Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29495

Experiment: Temperature shift 10_to_34; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Temperature shift 10_to_34; with MOPS
6,546,693	+		PFLU_RS29485	0.90	-0.9
6,546,694	-				+0.4
6,546,694	-				+0.0
6,546,694	-				+0.1
6,546,694	-				+0.1
6,546,694	-				-0.8
6,546,703	+				-2.2
6,546,703	+				-1.7
6,546,703	+				-2.5
6,546,704	-				+0.2
6,546,704	-				+0.2
6,546,940	+		PFLU_RS29490	0.26	+0.5
6,546,940	+		PFLU_RS29490	0.26	-0.6
6,546,940	+		PFLU_RS29490	0.26	+1.4
6,546,941	-		PFLU_RS29490	0.26	-0.5
6,546,970	+		PFLU_RS29490	0.30	-0.5
6,546,970	+		PFLU_RS29490	0.30	+1.2
6,546,970	+		PFLU_RS29490	0.30	-0.9
6,546,970	+		PFLU_RS29490	0.30	+0.3
6,546,970	+		PFLU_RS29490	0.30	-0.3
6,546,970	+		PFLU_RS29490	0.30	+1.0
6,546,970	+		PFLU_RS29490	0.30	-2.0
6,546,970	+		PFLU_RS29490	0.30	-2.1
6,546,970	+		PFLU_RS29490	0.30	+0.4
6,546,970	+		PFLU_RS29490	0.30	-1.7
6,546,970	+		PFLU_RS29490	0.30	-0.3
6,546,970	+		PFLU_RS29490	0.30	-0.3
6,546,970	+		PFLU_RS29490	0.30	+0.8
6,546,970	+		PFLU_RS29490	0.30	+0.2
6,546,970	+		PFLU_RS29490	0.30	+0.2
6,546,971	-		PFLU_RS29490	0.30	+0.7
6,546,971	-		PFLU_RS29490	0.30	-1.0
6,546,971	-		PFLU_RS29490	0.30	-0.5
6,546,971	-		PFLU_RS29490	0.30	+0.1
6,546,971	-		PFLU_RS29490	0.30	-1.2
6,546,971	-		PFLU_RS29490	0.30	-1.9
6,546,971	-		PFLU_RS29490	0.30	-0.3
6,546,971	-		PFLU_RS29490	0.30	+0.3
6,546,971	-		PFLU_RS29490	0.30	-1.0
6,546,971	-		PFLU_RS29490	0.30	-2.9
6,546,971	-		PFLU_RS29490	0.30	-1.6
6,546,971	-		PFLU_RS29490	0.30	+0.4
6,546,971	-		PFLU_RS29490	0.30	+2.6
6,546,971	-		PFLU_RS29490	0.30	-1.3
6,546,971	-		PFLU_RS29490	0.30	-0.6
6,546,971	-		PFLU_RS29490	0.30	-0.3
6,546,971	-		PFLU_RS29490	0.30	-0.6
6,546,979	-		PFLU_RS29490	0.31	-1.6
6,546,979	-		PFLU_RS29490	0.31	-2.9
6,547,135	+		PFLU_RS29490	0.53	+0.9
6,547,135	+		PFLU_RS29490	0.53	-0.6
6,547,135	+		PFLU_RS29490	0.53	+0.1
6,547,135	+		PFLU_RS29490	0.53	-1.3
6,547,135	+		PFLU_RS29490	0.53	+2.0
6,547,136	-		PFLU_RS29490	0.53	+0.7
6,547,136	-		PFLU_RS29490	0.53	-0.3
6,547,136	-		PFLU_RS29490	0.53	+0.7
6,547,136	-		PFLU_RS29490	0.53	+0.2
6,547,136	-		PFLU_RS29490	0.53	-0.3
6,547,136	-		PFLU_RS29490	0.53	-1.3
6,547,253	+		PFLU_RS29490	0.69	-0.8
6,547,253	+		PFLU_RS29490	0.69	+0.8
6,547,253	+		PFLU_RS29490	0.69	+1.0
