Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3231 and Dsui_3232 are separated by 253 nucleotides Dsui_3232 and Dsui_3233 are separated by 14 nucleotides Dsui_3233 and Dsui_3234 are separated by 69 nucleotides
Dsui_3231: Dsui_3231 - hypothetical protein, at 3,471,239 to 3,474,592
_3231
Dsui_3232: Dsui_3232 - activator of osmoprotectant transporter ProP, at 3,474,846 to 3,475,268
_3232
Dsui_3233: Dsui_3233 - hypothetical protein, at 3,475,283 to 3,475,750
_3233
Dsui_3234: Dsui_3234 - putative proteasome-type protease, at 3,475,820 to 3,476,548
_3234
Position (kb)
3474
3475
3476 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3473.888 kb on + strand, within Dsui_3231 at 3473.893 kb on - strand, within Dsui_3231 at 3474.080 kb on + strand at 3474.090 kb on - strand at 3474.147 kb on - strand at 3474.435 kb on - strand at 3474.491 kb on + strand at 3474.499 kb on - strand at 3474.584 kb on + strand at 3474.599 kb on + strand at 3474.607 kb on - strand at 3474.719 kb on - strand at 3474.811 kb on + strand at 3474.850 kb on + strand at 3474.973 kb on - strand at 3475.117 kb on + strand, within Dsui_3232 at 3475.139 kb on + strand, within Dsui_3232 at 3475.195 kb on - strand, within Dsui_3232 at 3475.278 kb on - strand at 3475.573 kb on + strand, within Dsui_3233 at 3475.581 kb on - strand, within Dsui_3233 at 3475.665 kb on - strand at 3475.667 kb on + strand, within Dsui_3233 at 3475.725 kb on - strand at 3475.766 kb on + strand at 3475.774 kb on - strand at 3475.831 kb on - strand at 3475.935 kb on + strand, within Dsui_3234 at 3475.935 kb on + strand, within Dsui_3234 at 3475.990 kb on + strand, within Dsui_3234 at 3476.041 kb on + strand, within Dsui_3234 at 3476.041 kb on + strand at 3476.041 kb on + strand, within Dsui_3234 at 3476.042 kb on + strand, within Dsui_3234 at 3476.130 kb on - strand, within Dsui_3234 at 3476.169 kb on + strand, within Dsui_3234 at 3476.184 kb on + strand, within Dsui_3234
Per-strain Table
Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate remove 3,473,888 + Dsui_3231 0.79 +0.7 3,473,893 - Dsui_3231 0.79 -2.0 3,474,080 + -1.4 3,474,090 - -1.9 3,474,147 - -2.5 3,474,435 - -0.2 3,474,491 + -0.6 3,474,499 - -1.2 3,474,584 + -3.2 3,474,599 + -2.4 3,474,607 - -0.4 3,474,719 - +0.8 3,474,811 + +0.8 3,474,850 + +0.6 3,474,973 - +0.4 3,475,117 + Dsui_3232 0.64 +0.4 3,475,139 + Dsui_3232 0.69 +1.2 3,475,195 - Dsui_3232 0.83 +0.5 3,475,278 - +1.7 3,475,573 + Dsui_3233 0.62 +1.1 3,475,581 - Dsui_3233 0.64 -0.1 3,475,665 - -2.3 3,475,667 + Dsui_3233 0.82 +0.7 3,475,725 - +0.5 3,475,766 + +0.3 3,475,774 - +0.2 3,475,831 - -0.7 3,475,935 + Dsui_3234 0.16 -1.5 3,475,935 + Dsui_3234 0.16 +0.2 3,475,990 + Dsui_3234 0.23 -0.1 3,476,041 + Dsui_3234 0.30 -0.6 3,476,041 + +0.4 3,476,041 + Dsui_3234 0.30 -0.8 3,476,042 + Dsui_3234 0.30 -0.8 3,476,130 - Dsui_3234 0.43 +0.3 3,476,169 + Dsui_3234 0.48 -2.8 3,476,184 + Dsui_3234 0.50 -0.2
Or see this region's nucleotide sequence