Experiment: 2-Deoxy-D-Ribose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05835 and H281DRAFT_05836 are separated by 67 nucleotides H281DRAFT_05836 and H281DRAFT_05837 are separated by 251 nucleotides
H281DRAFT_05835: H281DRAFT_05835 - 3-hydroxyisobutyrate dehydrogenase, at 110,536 to 111,405
_05835
H281DRAFT_05836: H281DRAFT_05836 - Threonine/homoserine/homoserine lactone efflux protein, at 111,473 to 112,120
_05836
H281DRAFT_05837: H281DRAFT_05837 - outer membrane protein, at 112,372 to 113,196
_05837
Position (kb)
111
112
113 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.504 kb on + strand at 110.505 kb on - strand at 110.518 kb on + strand at 110.519 kb on - strand at 110.519 kb on - strand at 110.612 kb on + strand at 110.612 kb on + strand at 110.612 kb on + strand at 110.612 kb on + strand at 110.612 kb on + strand at 110.613 kb on - strand at 110.613 kb on - strand at 110.618 kb on + strand at 110.618 kb on + strand at 110.618 kb on + strand at 110.619 kb on - strand at 110.619 kb on - strand at 110.619 kb on - strand at 110.869 kb on + strand, within H281DRAFT_05835 at 110.870 kb on - strand, within H281DRAFT_05835 at 111.181 kb on + strand, within H281DRAFT_05835 at 111.181 kb on + strand, within H281DRAFT_05835 at 111.209 kb on - strand, within H281DRAFT_05835 at 111.445 kb on + strand at 111.445 kb on + strand at 111.445 kb on + strand at 111.445 kb on + strand at 111.446 kb on - strand at 111.446 kb on - strand at 111.484 kb on + strand at 111.484 kb on + strand at 111.484 kb on + strand at 111.484 kb on + strand at 111.484 kb on + strand at 111.485 kb on - strand at 111.587 kb on - strand, within H281DRAFT_05836 at 111.725 kb on + strand, within H281DRAFT_05836 at 111.725 kb on + strand, within H281DRAFT_05836 at 111.726 kb on - strand, within H281DRAFT_05836 at 111.729 kb on + strand, within H281DRAFT_05836 at 111.729 kb on + strand, within H281DRAFT_05836 at 111.729 kb on + strand, within H281DRAFT_05836 at 111.729 kb on + strand, within H281DRAFT_05836 at 111.987 kb on - strand, within H281DRAFT_05836 at 112.108 kb on - strand at 112.218 kb on - strand at 112.219 kb on + strand at 112.220 kb on - strand at 112.220 kb on - strand at 112.274 kb on - strand at 112.312 kb on - strand at 112.380 kb on + strand at 112.381 kb on - strand at 112.381 kb on - strand at 112.382 kb on + strand at 112.382 kb on + strand at 112.382 kb on + strand at 112.383 kb on - strand at 112.467 kb on + strand, within H281DRAFT_05837 at 112.468 kb on - strand, within H281DRAFT_05837 at 112.468 kb on - strand, within H281DRAFT_05837 at 112.468 kb on - strand, within H281DRAFT_05837 at 112.499 kb on + strand, within H281DRAFT_05837 at 112.500 kb on - strand, within H281DRAFT_05837 at 112.541 kb on + strand, within H281DRAFT_05837 at 112.541 kb on + strand, within H281DRAFT_05837 at 112.542 kb on - strand, within H281DRAFT_05837 at 112.542 kb on - strand, within H281DRAFT_05837 at 112.703 kb on + strand, within H281DRAFT_05837 at 112.703 kb on + strand, within H281DRAFT_05837 at 112.703 kb on + strand, within H281DRAFT_05837 at 112.704 kb on - strand, within H281DRAFT_05837 at 112.704 kb on - strand, within H281DRAFT_05837 at 112.738 kb on - strand, within H281DRAFT_05837 at 112.757 kb on + strand, within H281DRAFT_05837 at 112.758 kb on - strand, within H281DRAFT_05837 