6,547,254	-		PFLU_RS29490	0.69	-1.5
6,547,285	+		PFLU_RS29490	0.74	-0.8
6,547,320	-		PFLU_RS29490	0.78	-1.7
6,547,361	+		PFLU_RS29490	0.84	+0.4
6,547,361	+		PFLU_RS29490	0.84	-0.6
6,547,361	+		PFLU_RS29490	0.84	+0.5
6,547,361	+		PFLU_RS29490	0.84	-0.6
6,547,361	+		PFLU_RS29490	0.84	-0.8
6,547,362	-		PFLU_RS29490	0.84	-0.3
6,547,362	-		PFLU_RS29490	0.84	-0.6
6,547,389	+		PFLU_RS29490	0.88	+1.2
6,547,389	+		PFLU_RS29490	0.88	+0.7
6,547,390	-		PFLU_RS29490	0.88	-1.0
6,547,390	-		PFLU_RS29490	0.88	+0.2
6,547,390	-		PFLU_RS29490	0.88	-1.3
6,547,414	+				+0.4
6,547,414	+				+1.4
6,547,414	+				-2.9
6,547,414	+				-1.7
6,547,414	+				+0.1
6,547,414	+				-0.9
6,547,414	+				-1.1
6,547,414	+				+0.8
6,547,414	+				+0.2
6,547,414	+				-0.8
6,547,414	+				-1.2
6,547,414	+				-2.2
6,547,414	+				-1.8
6,547,415	-				-1.0
6,547,415	-				-0.7
6,547,415	-				-2.0
6,547,415	-				-0.5
6,547,415	-				-0.6
6,547,415	-				-1.3
6,547,475	+				-0.5
6,547,476	-				-0.5
6,547,476	-				-0.9
6,547,476	-				-0.6
6,547,489	+				+0.7
6,547,489	+				-1.0
6,547,490	-				+0.7
6,547,516	+				-0.6
6,547,516	+				+1.0
6,547,516	+				-0.7
6,547,516	+				-0.6
6,547,517	-				+0.3
6,547,517	-				+0.3
6,547,517	-				-0.8
6,547,517	-				-1.3
6,547,517	-				+0.9
6,547,517	-				-3.2
6,547,517	-				-0.9
6,547,518	+				+1.0
6,547,518	+				+0.1
6,547,518	+				+0.6
6,547,518	+				+1.0
6,547,518	+				+1.7
6,547,518	+				+0.3
6,547,518	+				-0.5
6,547,518	+				+0.6
6,547,518	+				-1.8
6,547,518	+				+0.1
6,547,518	+				+1.0
6,547,518	+				+1.2
6,547,518	+				-1.8
6,547,518	+				+0.4
6,547,518	+				+0.1
6,547,518	+				+0.8
6,547,519	-				-0.2
6,547,519	-				-1.6
6,547,519	-				-0.4
6,547,519	-				+0.1
6,547,519	-				+1.0
6,547,519	-				+0.1
6,547,519	-				+0.4
6,547,519	-				+0.1
6,547,547	+				+0.4
6,547,547	+				+1.0
6,547,548	-				+0.6
6,547,561	-				-2.1
6,547,598	+				+2.3
6,547,599	-				-1.2
6,547,599	-				-0.0
6,547,616	+				+0.4
6,547,616	+				+0.4
6,547,616	+				+0.4
6,547,617	-				-0.7
6,547,654	+				+0.2
6,547,654	+				+0.7
6,547,654	+				-1.4
6,547,654	+				+1.0
6,547,654	+				-1.3
6,547,654	+				-1.2
6,547,654	+				-1.1
6,547,654	+				+2.3
6,547,654	+				+0.1
6,547,654	+				+0.7
6,547,655	-				+0.5
6,547,655	-				+1.5
6,547,655	-				-1.2
6,547,655	-				+0.3
6,547,707	+				-0.1
6,547,707	+				-0.5
