Strain Fitness in Dechlorosoma suillum PS around Dsui_2456

Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2455 and Dsui_2456 overlap by 14 nucleotidesDsui_2456 and Dsui_2457 are separated by 56 nucleotides Dsui_2455: Dsui_2455 - periplasmic serine protease, Do/DeqQ family, at 2,613,296 to 2,614,741 _2455 Dsui_2456: Dsui_2456 - Glutaredoxin-like domain (DUF836), at 2,614,728 to 2,615,000 _2456 Dsui_2457: Dsui_2457 - GTP-binding protein LepA, at 2,615,057 to 2,616,850 _2457 Position (kb) 2614 2615 2616Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2613.733 kb on + strand, within Dsui_2455at 2613.792 kb on + strand, within Dsui_2455at 2613.792 kb on + strand, within Dsui_2455at 2613.792 kb on + strand, within Dsui_2455at 2613.792 kb on + strand, within Dsui_2455at 2613.794 kb on + strand, within Dsui_2455at 2613.902 kb on + strand, within Dsui_2455at 2613.903 kb on + strand, within Dsui_2455at 2613.907 kb on + strand, within Dsui_2455at 2614.159 kb on + strand, within Dsui_2455at 2614.167 kb on - strandat 2614.231 kb on + strand, within Dsui_2455at 2614.248 kb on + strand, within Dsui_2455at 2614.275 kb on + strand, within Dsui_2455at 2614.314 kb on + strand, within Dsui_2455at 2614.393 kb on + strand, within Dsui_2455at 2614.460 kb on - strandat 2614.713 kb on + strandat 2614.721 kb on + strandat 2614.721 kb on - strandat 2614.723 kb on + strandat 2614.754 kb on + strandat 2614.762 kb on - strand, within Dsui_2456at 2614.762 kb on - strand, within Dsui_2456at 2614.764 kb on + strand, within Dsui_2456at 2614.787 kb on + strand, within Dsui_2456at 2614.789 kb on + strand, within Dsui_2456at 2614.963 kb on + strand, within Dsui_2456at 2614.963 kb on + strand, within Dsui_2456at 2615.031 kb on + strandat 2615.055 kb on + strandat 2615.134 kb on + strandat 2615.174 kb on + strandat 2615.271 kb on + strand, within Dsui_2457at 2615.384 kb on + strand, within Dsui_2457at 2615.424 kb on + strand, within Dsui_2457at 2615.704 kb on + strand, within Dsui_2457at 2615.731 kb on + strand, within Dsui_2457at 2615.880 kb on + strand, within Dsui_2457at 2615.955 kb on + strand, within Dsui_2457

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Per-strain Table

Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
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2,613,733 + Dsui_2455 0.30 +0.2
2,613,792 + Dsui_2455 0.34 +1.0
2,613,792 + Dsui_2455 0.34 +0.0
2,613,792 + Dsui_2455 0.34 +1.8
2,613,792 + Dsui_2455 0.34 +0.1
2,613,794 + Dsui_2455 0.34 -1.7
2,613,902 + Dsui_2455 0.42 +0.8
2,613,903 + Dsui_2455 0.42 +0.8
2,613,907 + Dsui_2455 0.42 +1.3
2,614,159 + Dsui_2455 0.60 +0.8
2,614,167 - -3.0
2,614,231 + Dsui_2455 0.65 +0.8
2,614,248 + Dsui_2455 0.66 +1.3
2,614,275 + Dsui_2455 0.68 +1.0
2,614,314 + Dsui_2455 0.70 +0.4
2,614,393 + Dsui_2455 0.76 +1.6
2,614,460 - +0.3
2,614,713 + +1.2
2,614,721 + +0.9
2,614,721 - -0.2
2,614,723 + +0.6
2,614,754 + +0.3
2,614,762 - Dsui_2456 0.12 +1.5
2,614,762 - Dsui_2456 0.12 -0.2
2,614,764 + Dsui_2456 0.13 +0.7
2,614,787 + Dsui_2456 0.22 +0.9
2,614,789 + Dsui_2456 0.22 +0.9
2,614,963 + Dsui_2456 0.86 +1.2
2,614,963 + Dsui_2456 0.86 +1.3
2,615,031 + -0.3
2,615,055 + +0.9
2,615,134 + -3.0
2,615,174 + -2.1
2,615,271 + Dsui_2457 0.12 -2.8
2,615,384 + Dsui_2457 0.18 -1.2
2,615,424 + Dsui_2457 0.20 -0.3
2,615,704 + Dsui_2457 0.36 +0.3
2,615,731 + Dsui_2457 0.38 -0.2
2,615,880 + Dsui_2457 0.46 -1.3
2,615,955 + Dsui_2457 0.50 -1.1

Or see this region's nucleotide sequence