Experiment: 2-Deoxy-D-Ribose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06018 and H281DRAFT_06019 are separated by 160 nucleotides H281DRAFT_06019 and H281DRAFT_06020 are separated by 186 nucleotides
H281DRAFT_06018: H281DRAFT_06018 - choline monooxygenase, at 21,467 to 22,573
_06018
H281DRAFT_06019: H281DRAFT_06019 - thiosulfate/3-mercaptopyruvate sulfurtransferase, at 22,734 to 23,603
_06019
H281DRAFT_06020: H281DRAFT_06020 - carboxymethylenebutenolidase, at 23,790 to 24,662
_06020
Position (kb)
22
23
24 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 21.761 kb on - strand, within H281DRAFT_06018 at 21.761 kb on - strand, within H281DRAFT_06018 at 21.788 kb on + strand, within H281DRAFT_06018 at 21.788 kb on + strand, within H281DRAFT_06018 at 21.789 kb on - strand, within H281DRAFT_06018 at 21.789 kb on - strand, within H281DRAFT_06018 at 21.789 kb on - strand, within H281DRAFT_06018 at 21.999 kb on - strand, within H281DRAFT_06018 at 21.999 kb on - strand, within H281DRAFT_06018 at 21.999 kb on - strand, within H281DRAFT_06018 at 21.999 kb on - strand, within H281DRAFT_06018 at 22.025 kb on + strand, within H281DRAFT_06018 at 22.026 kb on - strand, within H281DRAFT_06018 at 22.037 kb on + strand, within H281DRAFT_06018 at 22.038 kb on - strand, within H281DRAFT_06018 at 22.116 kb on - strand, within H281DRAFT_06018 at 22.116 kb on - strand, within H281DRAFT_06018 at 22.172 kb on + strand, within H281DRAFT_06018 at 22.247 kb on + strand, within H281DRAFT_06018 at 22.247 kb on + strand, within H281DRAFT_06018 at 22.247 kb on + strand, within H281DRAFT_06018 at 22.248 kb on - strand, within H281DRAFT_06018 at 22.248 kb on - strand, within H281DRAFT_06018 at 22.250 kb on + strand, within H281DRAFT_06018 at 22.251 kb on - strand, within H281DRAFT_06018 at 22.346 kb on + strand, within H281DRAFT_06018 at 22.346 kb on + strand, within H281DRAFT_06018 at 22.346 kb on + strand, within H281DRAFT_06018 at 22.347 kb on - strand, within H281DRAFT_06018 at 22.347 kb on - strand, within H281DRAFT_06018 at 22.347 kb on - strand, within H281DRAFT_06018 at 22.406 kb on + strand, within H281DRAFT_06018 at 22.406 kb on + strand, within H281DRAFT_06018 at 22.406 kb on + strand, within H281DRAFT_06018 at 22.407 kb on - strand, within H281DRAFT_06018 at 22.407 kb on - strand, within H281DRAFT_06018 at 22.407 kb on - strand, within H281DRAFT_06018 at 22.650 kb on - strand at 22.654 kb on + strand at 22.654 kb on + strand at 22.655 kb on - strand at 22.655 kb on - strand at 22.749 kb on + strand at 22.749 kb on + strand at 22.750 kb on - strand at 22.750 kb on - strand at 22.896 kb on + strand, within H281DRAFT_06019 at 22.896 kb on + strand, within H281DRAFT_06019 at 22.896 kb on + strand, within H281DRAFT_06019 at 22.937 kb on + strand, within H281DRAFT_06019 at 23.049 kb on + strand, within H281DRAFT_06019 at 23.049 kb on + strand at 23.050 kb on - strand, within H281DRAFT_06019 at 23.249 kb on + strand, within H281DRAFT_06019 at 23.249 kb on + strand at 23.399 kb on + strand, within H281DRAFT_06019 at 23.400 kb on - strand, within H281DRAFT_06019 at 23.425 kb on + strand, within