Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS09005

Experiment: Iron limitation (0.2x), formate media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Iron limitation (0.2x), formate media
1,659,752	-				+1.0
1,659,752	-				+1.1
1,659,752	-				-4.5
1,659,753	+				-4.2
1,659,753	+				+0.9
1,659,754	-				+1.9
1,659,754	-				+1.1
1,659,754	-				+1.6
1,659,754	-				+1.4
1,659,754	-				+0.4
1,659,755	+				+0.5
1,659,755	+				+1.2
1,659,755	+				+0.1
1,659,755	+				+1.5
1,659,755	+				+0.8
1,659,764	-				+1.3
1,659,764	-				+0.2
1,659,764	-				+0.4
1,659,764	-				+1.2
1,659,765	+				-4.4
1,659,765	+				+0.8
1,659,765	+				-2.7
1,659,766	-				-4.1
1,659,766	-				+0.8
1,659,766	-				-2.6
1,659,767	+				+1.4
1,659,767	+				+1.3
1,659,767	+				+2.4
1,659,767	+				+1.2
1,659,773	+				+0.9
1,659,804	-		MMJJ_RS09000	0.10	+1.1
1,659,805	+		MMJJ_RS09000	0.10	-3.3
1,659,805	+		MMJJ_RS09000	0.10	+0.9
1,659,808	+		MMJJ_RS09000	0.11	-2.0
1,659,808	+		MMJJ_RS09000	0.11	+1.8
1,659,808	+		MMJJ_RS09000	0.11	+0.5
1,659,808	+		MMJJ_RS09000	0.11	+1.7
1,659,837	+		MMJJ_RS09000	0.14	+2.0
1,659,844	-		MMJJ_RS09000	0.14	+1.7
1,659,844	-		MMJJ_RS09000	0.14	+0.8
1,659,845	+		MMJJ_RS09000	0.14	+1.0
1,659,845	+		MMJJ_RS09000	0.14	+0.4
1,659,845	+		MMJJ_RS09000	0.14	-2.2
1,659,845	+		MMJJ_RS09000	0.14	+0.5
1,659,845	+		MMJJ_RS09000	0.14	+0.5
1,659,845	+		MMJJ_RS09000	0.14	+1.7
1,659,845	+		MMJJ_RS09000	0.14	+1.6
1,659,850	-		MMJJ_RS09000	0.15	+0.6
1,659,851	+		MMJJ_RS09000	0.15	+1.1
1,659,851	+		MMJJ_RS09000	0.15	+1.9
1,659,854	-		MMJJ_RS09000	0.15	+1.5
1,659,855	+		MMJJ_RS09000	0.15	-0.7
1,659,856	-		MMJJ_RS09000	0.15	+1.3
1,659,884	-		MMJJ_RS09000	0.18	+1.7
1,659,884	-		MMJJ_RS09000	0.18	+2.3
1,659,885	+		MMJJ_RS09000	0.18	+0.8
1,659,885	+		MMJJ_RS09000	0.18	+1.3
1,659,885	+		MMJJ_RS09000	0.18	+1.7
1,659,888	-		MMJJ_RS09000	0.18	+0.8
1,659,889	+		MMJJ_RS09000	0.18	+0.9
1,659,890	-		MMJJ_RS09000	0.19	-3.4
1,659,890	-		MMJJ_RS09000	0.19	+1.1
1,659,891	+		MMJJ_RS09000	0.19	+0.4
1,659,895	-		MMJJ_RS09000	0.19	+1.8
1,659,896	+		MMJJ_RS09000	0.19	+0.7
1,659,905	-		MMJJ_RS09000	0.20	+2.1
1,659,906	+		MMJJ_RS09000	0.20	-1.2
1,659,928	+		MMJJ_RS09000	0.22	+1.1
1,659,935	-		MMJJ_RS09000	0.23	+0.6
1,659,939	-		MMJJ_RS09000	0.23	+0.2
1,660,000	+		MMJJ_RS09000	0.29	+2.3