at 112.758 kb on - strand, within H281DRAFT_05837 at 112.760 kb on + strand, within H281DRAFT_05837 at 112.760 kb on + strand, within H281DRAFT_05837 at 112.761 kb on - strand, within H281DRAFT_05837 at 112.886 kb on + strand, within H281DRAFT_05837 at 112.886 kb on + strand, within H281DRAFT_05837 at 112.886 kb on + strand, within H281DRAFT_05837 at 112.887 kb on - strand, within H281DRAFT_05837 at 112.887 kb on - strand, within H281DRAFT_05837 at 112.946 kb on + strand, within H281DRAFT_05837 at 112.947 kb on - strand, within H281DRAFT_05837 at 112.947 kb on - strand, within H281DRAFT_05837
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 20 mM (C) remove 110,484 + -0.6 110,484 + +0.4 110,484 + -0.1 110,484 + +0.2 110,484 + -1.8 110,484 + +0.3 110,484 + +0.1 110,484 + -0.2 110,484 + -0.5 110,484 + -0.5 110,484 + -0.2 110,485 - -0.1 110,485 - +0.6 110,485 - -1.7 110,485 - -0.2 110,485 - +0.0 110,485 - -0.3 110,485 - -0.0 110,485 - -0.2 110,485 - +0.6 110,485 - -1.4 110,485 - -0.1 110,485 - -0.1 110,485 - +0.0 110,485 - -0.4 110,504 + +0.5 110,505 - -0.0 110,518 + +0.5 110,519 - -1.0 110,519 - -0.2 110,612 + -1.8 110,612 + +0.1 110,612 + -0.0 110,612 + +0.1 110,612 + -0.2 110,613 - -0.4 110,613 - -0.3 110,618 + -0.1 110,618 + +0.2 110,618 + +0.4 110,619 - -0.2 110,619 - +0.4 110,619 - -0.7 110,869 + H281DRAFT_05835 0.38 -1.9 110,870 - H281DRAFT_05835 0.38 -0.2 111,181 + H281DRAFT_05835 0.74 +1.2 111,181 + H281DRAFT_05835 0.74 +1.1 111,209 - H281DRAFT_05835 0.77 +0.8 111,445 + -1.7 111,445 + +0.2 111,445 + +0.1 111,445 + -0.2 111,446 - -0.0 111,446 - +0.4 111,484 + +0.2 111,484 + -0.7 111,484 + -0.5 111,484 + -0.2 111,484 + -0.3 111,485 - -0.5 111,587 - H281DRAFT_05836 0.18 -1.9 111,725 + H281DRAFT_05836 0.39 +0.3 111,725 + H281DRAFT_05836 0.39 +0.2 111,726 - H281DRAFT_05836 0.39 +0.2 111,729 + H281DRAFT_05836 0.40 +0.3 111,729 + H281DRAFT_05836 0.40 -0.1 111,729 + H281DRAFT_05836 0.40 -0.1 111,729 + H281DRAFT_05836 0.40 +1.2 111,987 - H281DRAFT_05836 0.79 +0.5 112,108 - +0.4 112,218 - +0.1 112,219 + +1.9 112,220 - +0.9 112,220 - -0.6 112,274 - -0.2 112,312 - +0.8 112,380 + -0.1 112,381 - -0.3 112,381 - +0.1 112,382 + +0.9 112,382 + -0.0 112,382 + +0.8 112,383 - -0.4 112,467 + H281DRAFT_05837 0.12 +1.5 112,468 - H281DRAFT_05837 0.12 +0.6 112,468 - H281DRAFT_05837 0.12 +0.3 112,468 - H281DRAFT_05837 0.12 -2.9 112,499 + H281DRAFT_05837 0.15 +0.5 112,500 - H281DRAFT_05837 0.16 -0.7 112,541 + H281DRAFT_05837 0.20 -0.2 112,541 + H281DRAFT_05837 0.20 +0.6 112,542 - H281DRAFT_05837 0.21 +0.6 112,542 - H281DRAFT_05837 0.21 +0.6 112,703 + H281DRAFT_05837 0.40 -0.2 112,703 + H281DRAFT_05837 0.40 +0.3 112,703 + H281DRAFT_05837 0.40 +0.7 112,704 - H281DRAFT_05837 0.40 -0.6 112,704 - H281DRAFT_05837 0.40 +0.6 112,738 - H281DRAFT_05837 0.44 +0.8 112,757 + H281DRAFT_05837 0.47 -0.3 112,758 - H281DRAFT_05837 0.47 +0.4 112,758 - H281DRAFT_05837 0.47 +0.1 112,760 + H281DRAFT_05837 0.47 -0.8 112,760 + H281DRAFT_05837 0.47 -0.3 112,761 - H281DRAFT_05837 0.47 -0.2 112,886 + H281DRAFT_05837 0.62 -0.1 112,886 + H281DRAFT_05837 0.62 -0.2 112,886 + H281DRAFT_05837 0.62 -0.2 112,887 - H281DRAFT_05837 0.62 +0.8 112,887 - H281DRAFT_05837 0.62 -0.1 112,946 + H281DRAFT_05837 0.70 +0.6 112,947 - H281DRAFT_05837 0.70 +0.7 112,947 - H281DRAFT_05837 0.70 -0.4
Or see this region's nucleotide sequence