6,547,707	+				+0.6
6,547,707	+				-0.5
6,547,707	+				-0.7
6,547,708	-				-0.6
6,547,708	-				+0.2
6,547,708	-				-0.1
6,547,752	-		PFLU_RS29495	0.11	+1.0
6,547,865	-		PFLU_RS29495	0.24	-1.5
6,548,004	+		PFLU_RS29495	0.40	+0.0
6,548,005	-		PFLU_RS29495	0.40	+1.0
6,548,005	-		PFLU_RS29495	0.40	+0.4
6,548,005	-		PFLU_RS29495	0.40	+2.4
6,548,280	+		PFLU_RS29495	0.72	-0.5
6,548,280	+		PFLU_RS29495	0.72	-0.6
6,548,280	+		PFLU_RS29495	0.72	+1.0
6,548,281	-		PFLU_RS29495	0.72	-1.2
6,548,281	-		PFLU_RS29495	0.72	+1.0
6,548,281	-		PFLU_RS29495	0.72	+0.9
6,548,422	+		PFLU_RS29495	0.88	-0.9
6,548,422	+		PFLU_RS29495	0.88	-0.3
6,548,422	+		PFLU_RS29495	0.88	+0.4
6,548,422	+		PFLU_RS29495	0.88	-0.2
6,548,423	-		PFLU_RS29495	0.88	+1.0
6,548,423	-		PFLU_RS29495	0.88	-0.6
6,548,423	-		PFLU_RS29495	0.88	+0.4
6,548,423	-		PFLU_RS29495	0.88	-0.6
6,548,423	-		PFLU_RS29495	0.88	-0.8
6,548,423	-		PFLU_RS29495	0.88	-1.9
6,548,423	-		PFLU_RS29495	0.88	+1.7
6,548,508	+				-0.5
6,548,508	+				+1.5
6,548,508	+				-0.3
6,548,508	+				-0.4
6,548,509	-				+0.1
6,548,509	-				-0.2
6,548,509	-				-0.3
6,548,509	-				-0.2
6,548,515	+				+0.0
6,548,515	+				-0.3
6,548,522	+				-0.1
6,549,133	+				-2.5
6,549,187	+				+0.2
6,549,187	+				-0.1
6,549,187	+				-0.8
6,549,188	-				+0.2
6,549,188	-				+0.8
6,549,188	-				+0.5
6,549,188	-				-0.7
6,549,188	-				+0.1
6,549,188	-				+0.7
6,549,188	-				+0.7
6,549,268	+				+0.7
6,549,269	-				+2.0
6,549,319	+				+1.4
6,549,319	+				+1.4
6,549,319	+				-0.3
6,549,319	+				-0.8
6,549,319	+				+1.0
6,549,319	+				-1.2
6,549,319	+				+0.2
6,549,319	+				-0.8
6,549,320	-				+1.0
6,549,320	-				+2.0
6,549,351	+		PFLU_RS29505	0.11	+1.4
6,549,351	+		PFLU_RS29505	0.11	+0.4
6,549,351	+		PFLU_RS29505	0.11	+2.4
6,549,351	+		PFLU_RS29505	0.11	+1.6
6,549,351	+		PFLU_RS29505	0.11	+1.2
6,549,351	+		PFLU_RS29505	0.11	+0.5
6,549,351	+		PFLU_RS29505	0.11	-0.6
6,549,391	+		PFLU_RS29505	0.26	+2.0
6,549,460	+		PFLU_RS29505	0.52	-1.6
6,549,460	+		PFLU_RS29505	0.52	-0.9
6,549,460	+		PFLU_RS29505	0.52	-0.3
6,549,468	+		PFLU_RS29505	0.55	+0.5
6,549,468	+		PFLU_RS29505	0.55	+0.0
6,549,503	+		PFLU_RS29505	0.68	+0.4
6,549,503	+		PFLU_RS29505	0.68	-1.2
6,549,503	+		PFLU_RS29505	0.68	+1.0
6,549,503	+		PFLU_RS29505	0.68	+3.6
6,549,503	+		PFLU_RS29505	0.68	+0.8
6,549,504	-		PFLU_RS29505	0.69	+1.0