Experiment: 2-Deoxy-D-Ribose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04877 and H281DRAFT_04878 are separated by 91 nucleotides H281DRAFT_04878 and H281DRAFT_04879 are separated by 251 nucleotides H281DRAFT_04879 and H281DRAFT_04880 are separated by 466 nucleotides
H281DRAFT_04877: H281DRAFT_04877 - Predicted dithiol-disulfide oxidoreductase, DUF899 family, at 20,671 to 21,441
_04877
H281DRAFT_04878: H281DRAFT_04878 - transcriptional regulator, ArsR family, at 21,533 to 21,958
_04878
H281DRAFT_04879: H281DRAFT_04879 - putative MFS transporter, AGZA family, xanthine/uracil permease, at 22,210 to 23,592
_04879
H281DRAFT_04880: H281DRAFT_04880 - PRC-barrel domain-containing protein, at 24,059 to 25,033
_04880
Position (kb) 22
23
24 Strain fitness (log2 ratio) -2
-1
0
1
2 at 21.347 kb on - strand, within H281DRAFT_04877 at 21.475 kb on + strand at 21.480 kb on - strand at 21.767 kb on - strand, within H281DRAFT_04878 at 21.965 kb on - strand at 22.002 kb on - strand at 22.232 kb on + strand at 22.372 kb on + strand, within H281DRAFT_04879 at 22.457 kb on + strand, within H281DRAFT_04879 at 22.647 kb on + strand at 22.790 kb on - strand, within H281DRAFT_04879 at 22.874 kb on - strand, within H281DRAFT_04879 at 23.025 kb on + strand, within H281DRAFT_04879 at 23.438 kb on + strand, within H281DRAFT_04879 at 23.516 kb on + strand at 23.774 kb on + strand at 23.775 kb on - strand at 23.775 kb on - strand at 23.775 kb on - strand at 23.776 kb on + strand at 24.012 kb on + strand at 24.412 kb on + strand, within H281DRAFT_04880 at 24.412 kb on + strand, within H281DRAFT_04880 at 24.412 kb on + strand, within H281DRAFT_04880
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 20 mM (C) remove 21,347 - H281DRAFT_04877 0.88 -1.9 21,475 + +0.4 21,480 - +0.3 21,767 - H281DRAFT_04878 0.55 -0.4 21,965 - +0.6 22,002 - -0.6 22,232 + +0.7 22,372 + H281DRAFT_04879 0.12 -0.3 22,457 + H281DRAFT_04879 0.18 -0.3 22,647 + -1.6 22,790 - H281DRAFT_04879 0.42 -0.6 22,874 - H281DRAFT_04879 0.48 +0.5 23,025 + H281DRAFT_04879 0.59 +2.0 23,438 + H281DRAFT_04879 0.89 +0.3 23,516 + +0.2 23,774 + -1.9 23,775 - -0.7 23,775 - +0.8 23,775 - -0.1 23,776 + -1.8 24,012 + +0.2 24,412 + H281DRAFT_04880 0.36 +0.4 24,412 + H281DRAFT_04880 0.36 -0.3 24,412 + H281DRAFT_04880 0.36 +1.0
Or see this region's nucleotide sequence