Experiment: 2-Deoxy-D-Ribose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00112 and H281DRAFT_00113 are separated by 42 nucleotides H281DRAFT_00113 and H281DRAFT_00114 are separated by 228 nucleotides
H281DRAFT_00112: H281DRAFT_00112 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 119,186 to 120,346
_00112
H281DRAFT_00113: H281DRAFT_00113 - transcriptional regulator, LysR family, at 120,389 to 121,330
_00113
H281DRAFT_00114: H281DRAFT_00114 - sulfite reductase (NADPH) beta subunit, at 121,559 to 123,238
_00114
Position (kb)
120
121
122 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 119.406 kb on + strand, within H281DRAFT_00112 at 119.455 kb on - strand, within H281DRAFT_00112 at 119.761 kb on + strand, within H281DRAFT_00112 at 119.762 kb on - strand, within H281DRAFT_00112 at 119.838 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112 at 120.156 kb on + strand, within H281DRAFT_00112 at 120.214 kb on + strand, within H281DRAFT_00112 at 120.221 kb on + strand, within H281DRAFT_00112 at 120.483 kb on + strand at 120.483 kb on + strand at 120.484 kb on - strand, within H281DRAFT_00113 at 120.484 kb on - strand, within H281DRAFT_00113 at 120.865 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 121.078 kb on + strand, within H281DRAFT_00113 at 121.249 kb on + strand at 121.249 kb on + strand at 121.251 kb on + strand at 121.252 kb on - strand at 121.332 kb on + strand at 121.333 kb on - strand at 121.334 kb on + strand at 121.428 kb on - strand at 121.435 kb on - strand at 121.451 kb on + strand at 121.451 kb on + strand at 121.452 kb on - strand at 121.457 kb on + strand at 121.457 kb on + strand at 121.563 kb on - strand at 121.563 kb on - strand at 121.563 kb on - strand at 121.568 kb on + strand at 121.569 kb on - strand at 121.694 kb on + strand at 121.698 kb on - strand at 121.712 kb on + strand at 121.713 kb on - strand at 122.120 kb on + strand, within H281DRAFT_00114 at 122.120 kb on + strand, within H281DRAFT_00114 at 122.268 kb on - strand, within H281DRAFT_00114 at 122.297 kb on + strand, within H281DRAFT_00114 at 122.298 kb on - strand, within H281DRAFT_00114
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 20 mM (C) remove 119,406 + H281DRAFT_00112 0.19 +0.5 119,455 - H281DRAFT_00112 0.23 -0.9 119,761 + H281DRAFT_00112 0.50 -0.2 119,762 - H281DRAFT_00112 0.50 +1.1 119,838 + H281DRAFT_00112 0.56 +0.1 119,892 + H281DRAFT_00112 0.61 -0.1 119,892 + H281DRAFT_00112 0.61 +0.8 120,156 + H281DRAFT_00112 0.84 -0.3 120,214 + H281DRAFT_00112 0.89 +0.6 120,221 + H281DRAFT_00112 0.89 +0.2 120,483 + -3.3 120,483 + -2.8 120,484 - H281DRAFT_00113 0.10 -3.2 120,484 - H281DRAFT_00113 0.10 -2.1 120,865 + H281DRAFT_00113 0.51 -4.3 120,867 + H281DRAFT_00113 0.51 -3.3 120,867 + H281DRAFT_00113 0.51 -3.4 120,867 + H281DRAFT_00113 0.51 -1.3 121,078 + H281DRAFT_00113 0.73 -2.4 121,249 + +0.1 121,249 + -1.4 121,251 + +0.4 121,252 - -2.8 121,332 + +0.3 121,333 - +0.5 121,334 + -0.1 121,428 - +0.1 121,435 - -3.7 121,451 + -0.1 121,451 + +0.1 121,452 - -1.7 121,457 + +0.2 121,457 + -0.6 121,563 - -3.9 121,563 - -3.6 121,563 - -3.8 121,568 + -2.5 121,569 - -2.7 121,694 + -0.7 121,698 - -3.3 121,712 + -1.2 121,713 - -2.2 122,120 + H281DRAFT_00114 0.33 -4.4 122,120 + H281DRAFT_00114 0.33 -5.0 122,268 - H281DRAFT_00114 0.42 -3.5 122,297 + H281DRAFT_00114 0.44 -1.2 122,298 - H281DRAFT_00114 0.44 -0.8
Or see this region's nucleotide sequence