1,660,000	+		MMJJ_RS09000	0.29	+1.7
1,660,000	+		MMJJ_RS09000	0.29	+0.1
1,660,008	-		MMJJ_RS09000	0.30	-4.7
1,660,008	-		MMJJ_RS09000	0.30	+1.4
1,660,009	+		MMJJ_RS09000	0.30	+0.4
1,660,009	+		MMJJ_RS09000	0.30	+1.3
1,660,037	-		MMJJ_RS09000	0.33	+0.7
1,660,047	-		MMJJ_RS09000	0.34	-5.9
1,660,047	-		MMJJ_RS09000	0.34	-3.2
1,660,048	+		MMJJ_RS09000	0.34	+1.1
1,660,048	+		MMJJ_RS09000	0.34	+0.9
1,660,049	-		MMJJ_RS09000	0.34	-3.6
1,660,067	-		MMJJ_RS09000	0.36	+1.5
1,660,068	+		MMJJ_RS09000	0.36	+1.6
1,660,088	-		MMJJ_RS09000	0.38	+0.7
1,660,088	-		MMJJ_RS09000	0.38	+1.2
1,660,088	-		MMJJ_RS09000	0.38	+1.0
1,660,089	+		MMJJ_RS09000	0.38	+1.0
1,660,089	+		MMJJ_RS09000	0.38	+2.4
1,660,089	+		MMJJ_RS09000	0.38	+1.3
1,660,089	+		MMJJ_RS09000	0.38	+1.1
1,660,090	-		MMJJ_RS09000	0.38	+1.5
1,660,091	+		MMJJ_RS09000	0.38	-1.5
1,660,121	-		MMJJ_RS09000	0.41	+0.9
1,660,121	-		MMJJ_RS09000	0.41	+0.4
1,660,168	+		MMJJ_RS09000	0.45	+0.7
1,660,168	+		MMJJ_RS09000	0.45	+1.0
1,660,215	+		MMJJ_RS09000	0.50	+0.8
1,660,216	-		MMJJ_RS09000	0.50	+1.1
1,660,216	-		MMJJ_RS09000	0.50	+1.1
1,660,216	-		MMJJ_RS09000	0.50	+0.2
1,660,216	-		MMJJ_RS09000	0.50	+1.1
1,660,216	-		MMJJ_RS09000	0.50	+1.7
1,660,216	-		MMJJ_RS09000	0.50	+1.2
1,660,217	+		MMJJ_RS09000	0.50	+0.8
1,660,217	+		MMJJ_RS09000	0.50	+0.8
1,660,222	+		MMJJ_RS09000	0.50	+2.3
1,660,222	+		MMJJ_RS09000	0.50	+1.7
1,660,243	+		MMJJ_RS09000	0.52	+1.0
1,660,253	-		MMJJ_RS09000	0.53	+1.6
1,660,253	-		MMJJ_RS09000	0.53	+0.8
1,660,254	+		MMJJ_RS09000	0.53	+1.3
1,660,254	+		MMJJ_RS09000	0.53	+1.6
1,660,254	+		MMJJ_RS09000	0.53	+0.8
1,660,256	+		MMJJ_RS09000	0.54	+0.2
1,660,291	-		MMJJ_RS09000	0.57	+1.2
1,660,291	-		MMJJ_RS09000	0.57	+0.1
1,660,362	+		MMJJ_RS09000	0.64	-0.3
1,660,399	-		MMJJ_RS09000	0.67	+1.0
1,660,400	+		MMJJ_RS09000	0.67	+0.3
1,660,403	-		MMJJ_RS09000	0.68	+1.0
1,660,433	-		MMJJ_RS09000	0.71	-0.3
1,660,434	+		MMJJ_RS09000	0.71	-2.6
1,660,467	-		MMJJ_RS09000	0.74	+0.9
1,660,467	-		MMJJ_RS09000	0.74	+1.3
1,660,467	-		MMJJ_RS09000	0.74	-0.6
1,660,467	-		MMJJ_RS09000	0.74	-0.2
1,660,477	-		MMJJ_RS09000	0.75	+1.2
1,660,478	+		MMJJ_RS09000	0.75	+1.3
1,660,478	+		MMJJ_RS09000	0.75	+1.2
1,660,478	+		MMJJ_RS09000	0.75	-4.7
1,660,478	+		MMJJ_RS09000	0.75	+0.4
1,660,481	-		MMJJ_RS09000	0.75	+0.5
