Strain Fitness in Dechlorosoma suillum PS around Dsui_3139

Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3138 and Dsui_3139 are separated by 21 nucleotidesDsui_3139 and Dsui_3140 overlap by 4 nucleotidesDsui_3140 and Dsui_3141 overlap by 1 nucleotides Dsui_3138: Dsui_3138 - ribosome-associated GTPase EngA, at 3,359,834 to 3,361,219 _3138 Dsui_3139: Dsui_3139 - outer membrane assembly lipoprotein YfgL, at 3,361,241 to 3,362,389 _3139 Dsui_3140: Dsui_3140 - hypothetical protein, at 3,362,386 to 3,363,060 _3140 Dsui_3141: Dsui_3141 - histidyl-tRNA synthetase, at 3,363,060 to 3,364,358 _3141 Position (kb) 3361 3362 3363Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3361.257 kb on - strandat 3361.400 kb on - strand, within Dsui_3139at 3361.523 kb on - strand, within Dsui_3139at 3361.617 kb on - strand, within Dsui_3139at 3361.657 kb on - strand, within Dsui_3139at 3361.659 kb on - strand, within Dsui_3139at 3361.715 kb on - strand, within Dsui_3139at 3361.721 kb on - strand, within Dsui_3139at 3362.148 kb on - strand, within Dsui_3139at 3362.209 kb on - strand, within Dsui_3139at 3362.291 kb on - strandat 3362.334 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
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3,361,257 - +0.6
3,361,400 - Dsui_3139 0.14 -3.7
3,361,523 - Dsui_3139 0.25 -3.2
3,361,617 - Dsui_3139 0.33 -3.3
3,361,657 - Dsui_3139 0.36 -3.5
3,361,659 - Dsui_3139 0.36 -4.0
3,361,715 - Dsui_3139 0.41 -3.8
3,361,721 - Dsui_3139 0.42 -2.7
3,362,148 - Dsui_3139 0.79 -3.0
3,362,209 - Dsui_3139 0.84 -3.3
3,362,291 - -2.9
3,362,334 - -2.5

Or see this region's nucleotide sequence