4_2017	0.50	-0.7
2,303,093	+		Pf1N1B4_2017	0.50	+0.9
2,303,093	+		Pf1N1B4_2017	0.50	-0.7
2,303,093	+		Pf1N1B4_2017	0.50	+0.0
2,303,093	+		Pf1N1B4_2017	0.50	+1.1
2,303,093	+		Pf1N1B4_2017	0.50	-0.3
2,303,093	+		Pf1N1B4_2017	0.50	+0.3
2,303,093	+		Pf1N1B4_2017	0.50	-1.3
2,303,093	+		Pf1N1B4_2017	0.50	+0.9
2,303,093	+		Pf1N1B4_2017	0.50	+0.3
2,303,093	+		Pf1N1B4_2017	0.50	+0.3
2,303,093	+		Pf1N1B4_2017	0.50	-0.7
2,303,093	+		Pf1N1B4_2017	0.50	+0.9
2,303,093	+		Pf1N1B4_2017	0.50	+1.3
2,303,094	-		Pf1N1B4_2017	0.50	-0.3
2,303,094	-		Pf1N1B4_2017	0.50	-1.1
2,303,094	-		Pf1N1B4_2017	0.50	-1.2
2,303,094	-		Pf1N1B4_2017	0.50	-0.8
2,303,094	-		Pf1N1B4_2017	0.50	-1.1
2,303,094	-		Pf1N1B4_2017	0.50	+0.3
2,303,094	-		Pf1N1B4_2017	0.50	+0.3
2,303,094	-		Pf1N1B4_2017	0.50	-0.1
2,303,094	-		Pf1N1B4_2017	0.50	-1.0
2,303,094	-		Pf1N1B4_2017	0.50	-0.1
2,303,094	-		Pf1N1B4_2017	0.50	+0.3
2,303,094	-		Pf1N1B4_2017	0.50	+0.3
2,303,094	-		Pf1N1B4_2017	0.50	+0.0
2,303,094	-		Pf1N1B4_2017	0.50	+0.3
2,303,138	+		Pf1N1B4_2017	0.57	+0.3
2,303,156	+		Pf1N1B4_2017	0.60	-0.7
2,303,156	+		Pf1N1B4_2017	0.60	-2.7
2,303,156	+		Pf1N1B4_2017	0.60	-1.0
2,303,156	+		Pf1N1B4_2017	0.60	+1.9
2,303,156	+		Pf1N1B4_2017	0.60	+1.9
2,303,157	-		Pf1N1B4_2017	0.60	-1.0
2,303,157	-		Pf1N1B4_2017	0.60	-1.1
2,303,157	-		Pf1N1B4_2017	0.60	-0.2
2,303,176	+		Pf1N1B4_2017	0.63	+0.3
2,303,176	+		Pf1N1B4_2017	0.63	+0.3
2,303,177	-		Pf1N1B4_2017	0.63	-0.0
2,303,177	-		Pf1N1B4_2017	0.63	+0.6
2,303,177	-		Pf1N1B4_2017	0.63	-0.1
2,303,177	-		Pf1N1B4_2017	0.63	+0.7
2,303,400	+				+1.3
2,303,400	+				+0.3
2,303,400	+				-0.2
2,303,400	+				-0.6
2,303,400	+				+1.1
2,303,401	-				-0.7
2,303,401	-				+0.3
2,303,401	-				+1.1
2,303,401	-				-2.0
2,303,402	+				-0.7
2,303,402	+				+0.3
2,303,402	+				+0.1
2,303,402	+				-2.5
2,303,402	+				-0.1
2,303,402	+				-0.4
2,303,402	+				-0.0
2,303,402	+				-1.3
2,303,402	+				+0.3
2,303,402	+				+0.3
2,303,402	+				+2.6
2,303,402	+				-0.5
2,303,402	+				+0.3
2,303,402	+				-1.7
2,303,402	+				-1.7
2,303,402	+				-0.7
2,303,402	+				+1.1
2,303,402	+				+0.8
2,303,402	+				-1.0
2,303,403	-				-0.7
2,303,403	-				+2.6
2,303,403	-				+0.3
2,303,403	-				+1.3
2,303,403	-				+1.1
2,303,403	-				-1.0
2,303,403	-				+0.7
2,303,403	-				-0.3
2,303,403	-				+2.5
2,303,403	-				+0.9
2,303,403	-				-0.7
2,303,403	-				-2.0
2,303,403	-				-0.8
2,303,403	-				+1.9
2,303,403	-				-0.3
2,303,403	-				-2.3
2,303,403	-				+1.3
2,303,403	-				-1.0
2,303,403	-				-0.7
2,303,403	-				+0.3
2,303,403	-				+2.3
2,303,412	+				-0.7
2,303,412	+				+0.3
2,303,412	+				-0.4
2,303,412	+				-0.7
2,303,437	+				-1.1
2,303,437	+				+0.2
2,303,437	+				+2.1
2,303,438	-				+0.6
2,303,438	-				-2.0
2,303,438	-				+3.3
2,303,438	-				+1.3
2,303,447	-				+0.0
2,303,459	+				+0.3
2,303,460	-				-1.3
2,303,460	-				-0.4
2,303,460	-				+0.5
2,303,460	-				-0.2
2,303,460	-				-0.3
2,303,460	-				-2.3
2,303,485	-				+0.5
2,303,578	+				+0.4
2,303,578	+				+0.3
2,303,579	-				+1.5
2,303,579	-				-1.0
2,303,579	-				-0.7
2,303,579	-				+0.9
2,303,695	+		Pf1N1B4_2018	0.13	-1.0
2,303,707	+		Pf1N1B4_2018	0.14	+0.6
2,303,707	+		Pf1N1B4_2018	0.14	-0.2
2,303,708	-		Pf1N1B4_2018	0.14	+0.7
2,303,749	+		Pf1N1B4_2018	0.16	+0.7
2,303,749	+		Pf1N1B4_2018	0.16	+0.3
2,303,749	+		Pf1N1B4_2018	0.16	+1.1
2,303,749	+		Pf1N1B4_2018	0.16	+1.5
2,303,749	+		Pf1N1B4_2018	0.16	+0.3
2,303,749	+		Pf1N1B4_2018	0.16	+0.3
2,303,749	+		Pf1N1B4_2018	0.16	+1.5
2,303,749	+		Pf1N1B4_2018	0.16	-0.7
2,303,749	+		Pf1N1B4_2018	0.16	+0.3
2,303,749	+		Pf1N1B4_2018	0.16	+1.3
2,303,749	+		Pf1N1B4_2018	0.16	+0.9
2,303,749	+		Pf1N1B4_2018	0.16	-0.7
2,303,749	+		Pf1N1B4_2018	0.16	+0.9
2,303,749	+		Pf1N1B4_2018	0.16	-1.3
2,303,749	+		Pf1N1B4_2018	0.16	+0.7
2,303,749	+		Pf1N1B4_2018	0.16	+1.3
2,303,749	+		Pf1N1B4_2018	0.16	+0.3
2,303,749	+		Pf1N1B4_2018	0.16	-2.5
2,303,749	+		Pf1N1B4_2018	0.16	+0.6
2,303,750	-		Pf1N1B4_2018	0.16	+0.3
2,303,750	-				+0.3
2,303,750	-		Pf1N1B4_2018	0.16	-0.1
2,303,750	-		Pf1N1B4_2018	0.16	+0.1
2,303,750	-		Pf1N1B4_2018	0.16	-0.5