1,660,482	+		MMJJ_RS09000	0.75	+0.9
1,660,503	+		MMJJ_RS09000	0.77	+1.0
1,660,503	+		MMJJ_RS09000	0.77	+0.4
1,660,503	+		MMJJ_RS09000	0.77	+0.6
1,660,514	+		MMJJ_RS09000	0.78	-3.5
1,660,532	-		MMJJ_RS09000	0.80	+0.8
1,660,533	+				+0.2
1,660,533	+		MMJJ_RS09000	0.80	+1.2
1,660,533	+		MMJJ_RS09000	0.80	+1.5
1,660,533	+		MMJJ_RS09000	0.80	+0.2
1,660,533	+		MMJJ_RS09000	0.80	+1.0
1,660,536	-		MMJJ_RS09000	0.80	+0.9
1,660,537	+		MMJJ_RS09000	0.81	+2.2
1,660,562	-		MMJJ_RS09000	0.83	+1.1
1,660,581	+		MMJJ_RS09000	0.85	+2.0
1,660,601	-		MMJJ_RS09000	0.87	+1.0
1,660,744	+				+0.8
1,660,777	-				-3.1
1,660,812	+				+1.5
1,660,832	-				-3.3
1,660,833	+				+1.5
1,660,837	+				+1.5
1,660,894	+				+1.6
1,660,918	-				+0.9
1,660,926	+				+1.3
1,660,967	+		MMJJ_RS09005	0.12	+2.5
1,660,967	+		MMJJ_RS09005	0.12	+1.4
1,660,976	-		MMJJ_RS09005	0.12	+0.9
1,660,976	-		MMJJ_RS09005	0.12	-0.0
1,660,977	+		MMJJ_RS09005	0.12	+0.7
1,661,030	-		MMJJ_RS09005	0.15	+0.3
1,661,031	+		MMJJ_RS09005	0.15	+1.7
1,661,031	+		MMJJ_RS09005	0.15	+1.9
1,661,031	+		MMJJ_RS09005	0.15	+2.1
1,661,048	+		MMJJ_RS09005	0.16	+0.3
1,661,048	+		MMJJ_RS09005	0.16	+1.0
1,661,113	-		MMJJ_RS09005	0.19	+1.4
1,661,117	-		MMJJ_RS09005	0.19	+1.4
1,661,148	-		MMJJ_RS09005	0.21	+0.8
1,661,174	-		MMJJ_RS09005	0.22	+1.4
1,661,184	+		MMJJ_RS09005	0.23	+0.1
1,661,230	-		MMJJ_RS09005	0.25	+1.9
1,661,319	+		MMJJ_RS09005	0.30	-0.0
1,661,328	+		MMJJ_RS09005	0.30	+1.6
1,661,393	-		MMJJ_RS09005	0.34	+0.7
1,661,405	+		MMJJ_RS09005	0.34	+1.1
1,661,435	-		MMJJ_RS09005	0.36	+0.2
1,661,450	+		MMJJ_RS09005	0.37	+0.2
1,661,488	-		MMJJ_RS09005	0.39	+2.7
1,661,496	-		MMJJ_RS09005	0.39	-0.0
1,661,497	+		MMJJ_RS09005	0.39	+1.1
1,661,571	+		MMJJ_RS09005	0.43	+1.4
1,661,579	+		MMJJ_RS09005	0.43	+0.9
1,661,579	+		MMJJ_RS09005	0.43	+1.7
1,661,632	-		MMJJ_RS09005	0.46	+0.5
1,661,632	-		MMJJ_RS09005	0.46	+1.6
1,661,639	+		MMJJ_RS09005	0.46	+1.2
1,661,639	+		MMJJ_RS09005	0.46	+2.1
1,661,646	+		MMJJ_RS09005	0.47	+0.2
1,661,698	-		MMJJ_RS09005	0.49	+0.6
1,661,699	+		MMJJ_RS09005	0.49	-3.1
1,661,699	+		MMJJ_RS09005	0.49	+1.5
1,661,702	-		MMJJ_RS09005	0.50	+1.3
1,661,703	+		MMJJ_RS09005	0.50	+1.7
1,661,703	+		MMJJ_RS09005	0.50	+0.4
1,661,753	+		MMJJ_RS09005	0.52	-5.1
1,661,760	-		MMJJ_RS09005	0.53	+0.9
1,661,779	-		MMJJ_RS09005	0.54	+2.0