H281DRAFT_06019 at 23.602 kb on - strand at 23.668 kb on + strand at 23.668 kb on + strand at 23.668 kb on + strand at 23.669 kb on - strand at 23.678 kb on + strand at 23.678 kb on + strand at 23.678 kb on + strand at 23.860 kb on + strand at 23.861 kb on - strand at 23.906 kb on - strand, within H281DRAFT_06020 at 23.932 kb on - strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.066 kb on - strand, within H281DRAFT_06020 at 24.097 kb on + strand, within H281DRAFT_06020 at 24.355 kb on + strand, within H281DRAFT_06020 at 24.392 kb on + strand, within H281DRAFT_06020 at 24.393 kb on - strand, within H281DRAFT_06020 at 24.428 kb on + strand, within H281DRAFT_06020
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 20 mM (C) remove 21,761 - H281DRAFT_06018 0.27 +1.0 21,761 - H281DRAFT_06018 0.27 +0.1 21,788 + H281DRAFT_06018 0.29 +0.1 21,788 + H281DRAFT_06018 0.29 +0.4 21,789 - H281DRAFT_06018 0.29 -0.8 21,789 - H281DRAFT_06018 0.29 +1.1 21,789 - H281DRAFT_06018 0.29 +1.1 21,999 - H281DRAFT_06018 0.48 -0.7 21,999 - H281DRAFT_06018 0.48 +0.5 21,999 - H281DRAFT_06018 0.48 +0.2 21,999 - H281DRAFT_06018 0.48 +1.3 22,025 + H281DRAFT_06018 0.50 -0.1 22,026 - H281DRAFT_06018 0.50 +0.4 22,037 + H281DRAFT_06018 0.51 -0.1 22,038 - H281DRAFT_06018 0.52 +1.0 22,116 - H281DRAFT_06018 0.59 -0.8 22,116 - H281DRAFT_06018 0.59 +0.6 22,172 + H281DRAFT_06018 0.64 +0.7 22,247 + H281DRAFT_06018 0.70 +0.6 22,247 + H281DRAFT_06018 0.70 +0.8 22,247 + H281DRAFT_06018 0.70 +1.0 22,248 - H281DRAFT_06018 0.71 +0.7 22,248 - H281DRAFT_06018 0.71 -0.4 22,250 + H281DRAFT_06018 0.71 +1.4 22,251 - H281DRAFT_06018 0.71 +0.7 22,346 + H281DRAFT_06018 0.79 -0.2 22,346 + H281DRAFT_06018 0.79 +0.5 22,346 + H281DRAFT_06018 0.79 +0.6 22,347 - H281DRAFT_06018 0.79 +0.9 22,347 - H281DRAFT_06018 0.79 -1.3 22,347 - H281DRAFT_06018 0.79 +0.2 22,406 + H281DRAFT_06018 0.85 +0.3 22,406 + H281DRAFT_06018 0.85 +0.1 22,406 + H281DRAFT_06018 0.85 -0.2 22,407 - H281DRAFT_06018 0.85 +0.6 22,407 - H281DRAFT_06018 0.85 +1.6 22,407 - H281DRAFT_06018 0.85 +0.5 22,650 - +0.1 22,654 + -2.0 22,654 + +0.4 22,655 - +0.3 22,655 - +0.5 22,749 + +1.1 22,749 + +0.2 22,750 - -0.5 22,750 - +1.4 22,896 + H281DRAFT_06019 0.19 +0.1 22,896 + H281DRAFT_06019 0.19 -1.2 22,896 + H281DRAFT_06019 0.19 -0.1 22,937 + H281DRAFT_06019 0.23 +0.0 23,049 + H281DRAFT_06019 0.36 -0.6 23,049 + +1.0 23,050 - H281DRAFT_06019 0.36 -0.8 23,249 + H281DRAFT_06019 0.59 +1.1 23,249 + +2.0 23,399 + H281DRAFT_06019 0.76 -0.2 23,400 - H281DRAFT_06019 0.77 -0.5 23,425 + H281DRAFT_06019 0.79 -0.5 23,602 - -1.4 23,668 + -1.2 23,668 + +0.8 23,668 + -0.5 23,669 - +1.4 23,678 + -0.0 23,678 + -0.2 23,678 + -0.2 23,860 + +0.7 23,861 - +0.7 23,906 - H281DRAFT_06020 0.13 +0.3 23,932 - H281DRAFT_06020 0.16 -1.2 24,065 + H281DRAFT_06020 0.32 +0.9 24,065 + H281DRAFT_06020 0.32 +0.4 24,065 + H281DRAFT_06020 0.32 +2.0 24,065 + H281DRAFT_06020 0.32 +0.1 24,066 - H281DRAFT_06020 0.32 -0.3 24,097 + H281DRAFT_06020 0.35 -0.0 24,355 + H281DRAFT_06020 0.65 +0.3 24,392 + H281DRAFT_06020 0.69 -0.6 24,393 - H281DRAFT_06020 0.69 -0.0 24,428 + H281DRAFT_06020 0.73 +1.0
Or see this region's nucleotide sequence