1,661,779	-		MMJJ_RS09005	0.54	+1.1
1,661,780	+		MMJJ_RS09005	0.54	+1.2
1,661,781	-		MMJJ_RS09005	0.54	+0.9
1,661,781	-		MMJJ_RS09005	0.54	+1.1
1,661,782	+		MMJJ_RS09005	0.54	+1.8
1,661,808	-		MMJJ_RS09005	0.55	+1.0
1,661,808	-		MMJJ_RS09005	0.55	+0.1
1,661,809	+		MMJJ_RS09005	0.55	+0.9
1,661,809	+		MMJJ_RS09005	0.55	-5.3
1,661,809	+		MMJJ_RS09005	0.55	+0.4
1,661,810	-		MMJJ_RS09005	0.55	+0.7
1,661,810	-		MMJJ_RS09005	0.55	+0.2
1,661,810	-		MMJJ_RS09005	0.55	+0.8
1,661,810	-		MMJJ_RS09005	0.55	+1.8
1,661,810	-		MMJJ_RS09005	0.55	+0.7
1,661,810	-		MMJJ_RS09005	0.55	+0.9
1,661,811	+		MMJJ_RS09005	0.55	+0.8
1,661,811	+		MMJJ_RS09005	0.55	+0.1
1,661,811	+		MMJJ_RS09005	0.55	+2.2
1,661,811	+		MMJJ_RS09005	0.55	+0.1
1,661,811	+		MMJJ_RS09005	0.55	+1.9
1,661,811	+		MMJJ_RS09005	0.55	+0.9
1,661,811	+		MMJJ_RS09005	0.55	+1.3
1,661,811	+		MMJJ_RS09005	0.55	-2.3
1,661,815	+		MMJJ_RS09005	0.55	+2.0
1,661,824	+		MMJJ_RS09005	0.56	+1.0
1,661,824	+		MMJJ_RS09005	0.56	+0.4
1,661,902	-		MMJJ_RS09005	0.60	+1.5
1,661,902	-		MMJJ_RS09005	0.60	+1.6
1,661,903	+		MMJJ_RS09005	0.60	+1.7
1,661,911	-		MMJJ_RS09005	0.60	+0.6
1,661,998	-		MMJJ_RS09005	0.65	+2.0
1,661,998	-		MMJJ_RS09005	0.65	+1.6
1,661,999	+		MMJJ_RS09005	0.65	+0.5
1,662,054	+		MMJJ_RS09005	0.68	+1.5
1,662,056	-		MMJJ_RS09005	0.68	-1.0
1,662,068	-		MMJJ_RS09005	0.69	+0.9
1,662,095	+		MMJJ_RS09005	0.70	+2.3
1,662,095	+		MMJJ_RS09005	0.70	+1.1
1,662,095	+		MMJJ_RS09005	0.70	+1.0
1,662,095	+		MMJJ_RS09005	0.70	+1.2
1,662,126	+		MMJJ_RS09005	0.72	+1.0
1,662,126	+		MMJJ_RS09005	0.72	+1.7
1,662,126	+		MMJJ_RS09005	0.72	+0.7
1,662,128	-		MMJJ_RS09005	0.72	+1.1
1,662,129	+		MMJJ_RS09005	0.72	+1.7
1,662,199	-		MMJJ_RS09005	0.75	+1.4
1,662,199	-		MMJJ_RS09005	0.75	+1.4
1,662,199	-		MMJJ_RS09005	0.75	+1.9
1,662,201	-		MMJJ_RS09005	0.75	+1.7
1,662,202	+		MMJJ_RS09005	0.75	+0.5
1,662,204	-		MMJJ_RS09005	0.76	+1.2
1,662,234	+		MMJJ_RS09005	0.77	+0.9
1,662,245	-		MMJJ_RS09005	0.78	+0.4
1,662,245	-		MMJJ_RS09005	0.78	+0.5
1,662,246	+		MMJJ_RS09005	0.78	+2.3
1,662,286	+		MMJJ_RS09005	0.80	+1.1
1,662,286	+		MMJJ_RS09005	0.80	+0.6
1,662,286	+		MMJJ_RS09005	0.80	+0.9
1,662,286	+		MMJJ_RS09005	0.80	+0.2
1,662,346	-		MMJJ_RS09005	0.83	+1.1
1,662,346	-		MMJJ_RS09005	0.83	+0.5
1,662,348	-		MMJJ_RS09005	0.83	+1.2
1,662,348	-		MMJJ_RS09005	0.83	+0.9
1,662,348	-		MMJJ_RS09005	0.83	+1.5
1,662,349	+		MMJJ_RS09005	0.83	+1.1
1,662,379	+		MMJJ_RS09005	0.85	+1.5
1,662,430	-		MMJJ_RS09005	0.87	+1.3
1,662,430	-		MMJJ_RS09005	0.87	+1.1
1,662,430	-		MMJJ_RS09005	0.87	+1.9
1,662,445	-		MMJJ_RS09005	0.88	+4.3
1,662,445	-		MMJJ_RS09005	0.88	+0.9
1,662,446	+		MMJJ_RS09005	0.88	+1.7
1,662,449	-		MMJJ_RS09005	0.88	+0.6
1,662,449	-		MMJJ_RS09005	0.88	+1.1
1,662,450	+		MMJJ_RS09005	0.88	+1.2
1,662,455	-		MMJJ_RS09005	0.89	+0.8
1,662,456	+		MMJJ_RS09005	0.89	+1.0
1,662,456	+		MMJJ_RS09005	0.89	+0.5
1,662,456	+		MMJJ_RS09005	0.89	+0.5
1,662,456	+		MMJJ_RS09005	0.89	+1.4
1,662,456	+		MMJJ_RS09005	0.89	+0.5
1,662,457	-		MMJJ_RS09005	0.89	+1.9
1,662,457	-		MMJJ_RS09005	0.89	+1.3
1,662,457	-		MMJJ_RS09005	0.89	-0.3
1,662,457	-		MMJJ_RS09005	0.89	+1.5
1,662,458	+		MMJJ_RS09005	0.89	+2.0
1,662,458	+		MMJJ_RS09005	0.89	+1.0
1,662,458	+		MMJJ_RS09005	0.89	+0.8
1,662,463	-		MMJJ_RS09005	0.89	+0.4
1,662,464	+		MMJJ_RS09005	0.89	+2.6
1,662,509	-				-0.3
1,662,510	+				+1.3
1,662,510	+				+0.6
1,662,510	+				+0.4
1,662,520	+				+1.3
1,662,520	+				-2.6
1,662,520	+				+0.8
1,662,697	+				+0.7
1,662,699	-				+0.5
1,662,699	-				-0.5
1,662,700	+				-0.6
1,662,727	+				+0.5
1,662,728	-				-0.6
1,662,728	-				+0.8
1,662,728	-				+0.2
1,662,787	+				+0.5
1,662,828	-				-0.3
1,662,828	-				+1.2
1,662,828	-				-0.1
1,662,829	+				-0.2
1,662,829	+				-0.0
1,662,834	+				-0.8
1,662,849	-				-0.4
1,662,850	+				-1.0
1,662,895	-		MMJJ_RS09010	0.15	-2.6
1,662,895	-		MMJJ_RS09010	0.15	-0.7
1,662,895	-		MMJJ_RS09010	0.15	-0.5
1,662,933	-		MMJJ_RS09010	0.23	+0.4
1,662,994	-		MMJJ_RS09010	0.36	+0.4
1,662,995	+		MMJJ_RS09010	0.36	-0.1
1,663,055	+		MMJJ_RS09010	0.48	-0.2
1,663,055	+		MMJJ_RS09010	0.48	+0.2
1,663,139	+		MMJJ_RS09010	0.66	-4.2
1,663,235	-		MMJJ_RS09010	0.86	+0.4
1,663,242	-		MMJJ_RS09010	0.87	+0.3
1,663,255	-				-3.8
1,663,255	-				+0.0
1,663,255	-				-1.3
1,663,255	-				+0.3
1,663,255	-				-2.9
1,663,255	-				+0.1
1,663,256	+				-0.9
1,663,256	+				+0.6
1,663,256	+				+0.1
1,663,259	-				-0.1
1,663,259	-				+0.0
1,663,271	+				-0.5
1,663,294	-				-1.4
1,663,294	-				-4.1
1,663,294	-				-0.5
1,663,302	-				-0.4
1,663,304	-				+0.6
1,663,329	+				+1.7
1,663,378	+				-0.6
1,663,464	-		MMJJ_RS09015	0.10	+0.8